Gene

KWMTBOMO11175

Pre Gene Modal

BGIBMGA012653

Annotation

PREDICTED:_muskelin_[Papilio_machaon]

Location

Bomo_Chr19(+):58836-71800      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.089 Nuclear   Reliability : 1.272

CDS

ATGGAAGATAAATACGAGACTGTGCAGCTTTCGTACTCTATACACAAATGCTCGAGCCATTCCTCGGGCTATGTTCCAGAGAACATCATAGTGAATCAACCATCAGATCCATTGTCAAGGTGGTTCACAGACTGCTGCGTTTCACCACAATTCATAGTTATAAAACTGGACTCTCCCTCTATAGTTGAAACAATCAAATTCGGAAAATATATCAAGGCACTCGTTAGTGATCTCAAAAAGTTTCAGGTCTATGGTGGAACAGAAGATAGCAATATGTCTCTGCTGTTGACTGCTGGCTTGAAGAAAGACAGTACACCGGAAACATTCAGATTGAGGCACAGGACACAGGAAGGATTTTACTTCCCTGTTGAATACCTAAAGATTGTCCCACTACAGTCGTGGGGCCCTCCCTACAATTATACCATATGGTACATAGAGTTACATGGCAAAAATCAGGCAGAACTTCTCAATGAGGCACTGGAGACAATTTATTTGCGTAAAGAAGAAGAAGCAGTGCGATTGTTACTAAAACACTTGAGGCGGAGACGCTACAAGGATGCTTTCGAAGCTTTGTCTAGAGAAAGCGGAGTGCAGCTCGAAGGGCCAACACAGACTAAACTCTGGAACGCTTTAGTCGAGAATGGTGACTATCAGGCGGCCGAGAAAATTTTCGAACAAGCCGTTAATGATGGCGAGTTAGAGTGGTACATGTCGTGGCAGCCGTACCGGCCGGAGTGGCGCGAGATGTCGGCGTGCTCGGCGCAGGTGGAGGAGCGGCTGCGCAGCGGGGACGCGCACGTGGCCGGGCCCCCCGCCGCCCCGCACGACTTGTTGTGCGCCGACCGCGAGCCCAGGCCCGACGCCGCCGGTGCAGCACCAGTAAGCAACGAGCTGTTCGAGACGTGTGACCTGGCCTGCGGCCTCACCGCCTGCTGCAACAAGCCTGGCCCCAGGGGCGGACACCAGCTGGTGGTCGATTCTACTACGGGCACCCTCTATCTGTTTGGTGGCTGGAACGGGACCGAGGACCTGGACGACCTGTGGTCCTACAGCACCAAGGGCGAGCGCTGGACGCTGCTCTGCAGGCACAGCAGTCTCGTCGGCGGCCCCACGCCCCGCTCCTGTCACAAGATGGTGTTCGATCCCGTGCACAGACGGCTCTACACCCTGGGACGGTACCTCGACAACGCTCAGAGGGTGCCCAGCAATATGAATAGCGACCTGTACATGTACGACGTGTGGACGGGCGAGTGGTACCTGGTGTGCAGCGACACGGCGAGCGCGGGGGGGCCGCGGCTGGTGTTCGACCACCAGATGTGCATCGACGCCGACACGCAGACCATATACGTGTTCGGGGGGAGAGTGCTGCCGGCCAACACTGAGGAGGTAGTGAGCCCGCAGTATTCGGGCTTGTACGCGTACTACATCTCCACCGGCACCTGGCAGCTGCTGCTGGCCGACAAGCACGACGAGGACGCCCCGCAGCCCAGGGTCTCGCACTCCATGCTGTTCCACCCGGTGCAGCGGCGCCTGTACATATTCGCGGGGCAGCGCAACAAGGAGCACCTGCTGGACCTGTGGTGGTACGAGGTGGGGTCGGGGGCGTGCGGCGCCTTGTGCCGCTGCGGTGCCGCGCCGCCCCCCGCCGCCGGCTTCACGCAGCGCGCCACGCTCGACCCCGACACCGACCAGATGTTCGTGCTGTCCGGCATGAGCAAGGAGAAGGAGAAGCGCGTGTACAACACTCTGTGGGTGCTGTCGCTGCGCACGCGCACGTGGAGCTGCCTGTACCGCGCGCACGCCCCCCCGGCCCCCGCGCCCGCGCCCGGCGGCCCCGCCCCCACCTCGCGGGCCCCCACCCCCCGGTTCGCGCACCAGCTGGTCTACGATCCTAACACCAAGATACATTACCTGTTCGGCGGCAACCCCGGCATACAGAGCAGCCCGCGCCTGCGGCTGGACGACCTGTGGTCGCTGAGGCTGGTGCAGCCGTCGCTGGAGCAAGTGTGGGGCGAGGCGCGCGCCATCCTGCGGGAAGCCTGCTACCGGGAGATGGCCACCCAGCCCGGGGCCACGGTCCAGGCCTTGAGCTACCTGAGGAACGAGCTCAGCAGCGTCATGGACCACACCGACCCCGCACAGGTGTCGAGGTTCCAGAAGCTGGCGACGTTGTTGTTCAGCGGCGGCGACGAGGGGGCGGCCCTCCCCTCGCCCCGCGCGCTCTCCCCGCGCCGCACCCGCGCCCTGCTGCGCGCCCGCACGCACCACGCCTCGCACGCACACATCGCGGACGCGCTCGCACAGGTACGCACGCGCTGA

