Gene

KWMTBOMO11152

Pre Gene Modal

BGIBMGA008583

Annotation

PREDICTED:_connectin-like_[Bombyx_mori]

Location

Bomo_Chr18(+):14907208-14911298      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.219

CDS

ATGAGCTGGCGCCGAATCTTGTTGGAATACCCAGTGCCTGTTATTGAACATGGTATGAAAAACAGGTTCCACAAGGTGGGAGGTATGCGGGCGCATAAGGTACCCGCTACCCTGCTACTGTTGCTTTTCGCAATAGAAGCAATGGACGCCAACAGAAGGAAGCAGAAAGACAAAACCCCACCAGCGACCAACATCTGTGACATCAGCGATCGTGATTCTAAGGTCCATTGCTATTGCGAATATAGTCAAGAGATAAATGAAGCTATCAAAACAGAATGCTGGGTCTTTAATGGCGGTATAGAGAAATCGGATCCACTTTGGCCGAGTTTCATTTCTCAGTCGAACGTTGAGGTCCTAGCGTTTAATGTAAGAGCAGACGGTGGTTTGGATTTTGTGCCGTCCAAAGTATTCAGGTATTTAAGGAAAATTAAGCAATTCGCCATAAAATACAGCTCAATAAGAAAAATAGACAGCTACACCTTTGTCAACATGACATCAGTCAACGAAATAACCATGACCAAGAACCAAATTGTGATCTTGAGTAAGCATTCATTTTACAACCTGCCAAATTTGACTGTACTTACTTTAGATGAGAACAGGATAAATGAGCTGGCTTCGGAGACGTTTTACGAGCTTCCGTCTCTTCAGAAGCTGTATCTGACAAGTAATAACATAAGTGTCATACATGATGGCGCTTTCAAACATCTAGTCAATCTTGCAGACTTAGAACTGGACAGAAACAACGTGAGCGAACTGAAGAAGGAATGTTTCGACGGCCTGGCCAACCTGAAGCGTTTAGATTTAAGAAGAAACAAACTGACAGTCCTAAATTCATTCACGTTCACGGAGTTATGGAACTTACAGTCGTTGTTGTTAGATTATAATGAGATTTATATCTTGGCTCAGAGGACTTTTGATGGGTTATCGCAATTGCGGAAGTTGAGCCTGAGTCATAACAAGCTTGTGACACTTGCTGATGGACTCTTTGAAGGCGTCAGGGGATTGTCAGCGTTAGACCTGCGGCATAACAAGCTTAAAAGGTTCACGTTTGATAATCTAAGGCCCATTTATGATAATTTGAAGAATCAAAATAGCTACATCTATTTGAAAGGGAATAAGCTAGCGTGCGACTGCCATCTCGCATGGATGCATAAGCTACGTCACGAGGCGAAGAGCGTCAAAGTACGAACCTCACTCGAGAATTTCGTTTGCAAATTCACGGGCGACCCATCTTTGAGTTCACACTTTACTTATTTCGAAAGGAATATTATCGGCTCAAACGATTTGTACGAAGTCGACGTCAAAAGTGAAATGAAAGATTATTCGGATAATCCAGATGATTTTGTTCATGATGAAACGGAAGACACTTATGTTGATGAACCTAAATCTGTTAAAGAAGACGATGAGAGGACTCTTTTACAGATACCGGTGGAGACGCTCCCCTGCCCTCAAGACGTGAAAAGCGTCACCGACCGTACTTACACGTATCCTTCACAAAACGAGGCCAAAGATTATAGAAATTTAATACAATCAACCTCGACTAGACTATCAATGAACAAACAGCTCTTTTTTATACAAAAGAAAAACGTTCAGATAACTAACCCTGAACGCCTTAACAATAATGCTCTAGTTCAAATGTGCCATTTAGATTACTAA

