SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11155
Pre Gene Modal
BGIBMGA008598
Annotation
Uncharacterized_protein_OBRU01_11894_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 2.188 Nuclear   Reliability : 1.957
 

Sequence

CDS
ATGAAGTTTCTATGGTACTTCATCGCCGTGATGACGGTAGCTGAATCAGCAGTGGATATCGAGAAAACAGTGAAACAAGTACAAAATATTTTGCAGTCACATTCTGAGCTCCCTAGACTTACCCGCGAAGAGATCATACAGCTGATGAATGACATCAAAGCTGAAGACGAAAAAACGTCAACATCGAAACAAAGCAGTAAAGAGAGCAATGAAATTAAAATCACAACACCTTACAGTACATCAGACAATGAAATATATTCAGTAACGCAGACGATAAAAAATGAGGAAATTTTACTGATAAATGATGTGGCTTCAGTTCAACCAGACACACTTGAGGCAACGACAAAGAAAAGTGAACCATCTCTAACCGTTGTACTTCCTTATACTCCTAGAGACGGATCTTCATTACAAGAGCTATACACTAGACCACCAAGAGTTGAAATTGTGCCTGCTTCTGAAGTAACTCCGCAGCCAATCAAAACATCCGATATAAATCAAATACAAATTAATAACGTAAATAAACAGAAAGAAGACTTCACTGCGGAATTGAGGGCATTTTTAGATGCTCATGGTTTGAAAGCTAAACCGGGACAAGATCACTTCTTGCTCCCTCTAGAAGGTTTCAAGCCATTGCCGCCGGCAAAAATAATTGACGGTAATATTGATTTACCAGAAAATATTCTTTTAACTTACGATTTGATTTCACCAGCAGAACTAAAAGCCAGTAAAGTTCAAACTATTTCACCTACGAATTTTTTGTACGAACCTCTTCGTCCAGAGATTCCATTTGAATTAGACACTTCATCATCTGAAATCAAAGAGGTAGTCTATCCTTATGACATGCCGAAGAGTAGAAAACCAAAGTCTGCACCGAATTATGAGCCAATCGACTACGACTCCGTCAAAGTAATTCCTTTAAACAAAGGTATTAACCCGATCGAAGACGTAAAATTTACTGTTGAAAATGAACAGAGCAAAAGACAGACCAATAGTACTGATGTTACTGAAGCTTCTATAACTACTGAGGAACCAAAAGCAGCTAGTGATACTGTTCAAGACTCTTCACCTTCTCCTATTCCGGATGACGCCGGAGCGTCTATAGCAGATCTGGAGGATTCTTTCGGAGGAGCAGCACCGTCTCTGCCCGGGGATTCCGAATTGCCGCCTCCAAGGAAGAACGGCTTTTACTGGATGCTTGATTGGAATAGTTTTCTAGAAGTAGGAGACGGTGATACAAAAGTGAATATACGTTTCGAACCAAAACTCGGAGACCCGCAGATGTTCCTGCCTGTAACGGTTCCCTAA
Protein
MKFLWYFIAVMTVAESAVDIEKTVKQVQNILQSHSELPRLTREEIIQLMNDIKAEDEKTSTSKQSSKESNEIKITTPYSTSDNEIYSVTQTIKNEEILLINDVASVQPDTLEATTKKSEPSLTVVLPYTPRDGSSLQELYTRPPRVEIVPASEVTPQPIKTSDINQIQINNVNKQKEDFTAELRAFLDAHGLKAKPGQDHFLLPLEGFKPLPPAKIIDGNIDLPENILLTYDLISPAELKASKVQTISPTNFLYEPLRPEIPFELDTSSSEIKEVVYPYDMPKSRKPKSAPNYEPIDYDSVKVIPLNKGINPIEDVKFTVENEQSKRQTNSTDVTEASITTEEPKAASDTVQDSSPSPIPDDAGASIADLEDSFGGAAPSLPGDSELPPPRKNGFYWMLDWNSFLEVGDGDTKVNIRFEPKLGDPQMFLPVTVP

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.979045
 
 
Length:
434
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01967
Exp number, first 60 AAs:
0.01967
Total prob of N-in:
0.00289
outside
1  -  434
 
 

Population Genetic Test Statistics

Pi
30.576421
Theta
26.839748
Tajima's D
0.303388
CLR
1.107618
CSRT
0.454677266136693
Interpretation
Uncertain
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