Gene

KWMTBOMO11190

Pre Gene Modal

BGIBMGA012658

Annotation

PREDICTED:_CCR4-NOT_transcription_complex_subunit_11_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr19(+):276138-284934      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.743 Nuclear   Reliability : 1.044

CDS

ATGTCTCAACATCTGATTAATGAAAACAGTAAATACATACTCGATTTATTTTCCGAACAGACAGTCGATTCGCAGGGCTTAGATTCAATATGTGTTCAAGTTCAAAAAAAGTTCCCGAAGACCGATCATTTTAATCTAAGTCTGCTCCTGTCATCGCTGATTACGGGCGGAGATCTTTCACTCCCTGGGCAGCGTGTTGTTGCACTGGCTCTTCTATATGACTTCTACAAGGGAGAAAACCCATTCAGCCCATTGTTCTTGCATCTCCTAGAAGGGAAGCTGGGTCTTCTGCCTCTAGCTCCACAGGAGAGACTGTTTATAGGACAGCTGCATGGATTCTTGCCTGTAAACATTAAAGATGTTATGAAAAAATCAGCAAAACAAGTAATGATGACAGAAGTATCTCCTAAGGACCTGGAGTTTGATTACTCACCGCTGCAGGCGATTGTGGCCGAACGTTTGACTGACACCAGTGCTGTGGCCCGGGCCACTTGTTCTGCATTGATACCGCTTAGTGATGGGAGTCCACCGAACCGCCTTGCCTTGAAAGAACTGCTAGAAGCCTTGATGAGTAATGAGTATCTCCCGCTGCACCGAACGCTATCGGCCGCCGGACCCATCCCACCGCCCACGTTCCTCATCGACACCAATGATGTGCCTTTTGCTGACGAGGGCGTTTGGAAGAACTTAATAAATCGCGGCACGTATATACCGATGTATGACTCCGACTACGACGGACTGATCGGGCTCCGACCTGAGAAGATCGATAGAAGATCGCAGCCTAACCAACAGCACAAAGTCAAGGAGGAAAAAAAAGAGAAACAAGAAGAGAAGAAGGAAGATAAAGATCCTGTGTCATTAGTGAGTGAAGCTAAAGATTTGACCCAGATCGCGCTCAGGGGAGCCCTCAGTGTACAGCAACAGCAAAGACTACTGGCACTGCTGGATCAGGAACCTAACATTGTCTACGAAATAGGTGTTACACCTAACCAGCTACCGGACCTAGTCGAGAACAATCCAATGGTCGCCATATCGGTGCTTCTCAAACTGATCCACTCTCAGCACATCACGGAGTACTTCAGTGTCCTCGTCAACATGGAAATGTCGCTGCACTCCATGGAGGTGGTCAACAGGTTAACGACCTCAGTGGATTTGCCGGTGGAGTTCGTTCACCTCTACATAAGCAATTGTATTTCGACGTGTGAGACAATACGGGACAGATACATGCAAAACAGGCTCGTACGATTGGTGTGTGTCTTCCTGCAGTCGCTGATAAGGAACAAGATCATCAATGTGAAGGAGCTATTCATAGAAGTGGAAGCGTTCTGCGTTGAGTTCAGCCGGATCCGAGAGGCCGCTGCGCTGTTTCGGCTCCTGAAGCAGCTGGACTCCGGCGAGGCTGCCCACAAGGACCCCAAGGATAACTAG

Protein

MSQHLINENSKYILDLFSEQTVDSQGLDSICVQVQKKFPKTDHFNLSLLLSSLITGGDLSLPGQRVVALALLYDFYKGENPFSPLFLHLLEGKLGLLPLAPQERLFIGQLHGFLPVNIKDVMKKSAKQVMMTEVSPKDLEFDYSPLQAIVAERLTDTSAVARATCSALIPLSDGSPPNRLALKELLEALMSNEYLPLHRTLSAAGPIPPPTFLIDTNDVPFADEGVWKNLINRGTYIPMYDSDYDGLIGLRPEKIDRRSQPNQQHKVKEEKKEKQEEKKEDKDPVSLVSEAKDLTQIALRGALSVQQQQRLLALLDQEPNIVYEIGVTPNQLPDLVENNPMVAISVLLKLIHSQHITEYFSVLVNMEMSLHSMEVVNRLTTSVDLPVEFVHLYISNCISTCETIRDRYMQNRLVRLVCVFLQSLIRNKIINVKELFIEVEAFCVEFSRIREAAALFRLLKQLDSGEAAHKDPKDN

