Gene

KWMTBOMO11132  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008239

Annotation

PREDICTED:_acyl-CoA:lysophosphatidylglycerol_acyltransferase_1-like_[Bombyx_mori]

Location

Bomo_Chr18(+):14022962-14025773      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.62 Mitochondrial   Reliability : 1.429 Nuclear   Reliability : 1.331

CDS

ATGTCTAATAATGGTAAAGCGAAGAGAGATCAGTCGCTGGAGGAACTTCGGCAGCATATCCACAAATTCTACATGCCTCTCAGCAGGCAGTTCATGGTGCTCTTTCCGGAAGGTGGATTCTTGCATAAGAGAAGGGAAGTCAGTCAAAGGTTTGCCGAGAAGAATAACTTGCCGAAACTAGAATACGTATCATTACCCCGAGTTGGAGCCATGAAGGTGATCATGGAAGAAATAGGACCAAGGAGGAATGAAGGCGCTGGTACTTCTAAGGACGAATCGCGGAAAGATGACAACTTTAACCAAAGCAAACATAAGATGATAGTGGACAACAATGTGGGCGACACCATCGAATGGATCCTTGATGTGACCATCGCTTACCCTGATCGAATACCCATCCATCTTCAGGATGTCGTATGCGGGACCAGACCACCTTGCACCACACATCTTCATTACAGACTCTATCCTAGTACTGAGGTACCAACAGACACTGAGGGTATGACCCAGTGGCTATACGACAGGTTCATAGAAAAGGAGAAAATGCTGGAGGAGTTCTACAAAACCGGAAAGTTTCCCAGCAAGGGAAACCCGTCGGGATCTGTGGTCAGACAAGTACGGCAGGACAATCTTCGATACCTCATCCTGCATTCGTTCTTCATAGCTTCGACCTTCATCCAATACAAGTTCTTCAGTTTGTTGTTCAGTTATTTTTGGTAA

Protein

MSNNGKAKRDQSLEELRQHIHKFYMPLSRQFMVLFPEGGFLHKRREVSQRFAEKNNLPKLEYVSLPRVGAMKVIMEEIGPRRNEGAGTSKDESRKDDNFNQSKHKMIVDNNVGDTIEWILDVTIAYPDRIPIHLQDVVCGTRPPCTTHLHYRLYPSTEVPTDTEGMTQWLYDRFIEKEKMLEEFYKTGKFPSKGNPSGSVVRQVRQDNLRYLILHSFFIASTFIQYKFFSLLFSYFW

Similarity

Belongs to the synaptobrevin family.

Uniprot

H9JFE2   A0A2H1V948   A0A2A4JWB5   A0A1E1WC35   A0A194RIK2   A0A194QI64   + More
A0A3S2TI19   A0A2M3ZF51   A0A2M3Z8V9   A0A2M4AJ31   A0A2M4AJK0   A0A2J7QFV8   A0A154P1D5   A0A182IRB4   A0A182VWP3   A0A151X0L8   A0A0N0U6V2   A0A195CRJ7   A0A2M4BQV9   A0A088AHM2   A0A2M4BQ02   A0A182FKW0   A0A0L7RIB0   A0A182N524   W5J7H9   B0X1Q7   D2A1V8   A0A2M4BQW0   A0A2M4CQY7   E2BRN3   F4X3K0   A0A2M4BQ05   A0A151I0U3   E9IE77   A0A2M4BQM5   A0A158NLK5   A0A195EYZ9   A0A182Q9S3   A0A1Q3FG36   A0A1Q3FG89   A0A2S2R775   A0A2S2NZX4   K7J9X8   J9JXZ3   A0A2H8TWC7   V5GRN4   A0A026W953   A0A2A3EEU1   A0A1W4X6N7   A0A1B6CCX9   A0A1B6CIT9   A0A1B6C044   A0A1Y1L3E9   E9HFY0   A0A232EY42   A0A1B6EWF5   A0A1B6INK0   A0A1B6HB95   A0A0P5M6A9   A0A146LSW6   A0A0S7GVY4   A0A1L8DYA3   A0A3Q2DQK1   A0A0S7GQU1   A0A1L8DY86   A0A1B6F3B1   W5NHT8   A0A0A9WJ04   A0A0S7GQ62   A0A3B3YE30   A0A2P8XZM5   A0A087YMF2   A0A3B3YE21   A0A3B3V176   M4ASZ4   E0VIN9   A0A3Q2Q163   A0A1W4ZE07   A0A3Q1ITG1   A0A3Q4I0J6   A0A1S3M8A4   A0A147A2T0   A0A3B1IEL1   A0A218V3M4   H0YY57   I3JFG7   A0A3Q3CVJ7   A0A3P8R0K9   A0A3B5AB86   A0A1A8NLX6   A0A1A8M0A5   A0A3P9NN15   A0A1A8GLN2   A0A1A8JCJ6   A0A1A8BEH7   A0A1A8AI30   A0A3Q3B4U6   Q4KMD5   A0A1S3JCE5  