Protein

MEDKYETVQLSYSIHKCSSHSSGYVPENIIVNQPSDPLSRWFTDCCVSPQFIVIKLDSPSIVETIKFGKYIKALVSDLKKFQVYGGTEDSNMSLLLTAGLKKDSTPETFRLRHRTQEGFYFPVEYLKIVPLQSWGPPYNYTIWYIELHGKNQAELLNEALETIYLRKEEEAVRLLLKHLRRRRYKDAFEALSRESGVQLEGPTQTKLWNALVENGDYQAAEKIFEQAVNDGELEWYMSWQPYRPEWREMSACSAQVEERLRSGDAHVAGPPAAPHDLLCADREPRPDAAGAAPVSNELFETCDLACGLTACCNKPGPRGGHQLVVDSTTGTLYLFGGWNGTEDLDDLWSYSTKGERWTLLCRHSSLVGGPTPRSCHKMVFDPVHRRLYTLGRYLDNAQRVPSNMNSDLYMYDVWTGEWYLVCSDTASAGGPRLVFDHQMCIDADTQTIYVFGGRVLPANTEEVVSPQYSGLYAYYISTGTWQLLLADKHDEDAPQPRVSHSMLFHPVQRRLYIFAGQRNKEHLLDLWWYEVGSGACGALCRCGAAPPPAAGFTQRATLDPDTDQMFVLSGMSKEKEKRVYNTLWVLSLRTRTWSCLYRAHAPPAPAPAPGGPAPTSRAPTPRFAHQLVYDPNTKIHYLFGGNPGIQSSPRLRLDDLWSLRLVQPSLEQVWGEARAILREACYREMATQPGATVQALSYLRNELSSVMDHTDPAQVSRFQKLATLLFSGGDEGAALPSPRALSPRRTRALLRARTHHASHAHIADALAQVRTR

Uniprot

H9JSZ1   A0A3S2NHT3   A0A194R159   A0A194QER7   A0A2W1BL65   A0A212ELF0   + More
A0A2A4JQC8   E9FYH3   A0A182JP99   A0A1Q3F2U2   B0XCK1   A0A1B6MEJ4   A0A0P6C3Q4   A0A0P5R8K0   A0A0P5S749   A0A0P5LBR8   A0A131YV48   A0A0P5P103   A0A164M4S6   A0A0P5HD64   A0A224Z4H8   A0A0P5GKN3   A0A084VXI4   A0A2C9JCU9   A0A182VGW9   Q7Q986   A0A182HXQ2   A0A182UDD3   A0A0S7K381   A0A0P5V045   A0A3B3WPE9   A0A3Q2PJT7   A0A182MW81   A0A3B3WPF1   A0A0S7K508   A0A087XH80   A0A3P9PTY5   A0A182WCU1   A0A3B4GZE3   A0A182RKJ5   A0A182IQQ3   A0A2U9B1R1   A0A060XV92   A0A2I4CS89   A0A3P8PST4   Q16NC7   A0A0P4WVC9   M3ZSP4   A0A3B5L7K2   A0A1A8VGY6   A0A1A8Q2K2   A0A1A8JJX1   A0A1A8HCC0   A0A1A8EA72   A0A0F8ATY8   A0A182H812   H3CIK6   A0A3Q3BF52   A0A1A7Z8G1   A0A3P8U201   K7IPJ1   A0A3P8ZJ68   A0A0L8I1G7   A0A182XNL9   A0A0N7ZD02   A0A0P6FBX3   A0A3Q1CWF7   A0A1A8LI37   A0A2C9JCV1   A0A0P5DXT5   W5NF47   A0A3P8PSX1   A0A3P9BJM4   A0A3Q3BFX9   A0A3Q1FAS7   A0A3Q3H1M3   A0A1A7X3Z7   A0A1W4ZH71   I3K1S2   A0A2Y9NN65   A0A3Q3BLH4   A0A0S7K2C0   A0A2Y9REN4   A0A3Q1JTU0   A0A2U4ABA0   A0A3Q7TMU8   A0A0P5DN51   G1PNE0   A0A3B3CBX0   A0A0S7K2L4   A0A232F4B2   A0A0C9R525   A0A182YBS3   I3M744   G1LGS8   A0A287B7X4   G3U6U9   A0A3S2MCY8   A0A3Q3NFD8   H9FB21  

