Gene

KWMTBOMO11183

Pre Gene Modal

BGIBMGA012638

Annotation

PREDICTED:_guanine_nucleotide_exchange_factor_subunit_Rich_[Bombyx_mori]

Location

Bomo_Chr19(-):148861-166335      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.027 Extracellular   Reliability : 1.23

CDS

ATGTATTTTCCGATTGGTTGGCCAAAAGTTTTGAAGAACCTAACTGATGATAATCAAATTATTAAACAGATCGTGTCAAATAGAGACAAAGTACTGTTCGCAGTGCTTACGGATGACTGTCTCATGGTATGGTTCTGTAAGCCGACTCTACCAATAGTTTACCACAAAAGAAGTACAGAATCATTGCAAAGACTTGGTGTTAATGTTGGTGTCGAATGGAAACCAGATTCATCTATGATATGTATTTCAACATCAGAAGGCCACCTTATTCTCTATAACGTAGAGACGCTCAGTGATCAAACAGCATACCAGCAGTTTGATCCTCCAACAGCAAGTCTCCGACGAGACTCAGCTGAGCTTTTTGTTAAGGAAGTAATACCATCACTTAAAATATCATTGTTCAAAGAAATCTTAGTATGGGATGGTCAGATCACCCGAATGTGTTGCATATCTGGTACAGAAATCCTAGTTTGTACTACACGAGCACATCTGTTAAGGTACAGATGGGACGGTACACAGAACCGCGATTACTGTTTGGACTTGGGCCGTATACCATTCTCTATAAATCAACAGGTTTCTAAAGCCGAACCGATAATCGAGGATAACACCCACGTGAATGACATAGAGTACTCTCCTCTTGTCTGCGGCTTTGGTATAACACTCAATGATGGCAGAGCAGCGTATCTCACCGCTCCCAACCTCAAGTTCGATCCTAATGCAGTCCAGGGTATTTGGGCCCAGGGTATCGATGATGCGACGTGCACTAGAGTCAATCACAAGTTTAGGCTCATCGCCATCGGAAGACGGAATTCTCAAGTGGAGGTGTTCACGATAGACGAGGCGACTGGCGGACTGGAGCTGTCGCATACGATGGTGCTCAGCTCCAAGGACTTTCCCGGCGACCCCGGACCAGTCAAATGCATCAGGTGGACGGCAGACGGTCGCACCGTGGCAGTGAGCTGGTCTCGCGGCGGCGTGTCGGCGTGGAGCACGTTCGGGGCGCTGCTGATGTGCTCCCTGGCCTGGGACTACGGGCTCAGCCAGGACCTCGGCAGACACGACCCCCTGCTCGTCACCAGTATGGAATGGGCCACGGAGGGCTACCAGCTGTGGATGGTGAAAGTGGAGAACGATTCCAGAACGAATCTCATACAGTTGGACTTCGTGAAGAGTCCGCTAAGCGTCAACCCGTGCATGAGCAACCAGCGCCACCTGTACCTGCAAGCCGACGACAAACTCTACATAAACATAGAGGACAATCTCACGAAGCGCACCAAGATCCCGATAATCGACTCCTCGGCGGACTCTTACCAGACGGAGAACGGGTACCAGGAACCCGCGGCCCTGGACTACGAGCCCCCCAGCAACTACAAGGAGTTCGTCGACGACAACGAGTGCAGGAAGCAGTGGATCGTGCTGCCGCTTCCTGCCACCTACATAGCCACTAACTGGCCTCTGCGGTACAGCGCGCTGGAGGGGGGCGGTGCGCACGTGTGCGTGGCGGGGCGCGCGGGGCTGGCGCACTACAGCCGCGCCGCGCGCCGCTGGAAGCTGTTCGGGAACGAGGCCCACGAGAAGGGCTTCCTCGTCACCGGCGGCATGCTCTGGTGGAGGGACCGCATCGTCGTGGGCTGCTACAACGACCTGGACGGCCACGACGAGGTCCGCTTCTACCCTCGCGAGTGCCGCCTCGACAACAAGTTCGCGAAGATAGTCCGCGTGCAGGCGCAGGTCTTCGCCCTGGACATGCTCGACGACCAGCTGGTGGTTTTCGGGGCGGACGCACTCGTCACTATATACGAGCTGACGTGTGCGGATAGTGCCGGCGACATCGACATGCGCTGCGTGCAGGCGGTGGACGTGTCGGCGCTGTCGCACCCGGCGTGCGTGGTGTCGGCGGCGCTGTGCCGGCTGCAGCACCCCCAGCAGCACCGCGCGCGCAGCCCCGCCGCGCCGGACTCGCTGGTCATAAACGCGAGCGGCAGACTCATGATGGTGCAGAGAGAAGAGTACGACGTCGACGAAGACAACAATCCGTGCACTCCCACAGATGCTAAACGACTAATGAGCTACCGTTATGACACGTTTAAATCTGAAGGAACACTAAATTAA

