Gene

KWMTBOMO11144  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008602

Annotation

p260_[Bombyx_mori]

Location

Bomo_Chr18(-):14591670-14594133      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.577

CDS

ATGCGGGAACCCAAACTTTTAACGTCAAATATATTTAACAAAGGTCCTGATTACTTTACTGACCTACAACGCTACAAAAGCAGCATACCTCATTTAGTGCTAGCATCTGGTAGACAGAATAACTGCGTAGAGAAGATTTTCGAATCACTAAAGAATAGACCCGTTGATGCCGAGCAAATTGCACTGATACACGACATCCATGATTACGAGATAGCTGGACATATGTGCAGAGGATACATAATACTTGAAAACAATGAGAACAATGAAACCGTCTGCCTCACTGAAAGCATAGAGTACTGCCCAGGTATTACTCGTCCGGTGTGGTTCGTCTACAGTGGAATGGGAAGCCAATGGGCTGGTATGGGAGCTGAATTAATGAGGATTCCTGTATTTGCTGCTGCTATTGAAAAATGCCACAAAGTTCTCGCGCCCAAGGGTATTGATATCGTCCGCATCCTGTGTGAACCAGATAAAACTATCTTTGACAACATTCTCCATTCATTTGTTGGAATTGCTGCTGTCCAGATCGGACTTACTGATGTCTTGAGAGAAATAGGAATAGTTCCTGATCACATCATTGGTAAGTGA

Protein

MREPKLLTSNIFNKGPDYFTDLQRYKSSIPHLVLASGRQNNCVEKIFESLKNRPVDAEQIALIHDIHDYEIAGHMCRGYIILENNENNETVCLTESIEYCPGITRPVWFVYSGMGSQWAGMGAELMRIPVFAAAIEKCHKVLAPKGIDIVRILCEPDKTIFDNILHSFVGIAAVQIGLTDVLREIGIVPDHIIGK

Uniprot

H9JGF5   O01677   A0A0L7LMW6   A0A2H1WC87   A0A0L7LNK4   A0A2A4JTZ4   + More
A0A212EWU6   A0A3S2NJM7   A0A2A4IZ90   A0A2H1X0Z8   A0A3S2M8J0   A0A3S2P698   A0A2A4K3Y0   A0A194PKD7   A0A0L7L2S0   A0A0L7L2W8   A0A0L7L9U1   A0A2A4K3Y5   H9JUD8   A0A2H1WNC5   A0A0L7L1N0   H9JUE0   A0A0N1I4Z6   A0A2A4K4K9   A0A2A4JVR3   H9JU34   A0A2W1BEL1   A0A0L7L2S3   A0A2H1V636   A0A3S2LA71   A0A2A4J169   A0A2A4J2W6   O01678   A0A2A4K5B4   A0A194Q6Q7   A0A2H1V181   A0A2H1WWR5   A0A0N1IP09   A0A0L7LTQ0   A0A212FMU5   A0A1B6LEY2   A0A1B6GA85   A0A1B6JP24   A0A1B6IHH2   A0A2H1VF66   A0A0L7K4H4   A0A1B6CGM1   A0A151X6P9   E9IT55   A0A195F360   A0A151JRB8   A0A194QF04   A0A194QF64   A0A194QFD5   A0A0C9Q3R4   A0A158NZW8   F4WIF1   A0A194QVD5   A0A2J7PQX7   A0A195BMY6   A0A195CP13   A0A0J7NXT7   A0A067RHL3   A0A232F4D3   D6WBV1   E2ADN8   A0A232EXB1   U4U7H8   A0A026WNV9   A0A2J7PFW7   K7IZC9   A0A1A9XHP8   A0A1J1IKA4   A0A336L600   A0A1Y1N3M9   A0A1B0G1J3   A0A1B0FKI3   A0A067R4G1   A0A1A9XHQ3   A0A1A9UN37   A0A0L7LPX1   K7IZC8   A0A1B0AA78   A0A1B0AA77   A0A0M8ZRC2   A0A1B6JFS6   A0A1A9UN58   A0A1A9XHP6   A0A154PMH1   E2B583   A0A1A9W883   B4K3G8   A0A088ALX8   B4LXF7   A0A0L0BQ63   A0A1A9UN51   B4NIW4   A0A1A9W885   B4K189   A0A1B0AA69  

Pubmed

19121390    26227816    22118469    26354079    28756777    21282665    + More
21347285    21719571    24845553    28648823    18362917    19820115    20798317    23537049    24508170    20075255    28004739    17994087    26108605   

EMBL

BABH01033637    U67866    AAB53257.1    JTDY01000529    KOB76787.1    ODYU01007677    + More
SOQ50673.1    KOB76786.1    NWSH01000591    PCG75471.1    AGBW02011888    OWR45966.1    RSAL01000068    RVE49259.1    NWSH01005017    PCG64490.1    ODYU01012610    SOQ59025.1    RSAL01000013    RVE53445.1    RVE53442.1    NWSH01000156    PCG78965.1    KQ459602    KPI93194.1    JTDY01003335    KOB69710.1    JTDY01003263    KOB69848.1    JTDY01002046    KOB72242.1    PCG78967.1    BABH01022903    ODYU01009787    SOQ54442.1    JTDY01003650    KOB69211.1    BABH01022894    BABH01022895    BABH01022896    BABH01022897    KQ461178    KPJ07769.1    PCG78966.1    PCG75472.1    BABH01003986    KZ150116    PZC73268.1    JTDY01003390    KOB69631.1    ODYU01000872    SOQ36288.1    RSAL01000071    RVE49124.1    NWSH01003873    PCG65731.1    PCG65733.1    U67867    AAB53258.1    PCG78963.1    KQ459582    KPI99075.1    ODYU01000212    SOQ34605.1    ODYU01011246    SOQ56864.1    KQ460651    KPJ13003.1    JTDY01000102    KOB78858.1    AGBW02007651    OWR55047.1    GEBQ01017893    JAT22084.1    GECZ01010430    JAS59339.1    GECU01006695    JAT01012.1    GECU01021338    JAS86368.1    ODYU01002244    SOQ39469.1    JTDY01011828    KOB52382.1    GEDC01024813    JAS12485.1    KQ982480    KYQ55999.1    GL765434    EFZ16301.1    KQ981856    KYN34617.1    KQ978607    KYN29892.1    KQ459053    KPJ04123.1    KPJ04122.1    KPJ04124.1    GBYB01008708    JAG78475.1    ADTU01005072    ADTU01005073    ADTU01005074    ADTU01005075    GL888175    EGI66082.1    KQ461073    KPJ09498.1    NEVH01022635    PNF18741.1    KQ976440    KYM86527.1    KQ977574    KYN01849.1    LBMM01000911    KMQ97230.1    KK852680    KDR18643.1    NNAY01001038    OXU25389.1    KQ971314    EEZ97866.2    GL438820    EFN68400.1    NNAY01001760    OXU23004.1    KB631760    ERL85885.1    KK107139    EZA57700.1    NEVH01025646    PNF15229.1    CVRI01000051    CRK99510.1    UFQS01001117    UFQT01001117    SSX09070.1    SSX28981.1    GEZM01013544    JAV92493.1    CCAG010017947    CCAG010001609    KK852983    KDR12868.1    JTDY01000426    KOB77236.1    KQ435885    KOX69550.1    GECU01009677    JAS98029.1    KQ434960    KZC12654.1    GL445739    EFN89136.1    CH922465    EDV99508.1    CH940650    EDW67835.2    JRES01001625    KNC21349.1    CH964272    EDW84866.1    CH916858    EDV91606.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000283053    UP000053268    + More
UP000053240    UP000075809    UP000078541    UP000078492    UP000005205    UP000007755    UP000235965    UP000078540    UP000078542    UP000036403    UP000027135    UP000215335    UP000007266    UP000000311    UP000030742    UP000053097    UP000002358    UP000092443    UP000183832    UP000092444    UP000078200    UP000092445    UP000053105    UP000076502    UP000008237    UP000091820    UP000001070    UP000005203    UP000008792    UP000037069    UP000007798   

PRIDE

H9JGF5    O01677    H9JUD8    H9JUE0    H9JU34    O01678    + More
A0A088ALX8   

Pfam

PF00975   Thioesterase        + More
PF00698   Acyl_transf_1
PF16197   KAsynt_C_assoc
PF00109   ketoacyl-synt
PF14765   PS-DH
PF02801   Ketoacyl-synt_C
PF00107   ADH_zinc_N
PF08659   KR
PF00550   PP-binding

