Gene

KWMTBOMO11176  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012641

Annotation

PREDICTED:_protein_bicaudal_D_[Plutella_xylostella]

Location

Bomo_Chr19(-):80597-86065      View in EpiBrowser

Full name

Protein bicaudal D      

Location in the cell

Cytoplasmic   Reliability : 1.403 Nuclear   Reliability : 1.518

CDS

ATGGAGACCACGGAGGAGCGCGGCGCCGAGCTGGCCGAGCTCCAGGAGCAGGTCATCAAGCTGAAGTCCCTTCTGTCGACCAAGCGCGAGCAGATCGCGACGCTGCGCACCGTGCTCAAGTCCAACAAGAACACGGCCGAGGTGGCGCTCGCGAACCTCAAGTCCAAGTACGAGACGGAGAAGACGATCGTCACGGAGACCATGCTCAAGCTCAGGAACGAGCTGCGCCTGCTCAAGGAGGACGCCGCTACGTTCTCGAGCTTGCGTGCCATGTTCGCGGCGCGCTGCGAGGAGTACGTGACGCAGGTGGACGAGCTGACGCAGGCGCTCTCCGGGGCCGAGGATGAGAAGAAGACCCTCAACCAGCTGCTGCGCCTCGCCGTGCAGCAGAAGCTGGCGCTCACGCAACGGCTCGAGGAGCTGGAGGTGGACCGCGAGATGCGCTCCCGGCGCGTGCCCAAGGCGGGCGGGGTGCGGGGCGGCAGGGGGAGGGACTTCTAG

Protein

METTEERGAELAELQEQVIKLKSLLSTKREQIATLRTVLKSNKNTAEVALANLKSKYETEKTIVTETMLKLRNELRLLKEDAATFSSLRAMFAARCEEYVTQVDELTQALSGAEDEKKTLNQLLRLAVQQKLALTQRLEELEVDREMRSRRVPKAGGVRGGRGRDF

Description

This protein is essential for differentiation. It may play a role in localizing of Nanos (a maternal determinant) activity in oocytes. During oogenesis, plays a specific role, together with Rab6 but independently of Sec5, in the polarization of the oocyte microtubule cytoskeleton, in oskar mRNA localization and in the anterodorsal secretion of grk.

Subunit

Interacts (via C-terminal domain) with Rab6.

Similarity

Belongs to the BicD family.

Keywords

3D-structure   Coiled coil   Complete proteome   Cytoplasm   Cytoskeleton   Developmental protein   Phosphoprotein   Reference proteome  

Feature

chain  Protein bicaudal D

Uniprot

A0A212ELF3   A0A1E1W8J1   A0A2A4JRH7   A0A194QVL5   A0A2W1BND1   A0A3S2M4U0   + More
A0A0L7LIV9   H9JSX9   A0A194QKP9   A0A2J7RHA2   A0A2H1WQT2   A0A0T6B5Q4   A0A1B6DVA9   E0VQ19   D6WU88   V5I9I1   T1H9D0   A0A1Y1KH97   A0A2J7RHC6   A0A182GID3   U5EWA3   V9IGX1   A0A023EXU0   A0A1Q3FX74   A0A1Q3FX19   A0A1B6JJI3   U4UHW6   N6UI11   Q17BK6   A0A1S4F960   A0A1L8DVM5   A0A1J1IW01   A0A182N8P6   A0A2M4BEJ8   W5JCL6   A0A2M3Z126   A0A1Y9G8A0   A0A2M4AA30   A0A2M4AA84   A0A182YHB5   A0A182P8C0   A0A2M4BEB4   A0A1S4H3C6   A0A182UTV6   A0A2R7W3R7   A0A182JVU3   Q5TNU2   A0A182I0P8   A0A182UCL3   A0A182QLD7   A0A182VSZ4   A0A182XB54   A0A182MRC0   A0A182R6U7   A0A1B6G7Q2   A0A182SK98   A0A1S3DA60   A0A084WD44   A0A182J637   A0A069DX56   A0A023F289   E2A8B5   A0A0J7KVR7   T1PE42   A0A1I8MNW8   E2BYY7   A0A336LXL5   A0A026WQY3   A0A0A1XS68   B4P8R6   A0A151ICA5   A0A158NNV2   A0A195BTN5   F4WVA7   A0A195EW12   A0A151IWU5   A0A0K8TSE8   B4GQC4   E9IHB7   A0A154PQC6   A0A034V781   A0A3L8DNL0   B5DJ67   A0A1I8P4H3   A0A0L0C254   B4MTV8   A0A1I8P4G4   A0A3B0K362   A0A0A9Y006   A0A1W4V050   B3NMH2   B4Q7Y4   M9PDL9   P16568   B0WYT7   M9PDB8   A0A0M8ZV35   A0A0J9R366   A0A087ZVA1   B4KHC2  

