Silkworm Genome Informatics Database

Gene

KWMTBOMO11185

Pre Gene Modal

BGIBMGA012637

Annotation

PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]

Location

Bomo_Chr19(-):194739-196007 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 3.746

CDS

ATGTCATTCAACGTGATTTTCCACGCCGCGTTGTTTGTCGGCTTGGGCGTGACGCTGGGCGGGAGAGTGTTCCTCCGGACGGCGTGGCCGCCCTGGGCCGCCGCCCTCTACGCGGCTCTGGACCGGACCCTGGTCGCTGTGTGCTTCAATCTCTTCCTACTCGGTTGCTTCAGCCGATGTAAATCGTTAGTACGAGACGCGCTGGAATGGCGCGGCTTCCACGCTCTGGGCAGGCTCTCGTACTGCGTGTTCCTGGTGCACTTCACGGTCCTTAGGCTCACGATGGCAGAGAACACCCACGTGGGACACATCAGTGTGTTCTCATTAGTAAGTGAATAA

Protein

MSFNVIFHAALFVGLGVTLGGRVFLRTAWPPWAAALYAALDRTLVAVCFNLFLLGCFSRCKSLVRDALEWRGFHALGRLSYCVFLVHFTVLRLTMAENTHVGHISVFSLVSE

Catalytic Activity

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.

Uniprot

H9JSX5 A0A194QF68 A0A2H1WCF8 A0A2W1BMJ8 A0A194QVJ9 A0A2A4JEH1 + More
A0A212FGA7 A0A194QKE6 H9JW27

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01038932 KQ459053 KPJ04127.1 ODYU01007420 SOQ50174.1 KZ150068 + More
PZC74096.1 KQ461073 KPJ09497.1 NWSH01001667 PCG70475.1 AGBW02008687 OWR52781.1 KQ459054 KPJ03931.1 BABH01025581

Proteomes

UP000005204 UP000053268 UP000053240 UP000218220 UP000007151

PRIDE

H9JSX5 H9JW27

Pfam

PF01757   Acyl_transf_3        + More
PF00632   HECT
PF00397   WW
PF00168   C2

Interpro

IPR002656   Acyl_transf_3        + More
IPR000569   HECT_dom
IPR035983   Hect_E3_ubiquitin_ligase
IPR035892   C2_domain_sf
IPR036020   WW_dom_sf
IPR001202   WW_dom
IPR000008   C2_dom

SUPFAM

SSF56204 SSF56204 + More
SSF51045 SSF51045

Gene 3D

2.60.40.150

CDD

cd00201 WW
cd00078 HECTc

ProteinModelPortal

H9JSX5 A0A194QF68 A0A2H1WCF8 A0A2W1BMJ8 A0A194QVJ9 A0A2A4JEH1 + More
A0A212FGA7 A0A194QKE6 H9JW27

KEGG

101740410 no KO assigned | (RefSeq) nose resistant to fluoxetine protein 6-like

GO

GO:0016747 GO:0016021 GO:0004842

Length:

112

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

58.55258

Exp number, first 60 AAs:

42.57851

Total prob of N-in:

0.91906

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 25

outside

26 - 34

TMhelix

35 - 57

inside

58 - 112

Pi

176.936991

Theta

118.169173

Tajima's D

1.585159

CLR

10.589313

CSRT

0.809209539523024

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics