Gene

KWMTBOMO11164

Pre Gene Modal

BGIBMGA008589

Annotation

PREDICTED:_connectin-like_[Bombyx_mori]

Location

Bomo_Chr18(+):15295883-15327483      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.614

CDS

ATGGACCTCAAATATCTGATCCTGATGATTGCACTTGCGACTATAGAAATAAATGTAACAGAAAGTAGACAAGATAAAAGGAGATGGAAAAATGATAAAGGACCGTATTCTCTTTACGTTAACGTCTGCGATATTCAAGATAGGGCATCTAAAGTGCACTGCTATTGCGAGAGCACTGACATCAAAACCGCGACGAAGGCAGATTGTTGGGTCTTCAACGGCGGCATCGCTGAAGACGACCCCTTTTGGTCAAACTTTTACTCACAGCCGCGAATTGAGAGACTGTCTTTTAACGTGAGAGCAGACGGCGGATTGACTTACATACCGGCCAAAGTCATAGTTAGATTAGAGAGGCTACAGTACCTGAATGTGCAGTATGCCAATATCTACAGTATCCCGTCGTTTGCTTTCACAAACTCGACGACCCTTCGAGAAGTTATTCTGCCCAAAAACAAAATAGCGAAGCTCGAAAAGATGTCATTCGCTCATCTCATAATGTTATTAAATGTTAGCTTAACAGAAAATCAGATATCGGAGTTGAAGCGAGACGTGTTTTATGTATTACCAAATCTCCAAAGGCTGGAACTCTCTAAGAATATCCTGAGCGTTCTGCATGACGGATGCTTCAAACATCTCAACAATTTGATCAAGCTGGATTTAGACCACAACCTGCTGACGGTCATCATCAGAGAGAACTTTCAGGGCTTGTCTAACCTCATCACACTGAACATGAGGAACAACAAATTAACTATGGTAGGGGACCTCGCCTTCGCCGAACTTTGGAGTCTTCAAGAACTTTACCTGGACGCAAATGAAATAGAATTTATATCCGAGAGGGGTTTCGGGGGATTGACTCAGCTTCGAAAACTTTATTTAGCCGATAATAAGTTGGCGACGTTAGACGAAGGAATTTTTGGCGATGTTCAGAAGTTGAACGTTTTGGATCTGAGGAACAATAAGTTGGAGACTCTGAAACAGGAGGCCGTTCAAAATGTTTTAGAAAACATGAAGTCGAATTATGCGGTAATCTCTCTCGACGGTAACAAATTGACGTGCGACTGTCGTCTATCATGGCTTCTGAAACTGCAAAATGAAACAAGAAGCAAGCGTCTCAGAGTCTCAATAAACCGTCTCAACTGTGTCGATGCAAAAAATAAGATTACCGCTGAACTTAAAATTGAAAACGATGACAAACTTAAGATAAAGAAGCAAGGTTCAGATTATGATGATGACAGTGATGAAATTAGCGATAAGTATTATGATGATGCGATGCAAGACCAAGAAAATGATTCTGGAGATAGTAAAGTTGAATACAGGAGGAGACTGACTGATATTCCAAAGGAATTTTTGGCTTGTCCCAATCGCTTGGTTCACGGCAGCACGTTTTCACCGCCTACCCAAGACGAGATAAAAGTTATCGAACAAGAAAATTATAAGTAA

Protein

MDLKYLILMIALATIEINVTESRQDKRRWKNDKGPYSLYVNVCDIQDRASKVHCYCESTDIKTATKADCWVFNGGIAEDDPFWSNFYSQPRIERLSFNVRADGGLTYIPAKVIVRLERLQYLNVQYANIYSIPSFAFTNSTTLREVILPKNKIAKLEKMSFAHLIMLLNVSLTENQISELKRDVFYVLPNLQRLELSKNILSVLHDGCFKHLNNLIKLDLDHNLLTVIIRENFQGLSNLITLNMRNNKLTMVGDLAFAELWSLQELYLDANEIEFISERGFGGLTQLRKLYLADNKLATLDEGIFGDVQKLNVLDLRNNKLETLKQEAVQNVLENMKSNYAVISLDGNKLTCDCRLSWLLKLQNETRSKRLRVSINRLNCVDAKNKITAELKIENDDKLKIKKQGSDYDDDSDEISDKYYDDAMQDQENDSGDSKVEYRRRLTDIPKEFLACPNRLVHGSTFSPPTQDEIKVIEQENYK