Pubmed

22118469    26354079    28756777    26227816    19121390    20566863    + More
18362917    19820115    28004739    26483478    24945155    23537049    17510324    20920257    23761445    25244985    12364791    14747013    17210077    24438588    26334808    25474469    20798317    25315136    24508170    25830018    17994087    17550304    21347285    21719571    26369729    21282665    25348373    30249741    15632085    26108605    25401762    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    2590944    2576013    12537569    11546740    17329360    17827179    17372656    18327897    22936249   

EMBL

AGBW02014073    OWR42315.1    GDQN01007761    JAT83293.1    NWSH01000823    PCG74020.1    + More
KQ461073    KPJ09578.1    KZ149982    PZC75781.1    RSAL01000034    RVE51420.1    JTDY01000937    KOB75365.1    BABH01038923    KQ459053    KPJ04031.1    NEVH01003746    PNF40215.1    ODYU01010336    SOQ55367.1    LJIG01009629    KRT82697.1    GEDC01007695    JAS29603.1    DS235389    EEB15475.1    KQ971352    EFA07458.1    GALX01002895    JAB65571.1    ACPB03024223    GEZM01086115    JAV59771.1    PNF40217.1    JXUM01066153    KQ562383    KXJ76021.1    GANO01001510    JAB58361.1    JR047053    AEY60315.1    GAPW01000259    JAC13339.1    GFDL01003022    JAV32023.1    GFDL01003019    JAV32026.1    GECU01008356    JAS99350.1    KB632331    ERL92622.1    APGK01019266    KB740098    ENN81385.1    CH477320    EAT43661.1    GFDF01003608    JAV10476.1    CVRI01000059    CRL03756.1    GGFJ01002321    MBW51462.1    ADMH02001551    ETN62092.1    GGFM01001455    MBW22206.1    GGFK01004326    MBW37647.1    GGFK01004331    MBW37652.1    GGFJ01002216    MBW51357.1    AAAB01008980    EAL39298.3    KK854301    PTY14373.1    APCN01005229    AXCN02001858    AXCM01000009    GECZ01011294    JAS58475.1    ATLV01022933    KE525338    KFB48138.1    GBGD01000612    JAC88277.1    GBBI01002995    JAC15717.1    GL437526    EFN70328.1    LBMM01002789    KMQ94359.1    KA646964    AFP61593.1    GL451531    EFN79105.1    UFQS01000279    UFQT01000279    SSX02329.1    SSX22704.1    KK107128    EZA58373.1    GBXI01000490    JAD13802.1    CM000158    EDW90174.2    KQ978062    KYM97715.1    ADTU01021805    KQ976417    KYM89784.1    GL888384    EGI61873.1    KQ981953    KYN32455.1    KQ980843    KYN12291.1    GDAI01000321    JAI17282.1    CH479187    EDW39796.1    GL763196    EFZ20056.1    KQ435007    KZC13574.1    GAKP01019781    JAC39171.1    QOIP01000006    RLU21876.1    CH379060    EDY70344.2    JRES01000986    KNC26428.1    CH963852    EDW75547.2    OUUW01000004    SPP80046.1    GBHO01018643    JAG24961.1    CH954179    EDV54843.1    CM000361    EDX05317.1    AE014134    AGB93065.1    M31684    X51652    AY069452    DS232198    EDS37197.1    AGB93066.1    KQ435830    KOX71735.1    CM002910    KMY90712.1    CH933807    EDW11186.2   