Uniprot

H9JSZ6   A0A2H1WQY9   A0A194R0X6   A0A194QFD8   A0A2A4JW04   A0A2W1BG51   + More
A0A212ELW1   A0A023F3X5   A0A1B6DGH3   A0A069DU08   A0A1B6FCN2   A0A1W4XMW0   A0A224XCB6   D6WTS3   A0A2R7W4L2   A0A0A9XZQ0   A0A0A9XWP2   A0A146M0U8   A0A067QJL2   U4U497   J3JW98   A0A1Y1LS00   A0A2P8XVN3   A0A2A3E2B0   A0A087ZXS5   A0A2J7RGU6   E2BU53   A0A1W2WI25   A0A0P5ZBF4   A0A151WNX2   V5GSH0   A0A0N7ZDX7   A0A224YPR4   A0A131Z5D1   A0A232F273   A0A0P5LNA1   A0A0P5YS75   K7J4T2   V5I0U1   A0A0P6AM58   A0A3M6UDZ7   A0A0P5RRQ0   A0A0N7ZQG8   E2AW92   A0A2R5LFQ1   A0A1E1XAN1   A0A0J7K8N7   A7RPS5   A0A0P5Z5D3   A0A151NXT5   A0A2K6G1Z7   F6RII5   A0A091I7G0   A0A2K6G1Y1   F6YYW3   F6Y9Y2   A0A091FH32   A0A3Q1IU27   A0A1A8GWG7   A0A2K5JJV6   F1STG2   A0A3Q3M163   A0A1L8HGQ5   D2HBE4   A0A3M0K0Z5   A0A2Y9D8A7   A0A3Q3D2L6   A0A1A8S278   A0A1A8QJI8   A0A091FTY0   A0A2I0UCR6   A0A226MFH1   A0A226P6N9   A0A1V4J3G9   A0A093Q3T9   A0A2I0MSY2   G1MAR3   A0A093G9Q8   A0A2I3GWI2   A0A2K5QUD7   G1RWI2   A0A2K6JQQ9   H9GCZ2   A0A2K5QUE6   A0A1A7Y2E4   A0A2K5DI19   A0A2K5DI45   A0A2K6U6N0   F6U2U4   A0A2K6E5A1   A0A2K5VMN5   A0A2I3N1D3   U3D6A6   U3JMG4   A0A3L8STH9   A0A218UWT8   A0A3Q7W118  

Pubmed

19121390    26354079    28756777    22118469    25474469    26334808    + More
18362917    19820115    25401762    26823975    24845553    23537049    22516182    28004739    29403074    20798317    28797301    26830274    28648823    20075255    25765539    30382153    28503490    17615350    22293439    18464734    12481130    15114417    20431018    30723633    27762356    20010809    24621616    23371554    21881562    19892987    25243066    30282656   

EMBL

BABH01038942    BABH01038943    ODYU01010351    SOQ55396.1    KQ461073    KPJ09496.1    + More
KQ459053    KPJ04129.1    NWSH01000536    PCG75814.1    KZ150068    PZC74099.1    AGBW02013975    OWR42475.1    GBBI01003063    JAC15649.1    GEDC01025455    GEDC01023514    GEDC01012578    JAS11843.1    JAS13784.1    JAS24720.1    GBGD01001504    JAC87385.1    GECZ01022056    JAS47713.1    GFTR01006399    JAW10027.1    KQ971352    EFA06281.1    KK854300    PTY14368.1    GBHO01019271    JAG24333.1    GBHO01019270    JAG24334.1    GDHC01006232    JAQ12397.1    KK853284    KDR08992.1    KB632095    ERL88729.1    APGK01025938    BT127516    KB740605    AEE62478.1    ENN80068.1    GEZM01049935    JAV75751.1    PYGN01001278    PSN36077.1    KZ288430    PBC25830.1    NEVH01003751    PNF40061.1    GL450581    EFN80770.1    GDIP01046020    LRGB01000725    JAM57695.1    KZS16375.1    KQ982892    KYQ49602.1    GALX01005278    JAB63188.1    GDIP01254921    JAI68480.1    GFPF01004684    MAA15830.1    GEDV01002379    JAP86178.1    NNAY01001281    OXU24507.1    GDIQ01167418    JAK84307.1    GDIP01054315    JAM49400.1    AAZX01000449    GANP01003615    JAB80853.1    GDIP01032986    JAM70729.1    RCHS01001707    RMX51900.1    GDIQ01102796    JAL48930.1    GDIP01222593    JAJ00809.1    GL443262    EFN62314.1    GGLE01004162    MBY08288.1    GFAC01002916    JAT96272.1    LBMM01011672    KMQ86707.1    DS469526    EDO46626.1    GDIP01048956    JAM54759.1    AKHW03001628    KYO41409.1    KL218306    KFP04172.1    EAAA01001446    AAMC01034846    KK718990    KFO60775.1    HAEB01016745    HAEC01007274    SBQ75412.1    AEMK02000020    DQIR01113895    DQIR01193510    HDA69371.1    CM004468    OCT95256.1    GL192657    EFB13197.1    QRBI01000120    RMC06648.1    HAEI01005885    HAEH01021265    SBS12062.1    HAEF01002966    HAEG01012936    SBR93627.1    KL447476    KFO73980.1    KZ505871    PKU43783.1    MCFN01000999    OXB54042.1    AWGT02000157    OXB75157.1    LSYS01009367    OPJ66756.1    KL671095    KFW81115.1    AKCR02000003    PKK32790.1    ACTA01122438    ACTA01130438    ACTA01138438    KL215166    KFV63607.1    ADFV01084183    AAWZ02029971    HADW01007457    HADX01002244    SBP24476.1    AQIA01016841    AHZZ02005972    AHZZ02005973    AHZZ02005974    GAMT01004081    GAMS01001307    GAMR01006305    GAMQ01003276    GAMQ01003275    GAMP01008801    JAB07780.1    JAB21829.1    JAB27627.1    JAB38575.1    JAB43954.1    AGTO01000128    QUSF01000007    RLW07705.1    MUZQ01000105    OWK58233.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000192223    + More
UP000007266    UP000027135    UP000030742    UP000019118    UP000245037    UP000242457    UP000005203    UP000235965    UP000008237    UP000076858    UP000075809    UP000215335    UP000002358    UP000275408    UP000000311    UP000036403    UP000001593    UP000050525    UP000233160    UP000002279    UP000054308    UP000008144    UP000008143    UP000052976    UP000265040    UP000233080    UP000008227    UP000261640    UP000186698    UP000269221    UP000248480    UP000264820    UP000053760    UP000198323    UP000198419    UP000190648    UP000053258    UP000053872    UP000008912    UP000053875    UP000001073    UP000233040    UP000233180    UP000001646    UP000233020    UP000233220    UP000002281    UP000233120    UP000233100    UP000028761    UP000008225    UP000016665    UP000276834    UP000197619    UP000286642   

