SGID The Silkworm Genome Information Database
Gene
KWMTBOMO11154
Pre Gene Modal
BGIBMGA008599
Annotation
hypothetical_protein_KGM_07411_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 2.997
 

Sequence

CDS
ATGTTGATTTGTGCTCAACTGAGGCCACCCGAGGAACAAGACCGTGGTGCAAGGAAGAAAGCTCTCAAAGACGCTGTAATATGTATTGGCTGGTTGAAAATTGTGTCGATAATATGCTACATGATTTTGTATTACCTGGTCCGCGCCAATAGCGAAGGTGGTATGTCCAATGTCCTCCAGAGCTTAACCCTGGCGATATTACCACCGCAGATAGTGCACGGGATACTCCTCTTCTTGGGAGCTCTTGAAGTAAGACAGTTTTTATTTGCTTAG
Protein
MLICAQLRPPEEQDRGARKKALKDAVICIGWLKIVSIICYMILYYLVRANSEGGMSNVLQSLTLAILPPQIVHGILLFLGALEVRQFLFA

Summary

Ontologies

Topology

Length:
90
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.6548
Exp number, first 60 AAs:
23.25651
Total prob of N-in:
0.98142
POSSIBLE N-term signal
sequence
inside
1  -  24
TMhelix
25  -  47
outside
48  -  61
TMhelix
62  -  84
inside
85  -  90
 
 

Population Genetic Test Statistics

Pi
3.785685
Theta
12.382896
Tajima's D
-1.955686
CLR
582.76513
CSRT
0.0148992550372481
Interpretation
Possibly Positive selection
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