Proteomes

UP000007151    UP000218220    UP000053240    UP000283053    UP000037510    UP000005204    + More
UP000053268    UP000235965    UP000009046    UP000007266    UP000015103    UP000069940    UP000249989    UP000030742    UP000019118    UP000008820    UP000183832    UP000075884    UP000000673    UP000069272    UP000076408    UP000075885    UP000007062    UP000075903    UP000075881    UP000075840    UP000075902    UP000075886    UP000075920    UP000076407    UP000075883    UP000075900    UP000075901    UP000079169    UP000030765    UP000075880    UP000000311    UP000036403    UP000095301    UP000008237    UP000053097    UP000002282    UP000078542    UP000005205    UP000078540    UP000007755    UP000078541    UP000078492    UP000008744    UP000076502    UP000279307    UP000001819    UP000095300    UP000037069    UP000007798    UP000268350    UP000192221    UP000008711    UP000000304    UP000000803    UP000002320    UP000053105    UP000005203    UP000009192   

PRIDE

H9JSX9    P16568   

Pfam

PF09730   BicD        + More
PF00098   zf-CCHC

Interpro

IPR018477   BICD        + More
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       

SUPFAM

SSF57756   SSF57756       

ProteinModelPortal

A0A212ELF3   A0A1E1W8J1   A0A2A4JRH7   A0A194QVL5   A0A2W1BND1   A0A3S2M4U0   + More
A0A0L7LIV9   H9JSX9   A0A194QKP9   A0A2J7RHA2   A0A2H1WQT2   A0A0T6B5Q4   A0A1B6DVA9   E0VQ19   D6WU88   V5I9I1   T1H9D0   A0A1Y1KH97   A0A2J7RHC6   A0A182GID3   U5EWA3   V9IGX1   A0A023EXU0   A0A1Q3FX74   A0A1Q3FX19   A0A1B6JJI3   U4UHW6   N6UI11   Q17BK6   A0A1S4F960   A0A1L8DVM5   A0A1J1IW01   A0A182N8P6   A0A2M4BEJ8   W5JCL6   A0A2M3Z126   A0A1Y9G8A0   A0A2M4AA30   A0A2M4AA84   A0A182YHB5   A0A182P8C0   A0A2M4BEB4   A0A1S4H3C6   A0A182UTV6   A0A2R7W3R7   A0A182JVU3   Q5TNU2   A0A182I0P8   A0A182UCL3   A0A182QLD7   A0A182VSZ4   A0A182XB54   A0A182MRC0   A0A182R6U7   A0A1B6G7Q2   A0A182SK98   A0A1S3DA60   A0A084WD44   A0A182J637   A0A069DX56   A0A023F289   E2A8B5   A0A0J7KVR7   T1PE42   A0A1I8MNW8   E2BYY7   A0A336LXL5   A0A026WQY3   A0A0A1XS68   B4P8R6   A0A151ICA5   A0A158NNV2   A0A195BTN5   F4WVA7   A0A195EW12   A0A151IWU5   A0A0K8TSE8   B4GQC4   E9IHB7   A0A154PQC6   A0A034V781   A0A3L8DNL0   B5DJ67   A0A1I8P4H3   A0A0L0C254   B4MTV8   A0A1I8P4G4   A0A3B0K362   A0A0A9Y006   A0A1W4V050   B3NMH2   B4Q7Y4   M9PDL9   P16568   B0WYT7   M9PDB8   A0A0M8ZV35   A0A0J9R366   A0A087ZVA1   B4KHC2  

PDB

4BL6     E-value=1.18588e-19,     Score=232

KEGG

101740139    K18739 protein bicaudal D | (RefSeq) protein bicaudal D

GO

GO:0070840   GO:0008093   GO:0016021   GO:0051028   GO:0005829   GO:0030100   GO:0005737   GO:2000302   GO:0007309   GO:0005856   GO:0032050   GO:0048488   GO:0007312   GO:0008103   GO:0070727   GO:0050658   GO:0007294   GO:0016325   GO:0008298   GO:0017137   GO:0007293   GO:0048477   GO:0098793   GO:2000370   GO:0005794   GO:0006810   GO:0006468   GO:0007169   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0003824  

PANTHER

PTHR31233  

Subcellular location

  

Length:

166

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20693

outside

1  -  166

 

 

Pi

176.174707

Theta

169.915055

Tajima's D

-1.007332

CLR

0

CSRT

0.132543372831358

Interpretation

Uncertain