Protein

MSWRRILLEYPVPVIEHGMKNRFHKVGGMRAHKVPATLLLLLFAIEAMDANRRKQKDKTPPATNICDISDRDSKVHCYCEYSQEINEAIKTECWVFNGGIEKSDPLWPSFISQSNVEVLAFNVRADGGLDFVPSKVFRYLRKIKQFAIKYSSIRKIDSYTFVNMTSVNEITMTKNQIVILSKHSFYNLPNLTVLTLDENRINELASETFYELPSLQKLYLTSNNISVIHDGAFKHLVNLADLELDRNNVSELKKECFDGLANLKRLDLRRNKLTVLNSFTFTELWNLQSLLLDYNEIYILAQRTFDGLSQLRKLSLSHNKLVTLADGLFEGVRGLSALDLRHNKLKRFTFDNLRPIYDNLKNQNSYIYLKGNKLACDCHLAWMHKLRHEAKSVKVRTSLENFVCKFTGDPSLSSHFTYFERNIIGSNDLYEVDVKSEMKDYSDNPDDFVHDETEDTYVDEPKSVKEDDERTLLQIPVETLPCPQDVKSVTDRTYTYPSQNEAKDYRNLIQSTSTRLSMNKQLFFIQKKNVQITNPERLNNNALVQMCHLDY

Uniprot

A0A2H1X0G1   A0A3S2NQN6   A0A0L7LCW6   A0A194QMB6   A0A194RMP0   A0A194RI80   + More
A0A194QGJ2   A0A212EY84   A0A3S2P0I5   A0A2A4IZZ4   H9JGC9   A0A2H1WWK7   A0A2H1VKA7   A0A0L7KSB1   A0A2Z5U6Q8   H9JGE2   A0A194RI53   A0A0L7LRI8   A0A0L7LJM4   A0A194QGQ1   A0A194RIU1   A0A2A4JHU6   A0A212EWB6   A0A2A4JNA6   A0A2H1WRJ5   A0A3S2LY46   A0A194QI49   H9JGE5   A0A2P9A985   A0A194QGR0   A0A194RII6   A0A212FJY7   D1ZZZ7   A0A0L7LT00   A0A3S2NX82   A0A1B6EUX6   A0A1B6IKB2   E9I8W9   A0A212F0E9   A0A195F1M2   A0A195C8C6   A0A1B6CMN5   A0A195BFM6   A0A195EJP1   A0A154PP99   A0A1Y1KSF1   A0A1Y1KVT1   A0A0A9X110   A0A1Y1MUS6   A0A088AP31   A0A1Y1MUR2   A0A151XJR9   A0A084VHF5   A0A182JL45   A0A182QPK5   A0A336LLJ4   A0A182PKK4   Q7PYM1   A0A182I060   A0A182VZ10   A0A182KLR6   A0A182UQE2   A0A182M1F9   A0A182RWX6   A0A182NCE9   F4X3V6   A0A0P4W729   B0X9P1   A0A182I059   A0A182XBB6   A0A182U569   A0A182KLR3   Q7PYM2   A0A182VJ73   A0A182VZ11   A0A182MKY2   A0A182R6D0   A0A182K4I7   A0A182NCF0   A0A182XVW5   A0A1J1IJF1   A0A182PKK5  

Pubmed

26227816    26354079    22118469    19121390    18362917    19820115    + More
21282665    28004739    25401762    24438588    12364791    14747013    17210077    20966253    21719571    25244985   

EMBL

ODYU01012486    SOQ58819.1    RSAL01000372    RVE42134.1    JTDY01001654    KOB73240.1    + More
KQ458880    KPJ04616.1    KQ460154    KPJ17266.1    KPJ17267.1    KPJ04617.1    AGBW02011598    OWR46445.1    RSAL01000068    RVE49260.1    NWSH01004345    PCG65199.1    BABH01033645    ODYU01011209    SOQ56804.1    ODYU01002867    SOQ40882.1    JTDY01006497    KOB65961.1    AP017473    BBB06699.1    BABH01033551    KPJ17242.1    JTDY01000246    KOB78072.1    JTDY01000864    KOB75625.1    KPJ04594.1    KPJ17255.1    NWSH01001336    PCG71627.1    AGBW02012044    OWR45761.1    NWSH01001048    PCG72923.1    ODYU01010456    SOQ55582.1    RSAL01000117    RVE46822.1    KPJ04605.1    BABH01033535    LT717637    SIW61629.1    KPJ04604.1    KPJ17254.1    AGBW02008193    OWR54044.1    KQ971338    EFA02447.2    JTDY01000194    KOB78356.1    RSAL01000035    RVE51318.1    GECZ01028051    GECZ01022424    GECZ01015237    GECZ01002416    JAS41718.1    JAS47345.1    JAS54532.1    JAS67353.1    GECU01020353    JAS87353.1    GL761662    EFZ22980.1    AGBW02011096    OWR47219.1    KQ981856    KYN34475.1    KQ978081    KYM97087.1    GEDC01022564    GEDC01019421    GEDC01017721    JAS14734.1    JAS17877.1    JAS19577.1    KQ976490    KYM83385.1    KQ978782    KYN28470.1    KQ435007    KZC13567.1    GEZM01076967    GEZM01076962    JAV63508.1    GEZM01076966    GEZM01076965    GEZM01076964    GEZM01076963    JAV63506.1    GBHO01029960    JAG13644.1    GEZM01020065    GEZM01020063    JAV89424.1    GEZM01020064    JAV89423.1    KQ982074    KYQ60528.1    ATLV01013171    KE524842    KFB37399.1    AXCN02000020    UFQT01000045    SSX18826.1    AAAB01008987    EAA01419.5    APCN01002047    AXCM01004687    GL888624    EGI58903.1    GDRN01085074    JAI61403.1    DS232543    EDS43243.1    APCN01002046    EAA01440.5    AXCM01006762    CVRI01000049    CRK99190.1   

