Silkworm Genome Informatics Database

Gene

KWMTBOMO11186

Pre Gene Modal

BGIBMGA012637

Annotation

PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]

Location

Bomo_Chr19(-):196779-197647 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.843

CDS

ATGCAGCTCCACGTGCTAGGAATGATACTCCTAGTTATCCTCATGAAGTACCGGAGTGCTACCGCTCTCGTCCTGATGATCTTCATGGCTGGTCCTGCAGCAGCAACGGGCTTCGTCGTGTACTGGCACGACCTCATGCCAATTGCAACTGCTTATTCGCCGGAGCTTATCCGAACGATATTCGCTGGATCTGAGATCCTGTCGCTGGTGCTGCTGCCTTTCTGGATGAACCTGCCCGGCTACATCGGGGGCGTGGCGGTGGCCTTCCTTCTGTACCATAACCAGACGAGCGGGAACAAGCTGGCCAGGAATATGGTACTTTTTTTTATTGTTTAG

Protein

MQLHVLGMILLVILMKYRSATALVLMIFMAGPAAATGFVVYWHDLMPIATAYSPELIRTIFAGSEILSLVLLPFWMNLPGYIGGVAVAFLLYHNQTSGNKLARNMVLFFIV

Catalytic Activity

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.

Uniprot

H9JSX5 A0A2A4JEH1 A0A2W1BMJ8 A0A2H1WCF8 A0A212FGA7 A0A194QVJ9 + More
A0A194QF68 A0A2W1BRV2 A0A182PUZ7 A0A2H1WPD1 A0A182R4J9 A0A182R1B6 A0A182WLD5 A0A0N0PCP5 A0A2A4K959 A0A212ETZ7 Q7QIT8 A0A0L7LDQ8 A0A1S4GUU3 A0A182KQ82 A0A182TKI8 A0A182MV59 A0A182VP89 A0A182K0Z6 A0A182WWU1 A0A182I2D7

Pubmed

19121390 28756777 22118469 26354079 12364791 26227816 + More
20966253

EMBL

BABH01038932 NWSH01001667 PCG70475.1 KZ150068 PZC74096.1 ODYU01007420 + More
SOQ50174.1 AGBW02008687 OWR52781.1 KQ461073 KPJ09497.1 KQ459053 KPJ04127.1 KZ149997 PZC75396.1 ODYU01010080 SOQ54931.1 AXCN02000448 AXCN02000449 KQ460635 KPJ13420.1 NWSH01000045 PCG80260.1 AGBW02012502 OWR44975.1 AAAB01008807 EAA04081.4 JTDY01001557 KOB73540.1 AXCM01001275 APCN01000146

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053268 UP000075885 + More
UP000075900 UP000075886 UP000075920 UP000007062 UP000037510 UP000075882 UP000075902 UP000075883 UP000075903 UP000075881 UP000076407 UP000075840

PRIDE

H9JSX5

Pfam

PF01757   Acyl_transf_3        + More
PF00632   HECT
PF00397   WW
PF00168   C2

Interpro

IPR002656   Acyl_transf_3        + More
IPR000569   HECT_dom
IPR035983   Hect_E3_ubiquitin_ligase
IPR035892   C2_domain_sf
IPR036020   WW_dom_sf
IPR001202   WW_dom
IPR000008   C2_dom

SUPFAM

SSF56204 SSF56204 + More
SSF51045 SSF51045

Gene 3D

2.60.40.150

CDD

cd00201 WW
cd00078 HECTc

ProteinModelPortal

H9JSX5 A0A2A4JEH1 A0A2W1BMJ8 A0A2H1WCF8 A0A212FGA7 A0A194QVJ9 + More
A0A194QF68 A0A2W1BRV2 A0A182PUZ7 A0A2H1WPD1 A0A182R4J9 A0A182R1B6 A0A182WLD5 A0A0N0PCP5 A0A2A4K959 A0A212ETZ7 Q7QIT8 A0A0L7LDQ8 A0A1S4GUU3 A0A182KQ82 A0A182TKI8 A0A182MV59 A0A182VP89 A0A182K0Z6 A0A182WWU1 A0A182I2D7

KEGG

101740410 no KO assigned | (RefSeq) nose resistant to fluoxetine protein 6-like

GO

GO:0016747 GO:0016021 GO:0004842

Length:

111

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.54339

Exp number, first 60 AAs:

22.82663

Total prob of N-in:

0.94845

POSSIBLE N-term signal

sequence

inside

1 - 19

TMhelix

20 - 42

outside

43 - 70

TMhelix

71 - 93

inside

94 - 111

Pi

62.406718

Theta

79.210114

Tajima's D

0.476458

CLR

112.611029

CSRT

0.504074796260187

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics