SGID The Silkworm Genome Information Database
Gene
KWMTBOMO11134
Pre Gene Modal
BGIBMGA008575
Annotation
PREDICTED:_uncharacterized_protein_LOC101738605_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.514
 

Sequence

CDS
ATGTATTCCAGGTCTACAAGCTACAAAGCTGCGGACATAACGAGTGAAGATTCATCGACGGCTGTACCTAATGCACCTAAAGTTCTCAAATCCAAGGAACCGATTGGAGATGCCCTTCAAGAACTAGCCAGCCAACTGCTCGAGAAAACCGAGAACACGTCCGAGCAAGTAATCGCTGAAAGCAGAGTATCCACAAAACTAAAGTTTCCAAATCAAAAACACAAAACAATACAAAACGAAGACGATGCTTTGTATAATGGGCATGCAGGAGAGGCAGTTCCCATCACAATCGAAGATCTTGAAACTGAGAATGCCAGTGATGTGATCAATGACTCTGCTACTACCAAGGAAGGTATATCTACTTGGGTCTTAGTGAGTAGTCCCACGAATGTGTCTTCAGTATCCACGGAACCTACGAAAACGGATGAAGTGAAGAAGTCGAAGCCAACAGGAAATAAAAATAAAAAACGACCTTCGAACAAGAATCAGGCTAAACGTCCAATTATAGCGAGCAGTAACAAAGCTGATTTGATTGCGGCGGGTTCGGCTATCAATGAAAATGTTTACAATAAAATCAAGGATACAGTGCTGACGAATGTGCAAAAGAACAAAAATGCTAACTCTCAAAGAACTACTACTACCACAACGACCCCGGTTCCAACAGAAACGCCTACAACAACGAAAGAAACAACAAAAGCCCCCGTGACTAAAACTAAAAACAAAAACAAAAATAAACAAAAAACTACCACAACAGAAGCTCCGAGCTACGACGACTCAGCGTTGTTGCCGATGGAGGCCAAAGAATCAGAAATTGAAGTTGAAATCAGTACCCCACCAACAACAACCAAAAAACCTAAACGAAACACAACACGCAAGAAGAATAAAAAACGAAAACCAAGTGCTTCTAAGCCCACAGACGCTACTGGAGTCTCAGATATCAAAGCAAACAACAAAACTAAAACATCCAAACCTACTAAGAAACCCGAAACCGGTGCAATCACTACGCAGCTATACAATTATTTCTCTAGAGAAGTTATGCCGTCCGTGGGTGTTGGAATGATCGGGCTTGCAAGTTTAGTAGGCATAGCAAGCTACTTCTTCTACCCATTCTCTACACCAGTCCGCAGAACTTTCGAGGTTGACAAGAAAGACGACTTGTATAAATACAATGCAGAAGAATACGCAAATGACGGTAATGGCCAACCCGAGGAAGAGATGCTCGGTACTGTATTAGCCGGTATGCCTTCTCATTCAAAATACAAGCTAAACCCTTATGCTGGCCAAACGGCACAAGTAAATCGCTATCCAGTTAAGAAGGAACAAGATTTGAGGCATCGACACGTGGCTGCTTACGATCCTACTAACAACAGATTTCCACAACAGAAAACCGGTATAGCACATGGCGCTGTTTACCCGAAACCCGTAAATTATGGTGTACAGTATGAAACACGACACGTTTACACTACTGAGGGTAAATATAATTATGAAAAAGCTCAGAGCTACACTCCGTATCCGGCAGTCGAGCCAATTTATGCTGCACCTCAAACCGGATCTGGCGTTTCTGGTTACGGCGGCGATACACCCAGTGCAGTAGTATATGGAATCAAGCCTGGCGATGAATCCGATTTCAAACCAGTGTATCCGTTCGACGGACAATTTTACGGTGAGTCGACCAGTAGTCCAGCTACTTACGCTCCAACTTCTATGTATTTAGGCTCCAATAGCGAAACGCAAGATGACAATGCCGATGATTTAAGCGGTAATGAGTCGGATGAAAGCAAATTTGTTGTCGGGAATGTGCCCAAGGAACTAATGGACACAGCTACCCCTGCGGTAGTCCGCGAGCACGGCCCGAGAAAACTGAAAAAGCGTAGCATTTCCACGTCATTGGAAGAGATATTGAGAGCCGAAAAAGATAACAACATATTTATCAGTAATGAAATTGACGATACATACAATCCACCGATCAGAAACCTTGCCTCGCTAGATACGAATGAGATTGGAAAACCTAATGAAGTTATACCGATTTACCCTTTATCTGAACCAATCAAAGAAGACAATAACAAACAAATGATAATTGAAAGCGTATCCACTATTCCCGTTGACAAAGAAAGTACCACGACCGAATCCAATACATCTGAATTCACTACGAAAGCGTTCAAAGTTTACGAGGTGTTTACAACTGATAATCCCGAAAGTCCTAAAGTCGATATCACAACAGAATCCAAGGTTATAGTGACAGAGACCGTCACGGACAGACCTGACACGTCGACTGTACCGTCATCATCATCATCTGTCAGCGTAGATACATCATCTATGCGACCAAAACCGACCGACAGTCCTGACGTCATCACCTACCCACCTCTGAACCAGGGCGGCGGCTTCTTTTCCTTTTTACGAAGGCTCGTTGATTTTAAATACAGATTAGGCTTAAGCATTCTGCAAAACACTTCAGAATCATTGAATAGATATTTGCGTAGTATGGAGGACACTATGGAGAAGGTAGCTAAGGCTTCTAATAAGTAG
Protein
MYSRSTSYKAADITSEDSSTAVPNAPKVLKSKEPIGDALQELASQLLEKTENTSEQVIAESRVSTKLKFPNQKHKTIQNEDDALYNGHAGEAVPITIEDLETENASDVINDSATTKEGISTWVLVSSPTNVSSVSTEPTKTDEVKKSKPTGNKNKKRPSNKNQAKRPIIASSNKADLIAAGSAINENVYNKIKDTVLTNVQKNKNANSQRTTTTTTTPVPTETPTTTKETTKAPVTKTKNKNKNKQKTTTTEAPSYDDSALLPMEAKESEIEVEISTPPTTTKKPKRNTTRKKNKKRKPSASKPTDATGVSDIKANNKTKTSKPTKKPETGAITTQLYNYFSREVMPSVGVGMIGLASLVGIASYFFYPFSTPVRRTFEVDKKDDLYKYNAEEYANDGNGQPEEEMLGTVLAGMPSHSKYKLNPYAGQTAQVNRYPVKKEQDLRHRHVAAYDPTNNRFPQQKTGIAHGAVYPKPVNYGVQYETRHVYTTEGKYNYEKAQSYTPYPAVEPIYAAPQTGSGVSGYGGDTPSAVVYGIKPGDESDFKPVYPFDGQFYGESTSSPATYAPTSMYLGSNSETQDDNADDLSGNESDESKFVVGNVPKELMDTATPAVVREHGPRKLKKRSISTSLEEILRAEKDNNIFISNEIDDTYNPPIRNLASLDTNEIGKPNEVIPIYPLSEPIKEDNNKQMIIESVSTIPVDKESTTTESNTSEFTTKAFKVYEVFTTDNPESPKVDITTESKVIVTETVTDRPDTSTVPSSSSSVSVDTSSMRPKPTDSPDVITYPPLNQGGGFFSFLRRLVDFKYRLGLSILQNTSESLNRYLRSMEDTMEKVAKASNK

Summary

Ontologies

Topology

Length:
841
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.85547
Exp number, first 60 AAs:
0
Total prob of N-in:
0.89449
inside
1  -  347
TMhelix
348  -  370
outside
371  -  841
 
 

Population Genetic Test Statistics

Pi
265.33159
Theta
227.889518
Tajima's D
0.681381
CLR
0.119054
CSRT
0.56347182640868
Interpretation
Uncertain
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