Uniprot

H9JGE2   A0A2H1VKA7   A0A0L7LJM4   A0A212EWB6   A0A2Z5U6Q8   A0A194RIU1   + More
A0A194QI49   A0A2A4JNA6   A0A0L7LRI8   A0A194RI53   A0A194QGQ1   A0A3S2NX82   A0A2H1X1V4   H9JFL1   A0A212F0E9   A0A2A4JHU6   A0A2H1WRJ5   A0A212FJY7   A0A3S2LY46   A0A194QGR0   H9JGE5   A0A194RII6   A0A0L7LT00   A0A2A4IZZ4   A0A194RI80   A0A2H1X0G1   A0A0L7LCW6   A0A2H1WWK7   A0A194QGJ2   A0A212EY84   H9JGC9   A0A3S2NQN6   A0A3S2P0I5   A0A194QMB6   A0A0L7KSB1   A0A1B6EUX6   A0A1B6IKB2   A0A2P9A985   D1ZZZ7   A0A088AP31   A0A1B6CMN5   A0A2J7RGY8   A0A194RMP0   A0A1Y1MUS6   A0A1Y1MUR2   E9I8W9   A0A0A9X110   A0A0P4W729   A0A154PP99   A0A1Y1KSF1   A0A1Y1KVT1   A0A182HFA7   A0A182U569   A0A182PKK5   A0A182XBB6   A0A182VZ11   A0A182I059   Q7PYM2   Q16QN1   A0A182KLR3   A0A336LLJ4   A0A182MKY2   A0A182R6D0   A0A182K4I7   K7J9L0   A0A182VJ73   B0X9P1   A0A182QL42   A0A182XVW5   A0A182NCF0   A0A182IMQ6   A0A084VHE4   A0A182FKT3   W5JPC6   A0A1J1II28   A0A182QPK5   A0A182PKK4   A0A182KLR6   A0A182XBB7   Q7PYM1   A0A182I060   A0A182UD95   A0A182UQE2   A0A182VZ10   A0A195C8C6   A0A182RWX6   A0A084VHF5   A0A182M1F9   A0A0L0BPG5   A0A2M4CL66   A0A2H8TM71   A0A0C9RLU0   A0A182JL45   A0A182NCE9   A0A2M4CQ17  

Pubmed

19121390    26227816    22118469    26354079    18362917    19820115    + More
28004739    21282665    25401762    26483478    12364791    14747013    17210077    17510324    20966253    20075255    25244985    24438588    20920257    23761445    26108605   

EMBL

BABH01033551    ODYU01002867    SOQ40882.1    JTDY01000864    KOB75625.1    AGBW02012044    + More
OWR45761.1    AP017473    BBB06699.1    KQ460154    KPJ17255.1    KQ458880    KPJ04605.1    NWSH01001048    PCG72923.1    JTDY01000246    KOB78072.1    KPJ17242.1    KPJ04594.1    RSAL01000035    RVE51318.1    ODYU01012753    SOQ59218.1    BABH01002360    AGBW02011096    OWR47219.1    NWSH01001336    PCG71627.1    ODYU01010456    SOQ55582.1    AGBW02008193    OWR54044.1    RSAL01000117    RVE46822.1    KPJ04604.1    BABH01033535    KPJ17254.1    JTDY01000194    KOB78356.1    NWSH01004345    PCG65199.1    KPJ17267.1    ODYU01012486    SOQ58819.1    JTDY01001654    KOB73240.1    ODYU01011209    SOQ56804.1    KPJ04617.1    AGBW02011598    OWR46445.1    BABH01033645    RSAL01000372    RVE42134.1    RSAL01000068    RVE49260.1    KPJ04616.1    JTDY01006497    KOB65961.1    GECZ01028051    GECZ01022424    GECZ01015237    GECZ01002416    JAS41718.1    JAS47345.1    JAS54532.1    JAS67353.1    GECU01020353    JAS87353.1    LT717637    SIW61629.1    KQ971338    EFA02447.2    GEDC01022564    GEDC01019421    GEDC01017721    JAS14734.1    JAS17877.1    JAS19577.1    NEVH01003750    PNF40092.1    KPJ17266.1    GEZM01020065    GEZM01020063    JAV89424.1    GEZM01020064    JAV89423.1    GL761662    EFZ22980.1    GBHO01029960    JAG13644.1    GDRN01085074    JAI61403.1    KQ435007    KZC13567.1    GEZM01076967    GEZM01076962    JAV63508.1    GEZM01076966    GEZM01076965    GEZM01076964    GEZM01076963    JAV63506.1    JXUM01036703    JXUM01036704    JXUM01036705    KQ561103    KXJ79693.1    APCN01002046    AAAB01008987    EAA01440.5    CH477742    EAT36704.1    UFQT01000045    SSX18826.1    AXCM01006762    AAZX01000839    AAZX01000840    AAZX01006519    AAZX01007690    AAZX01008680    AAZX01011027    AAZX01013578    AAZX01014261    AAZX01019149    AAZX01026081    DS232543    EDS43243.1    AXCN02000019    ATLV01013162    KE524842    KFB37388.1    ADMH02000940    ETN64619.1    CVRI01000049    CRK99188.1    AXCN02000020    EAA01419.5    APCN01002047    KQ978081    KYM97087.1    ATLV01013171    KFB37399.1    AXCM01004687    JRES01001653    KNC21124.1    GGFL01001797    MBW65975.1    GFXV01003448    MBW15253.1    GBYB01009225    JAG78992.1    GGFL01003246    MBW67424.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053240    UP000053268    UP000218220    + More
UP000283053    UP000007266    UP000005203    UP000235965    UP000076502    UP000069940    UP000249989    UP000075902    UP000075885    UP000076407    UP000075920    UP000075840    UP000007062    UP000008820    UP000075882    UP000075883    UP000075900    UP000075881    UP000002358    UP000075903    UP000002320    UP000075886    UP000076408    UP000075884    UP000075880    UP000030765    UP000069272    UP000000673    UP000183832    UP000078542    UP000037069   

PRIDE

H9JGE2    H9JFL1    H9JGE5    H9JGC9   

Pfam

PF13855   LRR_8        + More
PF00560   LRR_1
PF13306   LRR_5

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JGE2   A0A2H1VKA7   A0A0L7LJM4   A0A212EWB6   A0A2Z5U6Q8   A0A194RIU1   + More
A0A194QI49   A0A2A4JNA6   A0A0L7LRI8   A0A194RI53   A0A194QGQ1   A0A3S2NX82   A0A2H1X1V4   H9JFL1   A0A212F0E9   A0A2A4JHU6   A0A2H1WRJ5   A0A212FJY7   A0A3S2LY46   A0A194QGR0   H9JGE5   A0A194RII6   A0A0L7LT00   A0A2A4IZZ4   A0A194RI80   A0A2H1X0G1   A0A0L7LCW6   A0A2H1WWK7   A0A194QGJ2   A0A212EY84   H9JGC9   A0A3S2NQN6   A0A3S2P0I5   A0A194QMB6   A0A0L7KSB1   A0A1B6EUX6   A0A1B6IKB2   A0A2P9A985   D1ZZZ7   A0A088AP31   A0A1B6CMN5   A0A2J7RGY8   A0A194RMP0   A0A1Y1MUS6   A0A1Y1MUR2   E9I8W9   A0A0A9X110   A0A0P4W729   A0A154PP99   A0A1Y1KSF1   A0A1Y1KVT1   A0A182HFA7   A0A182U569   A0A182PKK5   A0A182XBB6   A0A182VZ11   A0A182I059   Q7PYM2   Q16QN1   A0A182KLR3   A0A336LLJ4   A0A182MKY2   A0A182R6D0   A0A182K4I7   K7J9L0   A0A182VJ73   B0X9P1   A0A182QL42   A0A182XVW5   A0A182NCF0   A0A182IMQ6   A0A084VHE4   A0A182FKT3   W5JPC6   A0A1J1II28   A0A182QPK5   A0A182PKK4   A0A182KLR6   A0A182XBB7   Q7PYM1   A0A182I060   A0A182UD95   A0A182UQE2   A0A182VZ10   A0A195C8C6   A0A182RWX6   A0A084VHF5   A0A182M1F9   A0A0L0BPG5   A0A2M4CL66   A0A2H8TM71   A0A0C9RLU0   A0A182JL45   A0A182NCE9   A0A2M4CQ17  

PDB

5A5C     E-value=7.84247e-28,     Score=309

KEGG

101738881    no KO assigned | (RefSeq) connectin-like

GO

GO:0016021   GO:0005515   GO:0008270   GO:0006468   GO:0007169   GO:0016020   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 22,         Likelihood:  0.991012

 

 

Length:

479

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0819899999999999

Exp number, first 60 AAs:

0.04829

Total prob of N-in:

0.00350

outside

1  -  479

 

 

Pi

2.810017

Theta

19.474544

Tajima's D

0.107867

CLR

0.686592

CSRT

0.406129693515324

Interpretation

Uncertain