Gene

KWMTBOMO11138

Pre Gene Modal

BGIBMGA008576

Annotation

PREDICTED:_connectin-like_[Bombyx_mori]

Location

Bomo_Chr18(+):14489854-14491862      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.964

CDS

ATGGAGAGACGCGTCGCCGGAGTCATCTACATACTAATCACGTTCGCTTTGGTTAATGAGATGTCGATGAACGTGCAGGCCAGGGACAGCAGCAAACGGAGAACGAAAGAGAGGTCAGGAGGATTTCAGGACAACATTTGCGACATAACAGACAGGGACTCAAAAGTGCATTGCTATTGCGAAAACACCAGGGAACCGAGGAATGCGACTAAAGCGGAATGCTGGATATTCAATGGCGGAATTCCTCGCGACGACCTCGTCTGGCAAAGTTTCGCTTCTCAGCCCACTTTGCAAGCATTGTCTTTCAACGTTCGAGTCGAAGGCGCTTTGAGCTACGTGCCGACCAAAGCTCTGATGTACTTACCGCGTCTCAGATCCATCAATATAAAATACGGAAATATTTTAGAAGTATCATCTTTTGCTTTCGCTAATCTCACCCATTTGAGAGAAACTGGCTTATCGCAGAATCAAATAGAAACATTACAGCAGTATTCGTTCGCTCACTTGCCAAATGTAACGACGATAAATTTAGAAGATAATACGATTTTAGACATAGACGCGGAGGCCTTTTATGACGTGCCGAAACTACAAAAGCTGGTGTTCACGAAAAACAATATATCAACGATAAGGAATGGGACGTTCCAACACACGTTCAATCTATTGGAGTTGGATTTGAATAAAAATAATATATACAATTTGAATCGTCGCACATTTGATGGATTAGCGAACTTGAGGAAATTGGACCTGCGAAAGAATAGAATACAGAATCTGACCGAATTCACTTTTGCCGAGCTATGGAACTTGCAGGAGCTGTTACTGGGAAAAAACGATTTGAAATTCATTTCTGAAAGGGCGTTCGACGGATTATCGCAGTTACGGAAACTGTCCCTGGACGATAATAAGCTTGGGTCCCTACCGTCTGGCTTATTTGAGGGAGTGCGGGGCCTGAGTTCGCTGGACCTGCGTTCGAACGAGCTTCACGCTTTGACTTACGACAATATCAAACCGATCCTCGATAATTTGAAGCCGCAGAATAGCAACTTGCTGCTCGAAGATAACAGCTTTGTATGCAATTGCAATTTAAAATGGATGCATGCCTTGAGGAATGAAACGAAAAGTCAGAACACTAAGGATTCGTTAGAGAACGTGACATGTAGACTGGACCCACCAATCGTCAGCTCTGCTTACAACAAAATACCCGAAACGGACAATGCACCTTTCAACCAGGAGATCCTGCACGCTGGACTGACCATAGAAACCCTCAACGAGAAGATGAACATAACGGAGAAGAAAGGAGATCTCAAGGACATCGTCGAAGCCGCCAATGAAATCCAAACGAAGAAGGGAGTTAAAAGGAATGTTTTGAAATTTCCCCCGGAAACTTTACCATGTCCCAGGGAGGTCGTTAAGACCACCGAGGCTCCTACATTTATAATCGATCCAGTTATTCCAATACAGAACGAAATGAAAACGTATAGGTATCATGAAATGAATTCTGGTCACGGCCTGTCGCTTAGATTTAGCATAGTGTTATATAACATCTGTTTAGCTTTCTTTTTCACTTAG

Protein

MERRVAGVIYILITFALVNEMSMNVQARDSSKRRTKERSGGFQDNICDITDRDSKVHCYCENTREPRNATKAECWIFNGGIPRDDLVWQSFASQPTLQALSFNVRVEGALSYVPTKALMYLPRLRSINIKYGNILEVSSFAFANLTHLRETGLSQNQIETLQQYSFAHLPNVTTINLEDNTILDIDAEAFYDVPKLQKLVFTKNNISTIRNGTFQHTFNLLELDLNKNNIYNLNRRTFDGLANLRKLDLRKNRIQNLTEFTFAELWNLQELLLGKNDLKFISERAFDGLSQLRKLSLDDNKLGSLPSGLFEGVRGLSSLDLRSNELHALTYDNIKPILDNLKPQNSNLLLEDNSFVCNCNLKWMHALRNETKSQNTKDSLENVTCRLDPPIVSSAYNKIPETDNAPFNQEILHAGLTIETLNEKMNITEKKGDLKDIVEAANEIQTKKGVKRNVLKFPPETLPCPREVVKTTEAPTFIIDPVIPIQNEMKTYRYHEMNSGHGLSLRFSIVLYNICLAFFFT

Uniprot

H9JGC9   A0A2A4IZZ4   A0A2H1WWK7   A0A3S2P0I5   A0A212EY84   A0A194RI80   + More
A0A194QGJ2   A0A0L7KSB1   A0A0L7LCW6   A0A2H1X0G1   A0A3S2NQN6   A0A194QMB6   A0A2H1VKA7   A0A0L7LJM4   A0A2Z5U6Q8   A0A194RMP0   A0A212EWB6   H9JGE2   A0A194RIU1   A0A194QI49   A0A2A4JHU6   A0A2H1WRJ5   D1ZZZ7   A0A2A4JNA6   A0A3S2LY46   A0A0L7LT00   A0A0L7LRI8   A0A212FJY7   A0A194QGQ1   A0A194RI53   H9JGE5   A0A1Y1MUS6   A0A1Y1MUR2   A0A2P9A985   A0A1B6EUX6   A0A212F0E9   A0A1B6IKB2   A0A194QGR0   A0A194RII6   A0A3S2NX82   A0A336LLJ4   E9I8W9   A0A0A9X110   A0A084VHE4   A0A182QPK5   A0A182UQE2   A0A084VHF5   A0A182IMQ6   A0A182XBB6   A0A182U569   Q7PYM2   A0A182KLR3   A0A182I059   A0A182KLR6   A0A182JL45   A0A182MKY2   A0A182VZ11   A0A182QL42   Q7PYM1   A0A182I060   A0A182VJ73   A0A182R6D0   A0A182NCF0   A0A1J1IJF1   A0A182M1F9   A0A182XBB7   A0A182NCE9   A0A182UD95   A0A1B6CMN5   A0A2P8YXU8   A0A182VZ10   B0X9P1   A0A182RWX6   A0A182PKK5   A0A195F1M2   A0A195C8C6   A0A182XVW5   A0A154PP99   A0A195BFM6   A0A195EJP1   W5JPC6   A0A182K4I7   A0A182FKT3   A0A1J1II28   A0A088AP31   Q16QN1   A0A182HFA7   A0A0P6IPK7  

Pubmed

19121390    22118469    26354079    26227816    18362917    19820115    + More
28004739    21282665    25401762    24438588    12364791    14747013    17210077    20966253    29403074    25244985    20920257    23761445    17510324    26483478   

EMBL

BABH01033645    NWSH01004345    PCG65199.1    ODYU01011209    SOQ56804.1    RSAL01000068    + More
RVE49260.1    AGBW02011598    OWR46445.1    KQ460154    KPJ17267.1    KQ458880    KPJ04617.1    JTDY01006497    KOB65961.1    JTDY01001654    KOB73240.1    ODYU01012486    SOQ58819.1    RSAL01000372    RVE42134.1    KPJ04616.1    ODYU01002867    SOQ40882.1    JTDY01000864    KOB75625.1    AP017473    BBB06699.1    KPJ17266.1    AGBW02012044    OWR45761.1    BABH01033551    KPJ17255.1    KPJ04605.1    NWSH01001336    PCG71627.1    ODYU01010456    SOQ55582.1    KQ971338    EFA02447.2    NWSH01001048    PCG72923.1    RSAL01000117    RVE46822.1    JTDY01000194    KOB78356.1    JTDY01000246    KOB78072.1    AGBW02008193    OWR54044.1    KPJ04594.1    KPJ17242.1    BABH01033535    GEZM01020065    GEZM01020063    JAV89424.1    GEZM01020064    JAV89423.1    LT717637    SIW61629.1    GECZ01028051    GECZ01022424    GECZ01015237    GECZ01002416    JAS41718.1    JAS47345.1    JAS54532.1    JAS67353.1    AGBW02011096    OWR47219.1    GECU01020353    JAS87353.1    KPJ04604.1    KPJ17254.1    RSAL01000035    RVE51318.1    UFQT01000045    SSX18826.1    GL761662    EFZ22980.1    GBHO01029960    JAG13644.1    ATLV01013162    KE524842    KFB37388.1    AXCN02000020    ATLV01013171    KFB37399.1    AAAB01008987    EAA01440.5    APCN01002046    AXCM01006762    AXCN02000019    EAA01419.5    APCN01002047    CVRI01000049    CRK99190.1    AXCM01004687    GEDC01022564    GEDC01019421    GEDC01017721    JAS14734.1    JAS17877.1    JAS19577.1    PYGN01000295    PSN49068.1    DS232543    EDS43243.1    KQ981856    KYN34475.1    KQ978081    KYM97087.1    KQ435007    KZC13567.1    KQ976490    KYM83385.1    KQ978782    KYN28470.1    ADMH02000940    ETN64619.1    CRK99188.1    CH477742    EAT36704.1    JXUM01036703    JXUM01036704    JXUM01036705    KQ561103    KXJ79693.1    GDIQ01002277    JAN92460.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000007266    UP000030765    UP000075886    UP000075903    UP000075880    UP000076407    UP000075902    UP000007062    UP000075882    UP000075840    UP000075883    UP000075920    UP000075900    UP000075884    UP000183832    UP000245037    UP000002320    UP000075885    UP000078541    UP000078542    UP000076408    UP000076502    UP000078540    UP000078492    UP000000673    UP000075881    UP000069272    UP000005203    UP000008820    UP000069940    UP000249989   

PRIDE

H9JGC9    H9JGE2    H9JGE5   

Pfam

PF13855   LRR_8        + More
PF13306   LRR_5
PF00560   LRR_1

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JGC9   A0A2A4IZZ4   A0A2H1WWK7   A0A3S2P0I5   A0A212EY84   A0A194RI80   + More
A0A194QGJ2   A0A0L7KSB1   A0A0L7LCW6   A0A2H1X0G1   A0A3S2NQN6   A0A194QMB6   A0A2H1VKA7   A0A0L7LJM4   A0A2Z5U6Q8   A0A194RMP0   A0A212EWB6   H9JGE2   A0A194RIU1   A0A194QI49   A0A2A4JHU6   A0A2H1WRJ5   D1ZZZ7   A0A2A4JNA6   A0A3S2LY46   A0A0L7LT00   A0A0L7LRI8   A0A212FJY7   A0A194QGQ1   A0A194RI53   H9JGE5   A0A1Y1MUS6   A0A1Y1MUR2   A0A2P9A985   A0A1B6EUX6   A0A212F0E9   A0A1B6IKB2   A0A194QGR0   A0A194RII6   A0A3S2NX82   A0A336LLJ4   E9I8W9   A0A0A9X110   A0A084VHE4   A0A182QPK5   A0A182UQE2   A0A084VHF5   A0A182IMQ6   A0A182XBB6   A0A182U569   Q7PYM2   A0A182KLR3   A0A182I059   A0A182KLR6   A0A182JL45   A0A182MKY2   A0A182VZ11   A0A182QL42   Q7PYM1   A0A182I060   A0A182VJ73   A0A182R6D0   A0A182NCF0   A0A1J1IJF1   A0A182M1F9   A0A182XBB7   A0A182NCE9   A0A182UD95   A0A1B6CMN5   A0A2P8YXU8   A0A182VZ10   B0X9P1   A0A182RWX6   A0A182PKK5   A0A195F1M2   A0A195C8C6   A0A182XVW5   A0A154PP99   A0A195BFM6   A0A195EJP1   W5JPC6   A0A182K4I7   A0A182FKT3   A0A1J1II28   A0A088AP31   Q16QN1   A0A182HFA7   A0A0P6IPK7  

PDB

5A5C     E-value=6.74699e-24,     Score=275

KEGG

105841549    no KO assigned | (RefSeq) connectin-like

GO

GO:0016021   GO:0005515   GO:0015074   GO:0007165   GO:0006106   GO:0045239   GO:0003824   GO:0006811   GO:0005622   GO:0006810  

SignalP

Position:   1 - 27,         Likelihood:  0.908848

 

 

Length:

521

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.0448

Exp number, first 60 AAs:

15.83716

Total prob of N-in:

0.68992

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  521

 

 

Pi

232.54999

Theta

207.283787

Tajima's D

0.171111

CLR

0.028965

CSRT

0.416229188540573

Interpretation

Uncertain