Proteomes

UP000283053    UP000037510    UP000053268    UP000053240    UP000007151    UP000218220    + More
UP000005204    UP000007266    UP000078541    UP000078542    UP000078540    UP000078492    UP000076502    UP000005203    UP000075809    UP000030765    UP000075880    UP000075886    UP000075885    UP000007062    UP000075840    UP000075920    UP000075882    UP000075903    UP000075883    UP000075900    UP000075884    UP000007755    UP000002320    UP000076407    UP000075902    UP000075881    UP000076408    UP000183832   

PRIDE

H9JGC9    H9JGE2    H9JGE5   

Pfam

PF13855   LRR_8        + More
PF13306   LRR_5
PF00560   LRR_1

Interpro

IPR003591   Leu-rich_rpt_typical-subtyp        + More
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A2H1X0G1   A0A3S2NQN6   A0A0L7LCW6   A0A194QMB6   A0A194RMP0   A0A194RI80   + More
A0A194QGJ2   A0A212EY84   A0A3S2P0I5   A0A2A4IZZ4   H9JGC9   A0A2H1WWK7   A0A2H1VKA7   A0A0L7KSB1   A0A2Z5U6Q8   H9JGE2   A0A194RI53   A0A0L7LRI8   A0A0L7LJM4   A0A194QGQ1   A0A194RIU1   A0A2A4JHU6   A0A212EWB6   A0A2A4JNA6   A0A2H1WRJ5   A0A3S2LY46   A0A194QI49   H9JGE5   A0A2P9A985   A0A194QGR0   A0A194RII6   A0A212FJY7   D1ZZZ7   A0A0L7LT00   A0A3S2NX82   A0A1B6EUX6   A0A1B6IKB2   E9I8W9   A0A212F0E9   A0A195F1M2   A0A195C8C6   A0A1B6CMN5   A0A195BFM6   A0A195EJP1   A0A154PP99   A0A1Y1KSF1   A0A1Y1KVT1   A0A0A9X110   A0A1Y1MUS6   A0A088AP31   A0A1Y1MUR2   A0A151XJR9   A0A084VHF5   A0A182JL45   A0A182QPK5   A0A336LLJ4   A0A182PKK4   Q7PYM1   A0A182I060   A0A182VZ10   A0A182KLR6   A0A182UQE2   A0A182M1F9   A0A182RWX6   A0A182NCE9   F4X3V6   A0A0P4W729   B0X9P1   A0A182I059   A0A182XBB6   A0A182U569   A0A182KLR3   Q7PYM2   A0A182VJ73   A0A182VZ11   A0A182MKY2   A0A182R6D0   A0A182K4I7   A0A182NCF0   A0A182XVW5   A0A1J1IJF1   A0A182PKK5  

PDB

4U7L     E-value=6.50044e-23,     Score=267

KEGG

101739448    no KO assigned | (RefSeq) connectin-like

GO

GO:0016021   GO:0005515   GO:0016740   GO:0003824   GO:0016491   GO:0045239   GO:0006811   GO:0005622   GO:0006810  

Length:

551

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.14899

Exp number, first 60 AAs:

1.13923

Total prob of N-in:

0.05623

outside

1  -  551

 

 

Pi

0.646182

Theta

5.295022

Tajima's D

-2.377792

CLR

491.4565

CSRT

0.00109994500274986

Interpretation

Possibly Positive selection