Protein

MYFPIGWPKVLKNLTDDNQIIKQIVSNRDKVLFAVLTDDCLMVWFCKPTLPIVYHKRSTESLQRLGVNVGVEWKPDSSMICISTSEGHLILYNVETLSDQTAYQQFDPPTASLRRDSAELFVKEVIPSLKISLFKEILVWDGQITRMCCISGTEILVCTTRAHLLRYRWDGTQNRDYCLDLGRIPFSINQQVSKAEPIIEDNTHVNDIEYSPLVCGFGITLNDGRAAYLTAPNLKFDPNAVQGIWAQGIDDATCTRVNHKFRLIAIGRRNSQVEVFTIDEATGGLELSHTMVLSSKDFPGDPGPVKCIRWTADGRTVAVSWSRGGVSAWSTFGALLMCSLAWDYGLSQDLGRHDPLLVTSMEWATEGYQLWMVKVENDSRTNLIQLDFVKSPLSVNPCMSNQRHLYLQADDKLYINIEDNLTKRTKIPIIDSSADSYQTENGYQEPAALDYEPPSNYKEFVDDNECRKQWIVLPLPATYIATNWPLRYSALEGGGAHVCVAGRAGLAHYSRAARRWKLFGNEAHEKGFLVTGGMLWWRDRIVVGCYNDLDGHDEVRFYPRECRLDNKFAKIVRVQAQVFALDMLDDQLVVFGADALVTIYELTCADSAGDIDMRCVQAVDVSALSHPACVVSAALCRLQHPQQHRARSPAAPDSLVINASGRLMMVQREEYDVDEDNNPCTPTDAKRLMSYRYDTFKSEGTLN

Uniprot

H9JSX6   A0A2A4JPU4   A0A194QW99   A0A194QKP5   A0A2W1BLK6   A0A2A4JRI2   + More
A0A212ELD2   D6WR10   N6TB50   A0A1Y1MD39   A0A0T6BBV4   A0A2J7PZN6   A0A2J7PZN5   A0A1Y1MID3   A0A2J7PZP2   A0A2J7PZN9   A0A067R216   U4UCH4   A0A1B6JSR6   E0VMH4   A0A146L4R2   E2BS58   A0A158NCP9   A0A026W775   A0A0A9X690   A0A2A3E3I9   E2A253   A0A195EM28   A0A151XF69   A0A154PQB8   A0A195CG82   A0A1B0GI83   B0X7B2   A0A0C9QTL7   A0A182GBV1   A0A182J2K8   A0A023F237   A0A2M3ZFZ4   A0A2M4A3U3   A0A2M4A3V0   A0A182W8I4   A0A1Q3F8T6   Q16R39   A0A182R1Q9   A0A182Y631   A0A182V875   A0A310SQP1   A0A088A5N1   A0A182PVQ3   A0A2M4B8Q5   T1IEJ7   A0A182KL95   A0A2M4B8U4   A0A2M4B8V0   A0A2M4B8U0   A0A2M4B9B1   F4WFA9   W5JD25   A0A182QUP6   A0A182HR19   A0A1B6MD31   Q7PME0   A0A0J7L2N1   A0A232EXC7   K7IUI6   A0A336KTY2   E9ILM8   A0A182KAP4   A0A0P6ICH1   A0A0P6BMH6   A0A0P5QQ26   A0A0P5RJB6   A0A164PMR7   A0A0P5SPE9   A0A0P5AGB3   A0A2S2Q790   A0A336KX24   A0A2H8TJF4   J9JZW0   A0A1D2NEH6   A0A0L7R2R7   A0A0P5DXS2   A0A1J1ITC5   A0A0P5F708   W8BI14   Q29DM2   A0A1I8PS17   A0A195FA41   A0A195BWT8   A0A0P5UV40   A0A0L0BXD3   A0A0K2TTD8   A0A3B0JZ49   A0A034VQQ1   A0A1I8MER0   A0A0A1X5A0   A0A0K8VH75   B4IXM9  