Pubmed

19121390    26354079    28756777    22118469    21292972    26830274    + More
28797301    24438588    15562597    12364791    24755649    17510324    23542700    25835551    26483478    15496914    20075255    25069045    25186727    21993624    29451363    28648823    25244985    20010809    30723633    25319552   

EMBL

BABH01038922    RSAL01000034    RVE51419.1    KQ461073    KPJ09576.1    KQ459053    + More
KPJ04033.1    KZ149982    PZC75779.1    AGBW02014073    OWR42316.1    NWSH01000823    PCG74019.1    GL732527    EFX87767.1    GFDL01013173    JAV21872.1    DS232698    EDS44863.1    GEBQ01030108    GEBQ01005682    JAT09869.1    JAT34295.1    GDIP01021513    JAM82202.1    GDIQ01106237    JAL45489.1    GDIQ01108524    JAL43202.1    GDIQ01173350    JAK78375.1    GEDV01005458    JAP83099.1    GDIQ01135233    JAL16493.1    LRGB01003091    KZS04726.1    GDIQ01229238    JAK22487.1    GFPF01009998    MAA21144.1    GDIQ01239186    JAK12539.1    ATLV01018074    KE525212    KFB42678.1    AAAB01008905    EAA09711.3    APCN01005336    GBYX01222979    JAO71459.1    GDIP01107536    JAL96178.1    AXCM01001770    GBYX01222990    JAO71451.1    AYCK01014463    CP026244    AWO97860.1    FR906179    CDQ83441.1    CH477829    EAT35847.1    GDRN01056048    JAI65878.1    HAEJ01018400    SBS58857.1    HAEI01000681    HAEH01009567    SBR87487.1    HAED01013745    HAEE01000385    SBR20401.1    HAEB01010221    HAEC01013619    SBQ81836.1    HADZ01003951    HAEA01014363    SBQ42843.1    KQ041079    KKF30652.1    JXUM01117542    JXUM01117543    JXUM01117544    KQ566094    KXJ70402.1    HADY01000293    SBP38778.1    KQ416771    KOF95269.1    GDRN01056045    JAI65880.1    GDIQ01052366    JAN42371.1    HAEF01006614    SBR43996.1    GDIP01154079    JAJ69323.1    AHAT01016157    HADW01011288    HADX01005502    SBP12688.1    AERX01022746    AERX01022747    GBYX01222977    JAO71461.1    GDIP01154928    JAJ68474.1    AAPE02016873    AAPE02016874    AAPE02016875    AAPE02016876    AAPE02016877    GBYX01222975    JAO71463.1    NNAY01001008    OXU25515.1    GBYB01003060    GBYB01008258    JAG72827.1    JAG78025.1    AGTP01066021    AGTP01066022    AGTP01066023    AGTP01066024    AGTP01066025    AGTP01066026    AGTP01066027    AGTP01066028    AGTP01066029    ACTA01057078    ACTA01065078    ACTA01073078    ACTA01081078    ACTA01089078    ACTA01097078    ACTA01105078    ACTA01113078    ACTA01121078    ACTA01129078    AEMK02000111    DQIR01093980    HDA49456.1    CM012459    RVE56396.1    JU328074    AFE71830.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    UP000218220    + More
UP000000305    UP000075881    UP000002320    UP000076858    UP000030765    UP000076420    UP000075903    UP000007062    UP000075840    UP000075902    UP000261480    UP000265000    UP000075883    UP000028760    UP000242638    UP000075920    UP000261460    UP000075900    UP000075880    UP000246464    UP000193380    UP000192220    UP000265100    UP000008820    UP000002852    UP000261380    UP000069940    UP000249989    UP000007303    UP000264800    UP000265080    UP000002358    UP000265140    UP000053454    UP000076407    UP000257160    UP000018468    UP000265160    UP000257200    UP000261660    UP000192224    UP000005207    UP000248483    UP000264840    UP000248480    UP000265040    UP000245320    UP000286640    UP000001074    UP000261560    UP000215335    UP000076408    UP000005215    UP000008912    UP000008227    UP000007646    UP000261640   

