Gene

KWMTBOMO11178

Pre Gene Modal

BGIBMGA012640

Annotation

PREDICTED:_myosin-7B_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr19(-):90227-118355      View in EpiBrowser

Full name

Protein bicaudal D      

Location in the cell

Cytoplasmic   Reliability : 2.446

CDS

ATGGCAGCCACGGCTCACAGCGAGCTATCGGTGGCCGAGCTAAAGGCTGAGATCGAGAGGCTTGGCCGAGAGCTCGACCAGGCAAGTAGTGAGAAGATACAATCGGCTCAGCTTGGCCTGGTACTCTTGGAAGAAAAAAGCGTCCTGCAGCAACGATGCGACGAACTGGAAATCCTGTACGAGAACACCAAGCACGACTTGGAGATAACACAAGAGGCTTTAATGAAATTGGACTCGTCGCAGAAGGTAACAACGCAGAGTGGTATAGAACAAGAGAATGCCCTCCTCAACGAGTCGGCGGCGATGGAGAGCTCCCTCACTCTACAGATACTTGAACTGGAGAGCGAAACTAAACAGCTCCGCCACGAGCTGGACCGAGTGGTGAGTGAACGCGACCGTCTCCTGACGGAAAGTTCGGAGCTTGGCGCCGACAAAGCGACGCGCGAGTCCGAACGCGCCGCCCTAAGAGCCGAGCTGCGGGAGGCGCGGCGGCGAGAGCAGCGGCAGCTCAGCGACATCACCGACCTGGAGGATGAGAACATCTCGCTACAGAAGCAAGTCTCAGCACTGAGGTCGTCGCAGGTGGAATTCGAAGGATTGAAATATGAAGCTCGTCAACTCCGCGAGGAGGCGGAGGCGGCCCGCGCGACCGCCGAGGAGACGGCGGCCCTGCGGCGCATCGCCGAGCGGCAGCTGGCCGAGGCGCTGGAGGCGCTGCAGGCTGAGAGGGAAGCCAAGTTCGCCGCCAAGAAGGAGCTGGACGCGCACCTCAGCAAGGAGGCGGCGTACAACATTACGAACCTCGCCTACACTATCCGAGGTATGCCCGAGGACGGCACGGAGGACGAGAGCGAGCCCGGCGGCTCATCCTCGGCGGAGCTGGCCACCGCCATGGCGGACCACCACGCCGACTTATTCTCGGAAGTGCATCTGCACGAAATATCGCGACTCGAAAAACAATTAGAACAAGCCCACAGCGAAAACGTATGTCGTTTTATGAATACGCTTTTATTAACTTCAGACGTATGTATTATAATAATATGTTTGTAA

Protein

MAATAHSELSVAELKAEIERLGRELDQASSEKIQSAQLGLVLLEEKSVLQQRCDELEILYENTKHDLEITQEALMKLDSSQKVTTQSGIEQENALLNESAAMESSLTLQILELESETKQLRHELDRVVSERDRLLTESSELGADKATRESERAALRAELREARRREQRQLSDITDLEDENISLQKQVSALRSSQVEFEGLKYEARQLREEAEAARATAEETAALRRIAERQLAEALEALQAEREAKFAAKKELDAHLSKEAAYNITNLAYTIRGMPEDGTEDESEPGGSSSAELATAMADHHADLFSEVHLHEISRLEKQLEQAHSENVCRFMNTLLLTSDVCIIIICL

Description

This protein is essential for differentiation. It may play a role in localizing of Nanos (a maternal determinant) activity in oocytes. During oogenesis, plays a specific role, together with Rab6 but independently of Sec5, in the polarization of the oocyte microtubule cytoskeleton, in oskar mRNA localization and in the anterodorsal secretion of grk.

Subunit

Interacts (via C-terminal domain) with Rab6.

Similarity

Belongs to the BicD family.

Keywords

3D-structure   Coiled coil   Complete proteome   Cytoplasm   Cytoskeleton   Developmental protein   Phosphoprotein   Reference proteome  

Feature

chain  Protein bicaudal D

Uniprot

A0A2H1WQT2   A0A2W1BND1   A0A194QVL5   A0A3S2M4U0   A0A2A4JRH7   A0A212ELE6   + More
A0A1E1W0Q1   A0A0K8TSE8   A0A182J637   A0A1S4H3C6   A0A084WD44   A0A182N8P6   A0A182QLD7   A0A1Y1KH97   A0A182YHB5   A0A2M3Z126   A0A1L8DVM5   D6WU88   W5JCL6   A0A2M4AA30   A0A1Q3FX19   A0A182UTV6   A0A2M4AA84   A0A182P8C0   Q5TNU2   A0A182I0P8   A0A182UCL3   A0A2M4BEJ8   A0A1Q3FX74   A0A182JVU3   A0A2M4BEB4   A0A1Y9G8A0   U5EXT2   A0A182XB54   U5EWA3   A0A182R6U7   A0A182MRC0   A0A182VSZ4   E2A8B5   V5FZ53   A0A087ZVA1   A0A0J7KVR7   A0A336LXL5   A0A0M8ZV35   U4UHW6   N6UI11   A0A023EXU0   A0A0T6B5Q4   E2BYY7   A0A2A3E8G2   A0A154PQC6   F4WVA7   A0A151WJS1   A0A195BTN5   A0A158NNV2   A0A151ICA5   A0A151IWU5   A0A182SK98   E9IHB7   A0A195EW12   A0A1S4F960   Q17BK6   A0A1J1IW01   T1PE42   A0A1I8MNW8   B4I5A8   A0A1B0FHP1   A0A0C9Q6X2   A0A0C9R140   A0A0L0C254   A0A1I8P4G4   M9NDR2   M9PDL9   P16568   B4Q7Y4   A0A069DX56   A0A0M4E6J5   B4MTV8   A0A023F289   A0A0J9R366   M9PDB8   A0A3B0JCE5   B4P8R6   A0A3B0K362   B4JB50   B4GQC4   B5DJ67   A0A026WQY3   A0A1W4V050   A0A3B0JDA7   B3NMH2   A0A1B6C1N9   A0A067QUS5   A0A2J7RHA4   B4KHC2   B4LU99   B3MMI0  

Pubmed

28756777    26354079    22118469    26369729    12364791    14747013    + More
17210077    24438588    28004739    25244985    18362917    19820115    20920257    23761445    20798317    23537049    24945155    21719571    21347285    21282665    17510324    25315136    17994087    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    2590944    2576013    12537569    11546740    17329360    17827179    17372656    18327897    26334808    25474469    22936249    17550304    15632085    24508170    24845553   

EMBL

ODYU01010336    SOQ55367.1    KZ149982    PZC75781.1    KQ461073    KPJ09578.1    + More
RSAL01000034    RVE51420.1    NWSH01000823    PCG74020.1    AGBW02014073    OWR42314.1    GDQN01010477    JAT80577.1    GDAI01000321    JAI17282.1    AAAB01008980    EAL39298.3    ATLV01022933    KE525338    KFB48138.1    AXCN02001858    GEZM01086115    JAV59771.1    GGFM01001455    MBW22206.1    GFDF01003608    JAV10476.1    KQ971352    EFA07458.1    ADMH02001551    ETN62092.1    GGFK01004326    MBW37647.1    GFDL01003019    JAV32026.1    GGFK01004331    MBW37652.1    APCN01005229    GGFJ01002321    MBW51462.1    GFDL01003022    JAV32023.1    GGFJ01002216    MBW51357.1    GANO01002383    JAB57488.1    GANO01001510    JAB58361.1    AXCM01000009    GL437526    EFN70328.1    GALX01005506    JAB62960.1    LBMM01002789    KMQ94359.1    UFQS01000279    UFQT01000279    SSX02329.1    SSX22704.1    KQ435830    KOX71735.1    KB632331    ERL92622.1    APGK01019266    KB740098    ENN81385.1    GAPW01000259    JAC13339.1    LJIG01009629    KRT82697.1    GL451531    EFN79105.1    KZ288348    PBC27496.1    KQ435007    KZC13574.1    GL888384    EGI61873.1    KQ983031    KYQ48119.1    KQ976417    KYM89784.1    ADTU01021805    KQ978062    KYM97715.1    KQ980843    KYN12291.1    GL763196    EFZ20056.1    KQ981953    KYN32455.1    CH477320    EAT43661.1    CVRI01000059    CRL03756.1    KA646964    AFP61593.1    CH480822    EDW55564.1    CCAG010020381    GBYB01009858    JAG79625.1    GBYB01009859    JAG79626.1    JRES01000986    KNC26428.1    AE014134    AFH03731.1    AGB93065.1    M31684    X51652    AY069452    CM000361    EDX05317.1    GBGD01000612    JAC88277.1    CP012523    ALC39984.1    CH963852    EDW75547.2    GBBI01002995    JAC15717.1    CM002910    KMY90712.1    AGB93066.1    OUUW01000004    SPP80047.1    CM000158    EDW90174.2    SPP80046.1    CH916368    EDW03942.1    CH479187    EDW39796.1    CH379060    EDY70344.2    KK107128    EZA58373.1    SPP80045.1    CH954179    EDV54843.1    GEDC01029890    JAS07408.1    KK853243    KDR09465.1    NEVH01003746    PNF40214.1    CH933807    EDW11186.2    CH940649    EDW64086.2    CH902620    EDV30926.2   

Proteomes

UP000053240    UP000283053    UP000218220    UP000007151    UP000075880    UP000007062    + More
UP000030765    UP000075884    UP000075886    UP000076408    UP000007266    UP000000673    UP000075903    UP000075885    UP000075840    UP000075902    UP000075881    UP000069272    UP000076407    UP000075900    UP000075883    UP000075920    UP000000311    UP000005203    UP000036403    UP000053105    UP000030742    UP000019118    UP000008237    UP000242457    UP000076502    UP000007755    UP000075809    UP000078540    UP000005205    UP000078542    UP000078492    UP000075901    UP000078541    UP000008820    UP000183832    UP000095301    UP000001292    UP000092444    UP000037069    UP000095300    UP000000803    UP000000304    UP000092553    UP000007798    UP000268350    UP000002282    UP000001070    UP000008744    UP000001819    UP000053097    UP000192221    UP000008711    UP000027135    UP000235965    UP000009192    UP000008792    UP000007801   

PRIDE

M9NDR2    P16568   

Pfam

PF09730   BicD

Interpro

IPR018477   BICD       

ProteinModelPortal

A0A2H1WQT2   A0A2W1BND1   A0A194QVL5   A0A3S2M4U0   A0A2A4JRH7   A0A212ELE6   + More
A0A1E1W0Q1   A0A0K8TSE8   A0A182J637   A0A1S4H3C6   A0A084WD44   A0A182N8P6   A0A182QLD7   A0A1Y1KH97   A0A182YHB5   A0A2M3Z126   A0A1L8DVM5   D6WU88   W5JCL6   A0A2M4AA30   A0A1Q3FX19   A0A182UTV6   A0A2M4AA84   A0A182P8C0   Q5TNU2   A0A182I0P8   A0A182UCL3   A0A2M4BEJ8   A0A1Q3FX74   A0A182JVU3   A0A2M4BEB4   A0A1Y9G8A0   U5EXT2   A0A182XB54   U5EWA3   A0A182R6U7   A0A182MRC0   A0A182VSZ4   E2A8B5   V5FZ53   A0A087ZVA1   A0A0J7KVR7   A0A336LXL5   A0A0M8ZV35   U4UHW6   N6UI11   A0A023EXU0   A0A0T6B5Q4   E2BYY7   A0A2A3E8G2   A0A154PQC6   F4WVA7   A0A151WJS1   A0A195BTN5   A0A158NNV2   A0A151ICA5   A0A151IWU5   A0A182SK98   E9IHB7   A0A195EW12   A0A1S4F960   Q17BK6   A0A1J1IW01   T1PE42   A0A1I8MNW8   B4I5A8   A0A1B0FHP1   A0A0C9Q6X2   A0A0C9R140   A0A0L0C254   A0A1I8P4G4   M9NDR2   M9PDL9   P16568   B4Q7Y4   A0A069DX56   A0A0M4E6J5   B4MTV8   A0A023F289   A0A0J9R366   M9PDB8   A0A3B0JCE5   B4P8R6   A0A3B0K362   B4JB50   B4GQC4   B5DJ67   A0A026WQY3   A0A1W4V050   A0A3B0JDA7   B3NMH2   A0A1B6C1N9   A0A067QUS5   A0A2J7RHA4   B4KHC2   B4LU99   B3MMI0  

KEGG

101740139    K18739 protein bicaudal D | (RefSeq) protein bicaudal D

GO

GO:0008093   GO:0070840   GO:0016021   GO:0051028   GO:0005829   GO:0030100   GO:0005737   GO:2000302   GO:0007309   GO:0005856   GO:0032050   GO:0048488   GO:0007312   GO:0008103   GO:0070727   GO:0050658   GO:0007294   GO:0016325   GO:0008298   GO:0017137   GO:0007293   GO:0048477   GO:0098793   GO:2000370   GO:0005794   GO:0006810   GO:0006468   GO:0007169   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0003824  

PANTHER

PTHR31233  

Subcellular location

  

Length:

349

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01055

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01100

outside

1  -  349

 

 

Pi

209.002005

Theta

166.542576

Tajima's D

0.77008

CLR

0.007082

CSRT

0.60261986900655

Interpretation

Uncertain