PRIDE

H9JSZ6    F1STG2   

Pfam

PF10155   CNOT11        + More
PF00071   Ras

Interpro

IPR019312   CNOT11        + More
IPR005225   Small_GTP-bd_dom       
IPR027417   P-loop_NTPase       
IPR020849   Small_GTPase_Ras-type       
IPR001806   Small_GTPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9JSZ6   A0A2H1WQY9   A0A194R0X6   A0A194QFD8   A0A2A4JW04   A0A2W1BG51   + More
A0A212ELW1   A0A023F3X5   A0A1B6DGH3   A0A069DU08   A0A1B6FCN2   A0A1W4XMW0   A0A224XCB6   D6WTS3   A0A2R7W4L2   A0A0A9XZQ0   A0A0A9XWP2   A0A146M0U8   A0A067QJL2   U4U497   J3JW98   A0A1Y1LS00   A0A2P8XVN3   A0A2A3E2B0   A0A087ZXS5   A0A2J7RGU6   E2BU53   A0A1W2WI25   A0A0P5ZBF4   A0A151WNX2   V5GSH0   A0A0N7ZDX7   A0A224YPR4   A0A131Z5D1   A0A232F273   A0A0P5LNA1   A0A0P5YS75   K7J4T2   V5I0U1   A0A0P6AM58   A0A3M6UDZ7   A0A0P5RRQ0   A0A0N7ZQG8   E2AW92   A0A2R5LFQ1   A0A1E1XAN1   A0A0J7K8N7   A7RPS5   A0A0P5Z5D3   A0A151NXT5   A0A2K6G1Z7   F6RII5   A0A091I7G0   A0A2K6G1Y1   F6YYW3   F6Y9Y2   A0A091FH32   A0A3Q1IU27   A0A1A8GWG7   A0A2K5JJV6   F1STG2   A0A3Q3M163   A0A1L8HGQ5   D2HBE4   A0A3M0K0Z5   A0A2Y9D8A7   A0A3Q3D2L6   A0A1A8S278   A0A1A8QJI8   A0A091FTY0   A0A2I0UCR6   A0A226MFH1   A0A226P6N9   A0A1V4J3G9   A0A093Q3T9   A0A2I0MSY2   G1MAR3   A0A093G9Q8   A0A2I3GWI2   A0A2K5QUD7   G1RWI2   A0A2K6JQQ9   H9GCZ2   A0A2K5QUE6   A0A1A7Y2E4   A0A2K5DI19   A0A2K5DI45   A0A2K6U6N0   F6U2U4   A0A2K6E5A1   A0A2K5VMN5   A0A2I3N1D3   U3D6A6   U3JMG4   A0A3L8STH9   A0A218UWT8   A0A3Q7W118  

KEGG

101738122    no KO assigned | (RefSeq) CCR4-NOT transcription complex subunit 11

GO

GO:0030014   GO:0016020   GO:0005525   GO:0003924   GO:0007165   GO:0016021  

PANTHER

PTHR15975  

Length:

475

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.40887

Exp number, first 60 AAs:

0.30085

Total prob of N-in:

0.02199

outside

1  -  475

 

 

Pi

206.024655

Theta

168.809876

Tajima's D

0.940453

CLR

0.06427

CSRT

0.64276786160692

Interpretation

Uncertain