PRIDE

H9JSZ1   

Pfam

PF06588   Muskelin_N        + More
PF01344   Kelch_1
PF03271   EB1

Interpro

IPR008979   Galactose-bd-like_sf        + More
IPR006594   LisH       
IPR015915   Kelch-typ_b-propeller       
IPR010565   Muskelin_N       
IPR011043   Gal_Oxase/kelch_b-propeller       
IPR000421   FA58C       
IPR006652   Kelch_1       
IPR006595   CTLH_C       
IPR004953   EB1_C       
IPR042180   IF_rod_dom_coil1B       
IPR036872   CH_dom_sf       
IPR001715   CH-domain       
IPR036133   EB1_C_sf       

SUPFAM

SSF49785   SSF49785        + More
SSF117281   SSF117281       
SSF50965   SSF50965       
SSF47576   SSF47576       
SSF140612   SSF140612       

Gene 3D

2.120.10.80     2.60.120.260     1.10.418.10     1.20.5.1160    

ProteinModelPortal

H9JSZ1   A0A3S2NHT3   A0A194R159   A0A194QER7   A0A2W1BL65   A0A212ELF0   + More
A0A2A4JQC8   E9FYH3   A0A182JP99   A0A1Q3F2U2   B0XCK1   A0A1B6MEJ4   A0A0P6C3Q4   A0A0P5R8K0   A0A0P5S749   A0A0P5LBR8   A0A131YV48   A0A0P5P103   A0A164M4S6   A0A0P5HD64   A0A224Z4H8   A0A0P5GKN3   A0A084VXI4   A0A2C9JCU9   A0A182VGW9   Q7Q986   A0A182HXQ2   A0A182UDD3   A0A0S7K381   A0A0P5V045   A0A3B3WPE9   A0A3Q2PJT7   A0A182MW81   A0A3B3WPF1   A0A0S7K508   A0A087XH80   A0A3P9PTY5   A0A182WCU1   A0A3B4GZE3   A0A182RKJ5   A0A182IQQ3   A0A2U9B1R1   A0A060XV92   A0A2I4CS89   A0A3P8PST4   Q16NC7   A0A0P4WVC9   M3ZSP4   A0A3B5L7K2   A0A1A8VGY6   A0A1A8Q2K2   A0A1A8JJX1   A0A1A8HCC0   A0A1A8EA72   A0A0F8ATY8   A0A182H812   H3CIK6   A0A3Q3BF52   A0A1A7Z8G1   A0A3P8U201   K7IPJ1   A0A3P8ZJ68   A0A0L8I1G7   A0A182XNL9   A0A0N7ZD02   A0A0P6FBX3   A0A3Q1CWF7   A0A1A8LI37   A0A2C9JCV1   A0A0P5DXT5   W5NF47   A0A3P8PSX1   A0A3P9BJM4   A0A3Q3BFX9   A0A3Q1FAS7   A0A3Q3H1M3   A0A1A7X3Z7   A0A1W4ZH71   I3K1S2   A0A2Y9NN65   A0A3Q3BLH4   A0A0S7K2C0   A0A2Y9REN4   A0A3Q1JTU0   A0A2U4ABA0   A0A3Q7TMU8   A0A0P5DN51   G1PNE0   A0A3B3CBX0   A0A0S7K2L4   A0A232F4B2   A0A0C9R525   A0A182YBS3   I3M744   G1LGS8   A0A287B7X4   G3U6U9   A0A3S2MCY8   A0A3Q3NFD8   H9FB21  

PDB

4OYU     E-value=1.89436e-39,     Score=411

KEGG

101740006    K23337 muskelin | (RefSeq) muskelin

GO

GO:0016021   GO:0005874   GO:0008017   GO:0042802   GO:0000151   GO:0007160   GO:0031532   GO:0008360   GO:0005938   GO:0005829   GO:0005654   GO:0001726   GO:0005515   GO:0008270   GO:0006468   GO:0007169   GO:0016020   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

772

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00550999999999999

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.00039

outside

1  -  772

 

 

Pi

256.967096

Theta

194.974544

Tajima's D

0.485446

CLR

0.143506

CSRT

0.511524423778811

Interpretation

Uncertain