Gene

KWMTBOMO11170

Pre Gene Modal

BGIBMGA013954

Annotation

PREDICTED:_plexin_A3-like_[Papilio_machaon]

Location

Bomo_Chr18(+):15583812-15584733      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.185

CDS

ATGAGGATCGACTCTTTAGTGGCGCTGTGTGTCGGGACTCTGTTTCGTCTGTGCGACTCGTCACAGAGGCAAAAGAGGCCGTTGACCCCCGATGGCGGGAGGGACCGCTTCCGAGGGCCGCTTCTAACGCTAGAGCAGCACGATGTGTTTGACAGCGGATTGGATTCCGTGAGTAGTGTTCAACCACCGGGTGCCAACTCGTACTGTACATGTTTGAGCACGTGCCACGAATGTGTGACCAGTTACTTGGCCGAGTGCGAGTGGACACACGAGCTGGGCTGCGTGCATTCAGATCTCGAGCCCTCCTCCGCCAGACGGGAGTGTCCCGTTCTAACAAACGACGGACCCGTCCTGGTCCCGGAGGGCGTCAGGCGGTATCTGAAGCTCCAGTTGCAGGCTACCGACCCGACCCTGTACGGCAAAGAAATCATTTGTCAAATTAAGCTGAGGGAGAGACTAACGCACTTGAAGGGTCGCATCTGGAACGACGCGGCCTACTGCTACCCGGTGACGCTGAGCGCCTCGGAGCCGGAGACGGGCAGCGTGAGCGTGGTGTGGGGCGGCGCGGCCCCGCACTCCAACGAGCTGCCGCTGGCGGTGTACCGGTGCGAGTGGCTGGGCGGGGACTGCGAGTCCTGCCGCGCGCTGCCCCCGCTGTACGCGTGCGGGTGGTGCCGCCGCCTGCACTCCTGCGTGCTCTCTCAGCTCTGCCGCGACCACCTCCGCGAGTGGACCCTCAACAGACTCACGTGCGACCCTCGAGCAAGGGAACTGTACTATGTATGA

Protein

MRIDSLVALCVGTLFRLCDSSQRQKRPLTPDGGRDRFRGPLLTLEQHDVFDSGLDSVSSVQPPGANSYCTCLSTCHECVTSYLAECEWTHELGCVHSDLEPSSARRECPVLTNDGPVLVPEGVRRYLKLQLQATDPTLYGKEIICQIKLRERLTHLKGRIWNDAAYCYPVTLSASEPETGSVSVVWGGAAPHSNELPLAVYRCEWLGGDCESCRALPPLYACGWCRRLHSCVLSQLCRDHLREWTLNRLTCDPRARELYYV

Uniprot

A0A2H1V410   A0A2A4IUJ4   A0A0L7LSJ4   A0A0L7LSA6   B7PTP7   A0A2R5LCW1   + More
L7MBQ7   A0A194RMP5   A0A194QGG0   A0A2H8TRM4   J9K4Q6   A0A2S2NCY9   A0A224Z5Z0   A0A131XB75   A0A131Y2G1   A0A1J1J768   A0A2S2QX37   A0A1Q3G2I7   V5HPG6   B0WHF6   A0A131YJ04   A0A0C9RPB7   H9JFE1   A0A0L7LG34   A0A0C9Q4J4   A0A3S2TI19   A0A1A9ZLI1   A0A2A4J834   A0A1A9WQ85   A0A2H1WP45   A0A1E1WFF2   A0A1B0GBN1   A0A1A9VAI8   A0A088ATJ3   S4PXU2   B3N1J7   A0A2A3ET31   A0A1A9Y8C3   A0A1B0C4V2   A0A212FDA2   D6W8D3   A0A1I8MLF1   T1PL39   A0A1I8PUY5   A0A0L0CGF9   E0VB65   A0A182N014   A0A336KRY1   A0A182Q7K2   A0A1V9X4M6   A0A1B6CQ54   W8BJM0   A0A182J3Q4   A0A087T6W9   A0A0K8UXF7   A0A084WPS1   A0A0K8VP38   A0A131ZYH9   N6T8S8   W4VRI5   B4NHL1   A0A0Q9X4E2   A0A0A1WF08   A0A0A1WX29   A0A034V9L5   A0A0K8WFC1   A0A0C9RAZ2   A0A146M9R2   A0A0Q5SRR1   B3P9Q3   H9XVP3   Q9V491   A0A0R1E7K4   O96681   B4PW38   A0A1W4VIG9   A0A0T6ATK4   A0A182FIL0   A0A2M4DMU4   A0A2M3YZV4   A0A2M4CTE5   Q0KIF1   A0A2M4A2B4   A0A2M4B8J8   A0A2M4B8C8   B4IKQ5   A0A0Q9WWG1   B4MEY9   A0A2M4B9G6   G7H847   A0A3B0KQP8   A0A0A9W9I5   B4HC94   Q7YU07   W5JDG7   A0A1Y3AWZ4  