Pubmed

19121390    26354079    28756777    22118469    18362917    19820115    + More
23537049    28004739    24845553    20566863    26823975    20798317    21347285    24508170    30249741    25401762    26483478    25474469    17510324    25244985    20966253    21719571    20920257    23761445    12364791    28648823    20075255    21282665    27289101    24495485    15632085    17994087    23185243    26108605    25348373    25315136    25830018   

EMBL

BABH01038929    BABH01038930    NWSH01000823    PCG74021.1    KQ461073    KPJ09579.1    + More
KQ459053    KPJ04026.1    KZ149982    PZC75788.1    PCG74022.1    AGBW02014073    OWR42310.1    KQ971351    EFA06481.2    APGK01036957    APGK01036958    KB740945    ENN77494.1    GEZM01034705    GEZM01034704    JAV83654.1    LJIG01002152    KRT84788.1    NEVH01020333    PNF21795.1    PNF21797.1    GEZM01034703    JAV83656.1    PNF21796.1    PNF21798.1    KK852981    KDR12929.1    KB632197    ERL90008.1    GECU01005450    JAT02257.1    DS235308    EEB14580.1    GDHC01015145    JAQ03484.1    GL450151    EFN81450.1    ADTU01012007    KK107389    QOIP01000014    EZA51471.1    RLU15024.1    GBHO01029261    JAG14343.1    KZ288400    PBC26275.1    GL435917    EFN72501.1    KQ978691    KYN29268.1    KQ982215    KYQ58930.1    KQ435022    KZC13927.1    KQ977791    KYM99727.1    AJWK01013571    AJWK01013572    DS232445    EDS41856.1    GBYB01004022    JAG73789.1    JXUM01053351    KQ561772    KXJ77594.1    GBBI01003075    JAC15637.1    GGFM01006654    MBW27405.1    GGFK01002163    MBW35484.1    GGFK01002162    MBW35483.1    GFDL01011064    JAV23981.1    CH477725    EAT36871.2    KQ760116    OAD61956.1    GGFJ01000278    MBW49419.1    ACPB03017602    GGFJ01000281    MBW49422.1    GGFJ01000280    MBW49421.1    GGFJ01000279    MBW49420.1    GGFJ01000277    MBW49418.1    GL888115    EGI67160.1    ADMH02001511    ETN62247.1    AXCN02001981    APCN01001632    GEBQ01006136    JAT33841.1    AAAB01008980    EAA13960.5    LBMM01001102    KMQ96923.1    NNAY01001765    OXU22979.1    AAZX01012676    UFQS01000941    UFQT01000941    SSX07891.1    SSX28125.1    GL764129    EFZ18303.1    GDIQ01007515    JAN87222.1    GDIP01012913    JAM90802.1    GDIQ01117570    JAL34156.1    GDIQ01119111    JAL32615.1    LRGB01002580    KZS06977.1    GDIQ01101365    JAL50361.1    GDIP01199261    JAJ24141.1    GGMS01004395    MBY73598.1    UFQS01000930    UFQT01000930    SSX07817.1    SSX28051.1    GFXV01001613    MBW13418.1    ABLF02020910    LJIJ01000067    ODN03670.1    KQ414665    KOC65128.1    GDIP01150973    JAJ72429.1    CVRI01000057    CRL02358.1    GDIP01150972    JAJ72430.1    GAMC01009982    JAB96573.1    CH379070    EAL30392.1    KRT08891.1    KRT08892.1    KQ981727    KYN36914.1    KQ976396    KYM93047.1    GDIP01124928    JAL78786.1    JRES01001184    KNC24707.1    HACA01011551    CDW28912.1    OUUW01000002    SPP76388.1    GAKP01014173    JAC44779.1    GBXI01008372    GBXI01005517    JAD05920.1    JAD08775.1    GDHF01014065    JAI38249.1    CH916366    EDV97491.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000007266    + More
UP000019118    UP000235965    UP000027135    UP000030742    UP000009046    UP000008237    UP000005205    UP000053097    UP000279307    UP000242457    UP000000311    UP000078492    UP000075809    UP000076502    UP000078542    UP000092461    UP000002320    UP000069940    UP000249989    UP000075880    UP000075920    UP000008820    UP000075900    UP000076408    UP000075903    UP000005203    UP000075885    UP000015103    UP000075882    UP000007755    UP000000673    UP000075886    UP000075840    UP000007062    UP000036403    UP000215335    UP000002358    UP000075881    UP000076858    UP000007819    UP000094527    UP000053825    UP000183832    UP000001819    UP000095300    UP000078541    UP000078540    UP000037069    UP000268350    UP000095301    UP000001070   

