SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11163  Validated by peptides from experiments
Annotation
PREDICTED:_uncharacterized_protein_LOC106108980_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 1.473 PlasmaMembrane   Reliability : 2.164
 

Sequence

CDS
ATGATGATAGTATTTAAAAAAGTTGTTGTGATTTTACTGTTTTCTATCGAATTTTCGTGCAGCTCGATGATCGACCTGACACAGAAGTGGATACCGAATGCTGGTTGGGAAGTGGATTGTCTGTGGACTCTAGTCGAGAACGACGAACTACAGTCGGTACGCCTCTACAATAATGGGCAGCAATTCTTTATTTACAGGCCAGAGATAAACGGCACATCAAAAAGTGAATACTACAGGACTAGGGCGTGGGACGTCAGGTGTCGTGAGACCTCCGAAAAAGGTGTGACAGGAGCGTGTGTAGTATCCGCAGAACTAATCAAGCCACCTCAGGATTTCAACTTCACGTGTGAAGTCTCCGGTGAGAGACCTACCTTCAGGATCGAAACGAAGAGCATTCTTGTTTCAGCTTCTGTACCGCCTAGCGACGCACACATCAGCGTTGCGACGATGGACTCTGAATCGGGCCGGGTCACCCTCAACTGTACGTCTAGCGGCCTGCCCTCGCCCACTCTTATCTGGACCATAGGAGCACAGAGGGTCCCTCCAGATTTCTCGAGCAGCGCATGGAACTATACAACCAAGGTGTACGACGCGTGGTCCGCGGTGTCATACTCGTGGGCGGACGCGGGTCTGCCGGCCACGTGCACGCCGGAGACGCACCGCCGCGGCCGCACCACCCCCGCCGCGCCCGCACAGTACAGCGGGGCCCGCGGAGGCGCAGGGGAGCGGGACCTAGTGGCGCTGGTGTTGGCGGTGGCGGCGCTGCTGTGA
Protein
MMIVFKKVVVILLFSIEFSCSSMIDLTQKWIPNAGWEVDCLWTLVENDELQSVRLYNNGQQFFIYRPEINGTSKSEYYRTRAWDVRCRETSEKGVTGACVVSAELIKPPQDFNFTCEVSGERPTFRIETKSILVSASVPPSDAHISVATMDSESGRVTLNCTSSGLPSPTLIWTIGAQRVPPDFSSSAWNYTTKVYDAWSAVSYSWADAGLPATCTPETHRRGRTTPAAPAQYSGARGGAGERDLVALVLAVAALL

Summary

Pfam
PF08205   C2-set_2        + More
PF07686   V-set
Interpro
IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013162   CD80_C2-set       
IPR013106   Ig_V-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.960307
 
 
Length:
256
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.39976
Exp number, first 60 AAs:
0.39497
Total prob of N-in:
0.06853
outside
1  -  256
 
 

Population Genetic Test Statistics

Pi
3.635063
Theta
18.116433
Tajima's D
-1.881459
CLR
13.637218
CSRT
0.0209489525523724
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 VYCGEIPNTIYSCIGNPK 96.30 6e-13
24402669 TTIVVEAMK 100.00 0.034
28467696 TTPAAADVEK 100.00 0.034
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