Pubmed

26227816    25576852    26354079    28797301    28049606    25765539    + More
26830274    19121390    23622113    17994087    18057021    22118469    18362917    19820115    25315136    26108605    20566863    28327890    24495485    24438588    26555130    23537049    25830018    25348373    26823975    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    9875845    26109357    26109356    20479145    25401762    20920257    23761445   

EMBL

ODYU01000564    SOQ35539.1    NWSH01006451    PCG63425.1    JTDY01000194    KOB78359.1    + More
KOB78358.1    ABJB010041369    ABJB010405935    ABJB010446411    ABJB010579568    ABJB010644619    ABJB010945892    ABJB011016644    ABJB011020105    ABJB011063784    ABJB011090231    DS787602    EEC09969.1    GGLE01003238    MBY07364.1    GACK01003358    JAA61676.1    KQ460154    KPJ17271.1    KQ458880    KPJ04623.1    GFXV01004073    MBW15878.1    ABLF02030752    GGMR01002465    MBY15084.1    GFPF01010648    MAA21794.1    GEFH01004774    JAP63807.1    GEFM01002112    JAP73684.1    CVRI01000074    CRL08243.1    GGMS01013020    MBY82223.1    GFDL01001010    JAV34035.1    GANP01004589    JAB79879.1    DS231935    EDS27706.1    GEDV01010085    JAP78472.1    GBYB01009006    JAG78773.1    BABH01038331    JTDY01001245    KOB74417.1    GBYB01008998    JAG78765.1    RSAL01000124    RVE46604.1    NWSH01002687    PCG67684.1    ODYU01010027    SOQ54840.1    GDQN01005376    JAT85678.1    CCAG010016223    GAIX01004443    JAA88117.1    CH902659    EDV33932.2    KPU74854.1    KZ288185    PBC34943.1    JXJN01025691    AGBW02009093    OWR51703.1    KQ971307    EFA11552.1    KA648835    AFP63464.1    JRES01000411    KNC31483.1    DS235022    EEB10621.1    UFQS01000844    UFQT01000844    SSX07239.1    SSX27582.1    AXCN02001219    MNPL01024451    OQR68535.1    GEDC01021652    JAS15646.1    GAMC01009332    JAB97223.1    KK113709    KFM60858.1    GDHF01020970    GDHF01016647    JAI31344.1    JAI35667.1    ATLV01025123    KE525369    KFB52215.1    GDHF01030966    GDHF01022027    GDHF01011667    JAI21348.1    JAI30287.1    JAI40647.1    JXLN01004331    KPM03170.1    APGK01047072    KB741077    KB632384    ENN74103.1    ERL94234.1    GANO01002511    JAB57360.1    CH964272    EDW83580.1    KRF99821.1    GBXI01017289    JAC97002.1    GBXI01010905    JAD03387.1    GAKP01020725    GAKP01020724    JAC38228.1    GDHF01016163    GDHF01002749    JAI36151.1    JAI49565.1    GBYB01004036    JAG73803.1    GDHC01002634    JAQ15995.1    CH954184    KQS21463.1    EDV45216.1    AE014135    AFH06788.1    AAF59394.1    CM000161    KRK04985.1    AF106932    AAD09425.1    EDW99343.1    KRK04984.1    KRK04986.1    KRK04987.1    LJIG01022833    KRT78483.1    GGFL01014694    MBW78872.1    GGFM01001046    MBW21797.1    GGFL01004444    MBW68622.1    AAN06563.1    AAN06564.1    GGFK01001539    MBW34860.1    GGFJ01000169    MBW49310.1    GGFJ01000153    MBW49294.1    CH480855    EDW52645.1    CH940665    KRF85332.1    CM000831    ACY70534.1    EDW71090.2    KRF85333.1    GGFJ01000525    MBW49666.1    BT132771    AET11746.1    OUUW01000017    SPP88949.1    GBHO01040461    JAG03143.1    CH479285    EDW25269.1    BT010060    AAQ22529.1    ADMH02001536    ETN62141.1    MUJZ01053491    OTF73030.1   

Proteomes

UP000218220    UP000037510    UP000001555    UP000053240    UP000053268    UP000007819    + More
UP000183832    UP000002320    UP000005204    UP000283053    UP000092445    UP000091820    UP000092444    UP000078200    UP000005203    UP000007801    UP000242457    UP000092443    UP000092460    UP000007151    UP000007266    UP000095301    UP000095300    UP000037069    UP000009046    UP000075884    UP000075886    UP000192247    UP000075880    UP000054359    UP000030765    UP000019118    UP000030742    UP000007798    UP000008711    UP000000803    UP000002282    UP000192221    UP000069272    UP000001292    UP000008792    UP000268350    UP000008744    UP000000673   