PRIDE

H9JSX6   

Pfam

PF07064   RIC1

Interpro

IPR040096   Ric1        + More
IPR036322   WD40_repeat_dom_sf       
IPR009771   Ribosome_control_1       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011044   Quino_amine_DH_bsu       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001936   RasGAP_dom       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50969   SSF50969       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JSX6   A0A2A4JPU4   A0A194QW99   A0A194QKP5   A0A2W1BLK6   A0A2A4JRI2   + More
A0A212ELD2   D6WR10   N6TB50   A0A1Y1MD39   A0A0T6BBV4   A0A2J7PZN6   A0A2J7PZN5   A0A1Y1MID3   A0A2J7PZP2   A0A2J7PZN9   A0A067R216   U4UCH4   A0A1B6JSR6   E0VMH4   A0A146L4R2   E2BS58   A0A158NCP9   A0A026W775   A0A0A9X690   A0A2A3E3I9   E2A253   A0A195EM28   A0A151XF69   A0A154PQB8   A0A195CG82   A0A1B0GI83   B0X7B2   A0A0C9QTL7   A0A182GBV1   A0A182J2K8   A0A023F237   A0A2M3ZFZ4   A0A2M4A3U3   A0A2M4A3V0   A0A182W8I4   A0A1Q3F8T6   Q16R39   A0A182R1Q9   A0A182Y631   A0A182V875   A0A310SQP1   A0A088A5N1   A0A182PVQ3   A0A2M4B8Q5   T1IEJ7   A0A182KL95   A0A2M4B8U4   A0A2M4B8V0   A0A2M4B8U0   A0A2M4B9B1   F4WFA9   W5JD25   A0A182QUP6   A0A182HR19   A0A1B6MD31   Q7PME0   A0A0J7L2N1   A0A232EXC7   K7IUI6   A0A336KTY2   E9ILM8   A0A182KAP4   A0A0P6ICH1   A0A0P6BMH6   A0A0P5QQ26   A0A0P5RJB6   A0A164PMR7   A0A0P5SPE9   A0A0P5AGB3   A0A2S2Q790   A0A336KX24   A0A2H8TJF4   J9JZW0   A0A1D2NEH6   A0A0L7R2R7   A0A0P5DXS2   A0A1J1ITC5   A0A0P5F708   W8BI14   Q29DM2   A0A1I8PS17   A0A195FA41   A0A195BWT8   A0A0P5UV40   A0A0L0BXD3   A0A0K2TTD8   A0A3B0JZ49   A0A034VQQ1   A0A1I8MER0   A0A0A1X5A0   A0A0K8VH75   B4IXM9  

KEGG

101740281    K20476 RAB6A-GEF complex partner protein 1 | (RefSeq) guanine nucleotide exchange factor subunit Ric

GO

GO:0034066   GO:0006886   GO:0017137   GO:0005829   GO:0042147   GO:0017112   GO:0000139   GO:0016021   GO:0043087   GO:0050808   GO:0045467   GO:0060078   GO:0031410   GO:0043547   GO:0032483   GO:0007411   GO:0035418   GO:0005515   GO:0006810   GO:0006468   GO:0007169   GO:0016020   GO:0006811   GO:0005622   GO:0003824  

PANTHER

PTHR22746  

Length:

703

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0874300000000001

Exp number, first 60 AAs:

0.04419

Total prob of N-in:

0.00295

outside

1  -  703

 

 

Pi

262.35431

Theta

190.797203

Tajima's D

1.113028

CLR

0.100025

CSRT

0.68141592920354

Interpretation

Uncertain