Interpro

IPR016039   Thiolase-like        + More
IPR020843   PKS_ER       
IPR014030   Ketoacyl_synth_N       
IPR020801   PKS_acyl_transferase       
IPR020841   PKS_Beta-ketoAc_synthase_dom       
IPR020807   PKS_dehydratase       
IPR001227   Ac_transferase_dom_sf       
IPR029058   AB_hydrolase       
IPR016036   Malonyl_transacylase_ACP-bd       
IPR014031   Ketoacyl_synth_C       
IPR023102   Fatty_acid_synthase_dom_2       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR032821   KAsynt_C_assoc       
IPR042104   PKS_dehydratase_sf       
IPR011032   GroES-like_sf       
IPR001031   Thioesterase       
IPR014043   Acyl_transferase       
IPR036291   NAD(P)-bd_dom_sf       
IPR018201   Ketoacyl_synth_AS       
IPR013149   ADH_C       
IPR013968   PKS_KR       
IPR036736   ACP-like_sf       
IPR020806   PKS_PP-bd       
IPR009081   PP-bd_ACP       
IPR006162   Ppantetheine_attach_site       

SUPFAM

SSF53474   SSF53474        + More
SSF53901   SSF53901       
SSF51735   SSF51735       
SSF52151   SSF52151       
SSF55048   SSF55048       
SSF50129   SSF50129       
SSF47336   SSF47336       

Gene 3D

1.10.1470.20     3.10.129.110     3.40.366.10     3.40.47.10     3.40.50.1820     1.10.1200.10    

ProteinModelPortal

H9JGF5   O01677   A0A0L7LMW6   A0A2H1WC87   A0A0L7LNK4   A0A2A4JTZ4   + More
A0A212EWU6   A0A3S2NJM7   A0A2A4IZ90   A0A2H1X0Z8   A0A3S2M8J0   A0A3S2P698   A0A2A4K3Y0   A0A194PKD7   A0A0L7L2S0   A0A0L7L2W8   A0A0L7L9U1   A0A2A4K3Y5   H9JUD8   A0A2H1WNC5   A0A0L7L1N0   H9JUE0   A0A0N1I4Z6   A0A2A4K4K9   A0A2A4JVR3   H9JU34   A0A2W1BEL1   A0A0L7L2S3   A0A2H1V636   A0A3S2LA71   A0A2A4J169   A0A2A4J2W6   O01678   A0A2A4K5B4   A0A194Q6Q7   A0A2H1V181   A0A2H1WWR5   A0A0N1IP09   A0A0L7LTQ0   A0A212FMU5   A0A1B6LEY2   A0A1B6GA85   A0A1B6JP24   A0A1B6IHH2   A0A2H1VF66   A0A0L7K4H4   A0A1B6CGM1   A0A151X6P9   E9IT55   A0A195F360   A0A151JRB8   A0A194QF04   A0A194QF64   A0A194QFD5   A0A0C9Q3R4   A0A158NZW8   F4WIF1   A0A194QVD5   A0A2J7PQX7   A0A195BMY6   A0A195CP13   A0A0J7NXT7   A0A067RHL3   A0A232F4D3   D6WBV1   E2ADN8   A0A232EXB1   U4U7H8   A0A026WNV9   A0A2J7PFW7   K7IZC9   A0A1A9XHP8   A0A1J1IKA4   A0A336L600   A0A1Y1N3M9   A0A1B0G1J3   A0A1B0FKI3   A0A067R4G1   A0A1A9XHQ3   A0A1A9UN37   A0A0L7LPX1   K7IZC8   A0A1B0AA78   A0A1B0AA77   A0A0M8ZRC2   A0A1B6JFS6   A0A1A9UN58   A0A1A9XHP6   A0A154PMH1   E2B583   A0A1A9W883   B4K3G8   A0A088ALX8   B4LXF7   A0A0L0BQ63   A0A1A9UN51   B4NIW4   A0A1A9W885   B4K189   A0A1B0AA69  

PDB

3HHD     E-value=1.1485e-26,     Score=294

KEGG

693037    K00665 fatty acid synthase, animal type [EC:2.3.1.85] | (RefSeq) p260

PATHWAY

00061    Fatty acid biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016788   GO:0009058   GO:0004312   GO:0016491   GO:0016740   GO:0003824   GO:0031177   GO:0016021   GO:0008152   GO:0006106   GO:0045239   GO:0006811   GO:0005622   GO:0006810  

Length:

195

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.20428

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08805

outside

1  -  195

 

 

Pi

13.8089

Theta

26.863814

Tajima's D

-1.591923

CLR

0.214824

CSRT

0.0454977251137443

Interpretation

Uncertain