PRIDE

B7PTP7    V5HPG6    H9JFE1    H9XVP3    Q9V491    O96681    + More
Q0KIF1    G7H847    Q7YU07   

Pfam

PF01437   PSI        + More
PF01403   Sema
PF01833   TIG
PF17960   TIG_plexin
PF08337   Plexin_cytopl
PF18020   TIG_2
PF16076   Acyltransf_C
PF01553   Acyltransferase

Interpro

IPR016201   PSI        + More
IPR031148   Plexin       
IPR002165   Plexin_repeat       
IPR041019   TIG1_plexin       
IPR008936   Rho_GTPase_activation_prot       
IPR013548   Plexin_cytoplasmic_RasGAP_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036352   Semap_dom_sf       
IPR002909   IPT_dom       
IPR014756   Ig_E-set       
IPR001627   Semap_dom       
IPR041362   TIG2_plexin       
IPR013783   Ig-like_fold       
IPR031146   Invert_Plexin-B       
IPR032098   Acyltransf_C       
IPR002123   Plipid/glycerol_acylTrfase       

SUPFAM

SSF101912   SSF101912        + More
SSF48350   SSF48350       
SSF81296   SSF81296       

Gene 3D

2.130.10.10     2.60.40.10    

ProteinModelPortal

A0A2H1V410   A0A2A4IUJ4   A0A0L7LSJ4   A0A0L7LSA6   B7PTP7   A0A2R5LCW1   + More
L7MBQ7   A0A194RMP5   A0A194QGG0   A0A2H8TRM4   J9K4Q6   A0A2S2NCY9   A0A224Z5Z0   A0A131XB75   A0A131Y2G1   A0A1J1J768   A0A2S2QX37   A0A1Q3G2I7   V5HPG6   B0WHF6   A0A131YJ04   A0A0C9RPB7   H9JFE1   A0A0L7LG34   A0A0C9Q4J4   A0A3S2TI19   A0A1A9ZLI1   A0A2A4J834   A0A1A9WQ85   A0A2H1WP45   A0A1E1WFF2   A0A1B0GBN1   A0A1A9VAI8   A0A088ATJ3   S4PXU2   B3N1J7   A0A2A3ET31   A0A1A9Y8C3   A0A1B0C4V2   A0A212FDA2   D6W8D3   A0A1I8MLF1   T1PL39   A0A1I8PUY5   A0A0L0CGF9   E0VB65   A0A182N014   A0A336KRY1   A0A182Q7K2   A0A1V9X4M6   A0A1B6CQ54   W8BJM0   A0A182J3Q4   A0A087T6W9   A0A0K8UXF7   A0A084WPS1   A0A0K8VP38   A0A131ZYH9   N6T8S8   W4VRI5   B4NHL1   A0A0Q9X4E2   A0A0A1WF08   A0A0A1WX29   A0A034V9L5   A0A0K8WFC1   A0A0C9RAZ2   A0A146M9R2   A0A0Q5SRR1   B3P9Q3   H9XVP3   Q9V491   A0A0R1E7K4   O96681   B4PW38   A0A1W4VIG9   A0A0T6ATK4   A0A182FIL0   A0A2M4DMU4   A0A2M3YZV4   A0A2M4CTE5   Q0KIF1   A0A2M4A2B4   A0A2M4B8J8   A0A2M4B8C8   B4IKQ5   A0A0Q9WWG1   B4MEY9   A0A2M4B9G6   G7H847   A0A3B0KQP8   A0A0A9W9I5   B4HC94   Q7YU07   W5JDG7   A0A1Y3AWZ4  

PDB

5L5N     E-value=5.54803e-06,     Score=117

KEGG

NA   

GO

GO:0017154   GO:0016021   GO:0043087   GO:0097374   GO:0007162   GO:1902287   GO:0030334   GO:0002116   GO:0050772   GO:0008360   GO:0005887   GO:0071889   GO:0007265   GO:0030250   GO:2000305   GO:0016199   GO:0005096   GO:0008201   GO:0007411   GO:0008045   GO:0031284   GO:0016020  

PANTHER

PTHR22625   PTHR22625:SF58  

SignalP

Position:   1 - 20,         Likelihood:  0.633071

 

 

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00153

Exp number, first 60 AAs:

0.00132

Total prob of N-in:

0.03170

outside

1  -  261

 

 

Pi

7.023135

Theta

8.019592

Tajima's D

-0.678351

CLR

2.523937

CSRT

0.206839658017099

Interpretation

Uncertain