Pubmed

19121390    26354079    20920257    23761445    18362917    19820115    + More
20798317    21719571    21282665    21347285    20075255    24508170    30249741    28004739    21292972    28648823    26823975    25401762    29403074    23542700    20566863    25186727    25329095    20360741    23594743   

EMBL

BABH01041101    ODYU01001313    SOQ37339.1    NWSH01000506    PCG75988.1    GDQN01006514    + More
JAT84540.1    KQ460154    KPJ17269.1    KQ458880    KPJ04620.1    RSAL01000124    RVE46604.1    GGFM01006360    MBW27111.1    GGFM01004184    MBW24935.1    GGFK01007474    MBW40795.1    GGFK01007487    MBW40808.1    NEVH01014841    PNF27465.1    KQ434786    KZC05048.1    KQ982611    KYQ53897.1    KQ435727    KOX77858.1    KQ977349    KYN03368.1    GGFJ01006309    MBW55450.1    GGFJ01005902    MBW55043.1    KQ414584    KOC70569.1    ADMH02002026    ETN59916.1    DS232267    EDS38785.1    KQ971338    EFA02132.1    GGFJ01006308    MBW55449.1    GGFL01003413    MBW67591.1    GL449978    EFN81627.1    GL888616    EGI58973.1    GGFJ01006009    MBW55150.1    KQ976605    KYM79356.1    GL762562    EFZ21122.1    GGFJ01006229    MBW55370.1    ADTU01019621    KQ981914    KYN33132.1    AXCN02000175    GFDL01008527    JAV26518.1    GFDL01008482    JAV26563.1    GGMS01016347    MBY85550.1    GGMR01009993    MBY22612.1    AAZX01002316    ABLF02011377    ABLF02011378    GFXV01006414    MBW18219.1    GALX01001632    JAB66834.1    KK107378    QOIP01000012    EZA51564.1    RLU16131.1    KZ288282    PBC29531.1    GEDC01026010    JAS11288.1    GEDC01031155    GEDC01029108    GEDC01023968    JAS06143.1    JAS08190.1    JAS13330.1    GEDC01030417    JAS06881.1    GEZM01067916    GEZM01067915    JAV67328.1    GL732638    EFX69294.1    NNAY01001679    OXU23243.1    GECZ01027453    GECZ01017163    JAS42316.1    JAS52606.1    GECU01019229    GECU01014441    JAS88477.1    JAS93265.1    GECU01035786    GECU01030695    GECU01030339    GECU01028093    JAS71920.1    JAS77011.1    JAS77367.1    JAS79613.1    GDIQ01171866    GDIP01088754    LRGB01003375    JAK79859.1    JAM14961.1    KZS02990.1    GDHC01008813    JAQ09816.1    GBYX01450235    JAO31257.1    GFDF01002695    JAV11389.1    GBYX01450237    JAO31255.1    GFDF01002673    JAV11411.1    GECZ01025091    GECZ01015436    JAS44678.1    JAS54333.1    AHAT01015685    GBHO01043605    GBHO01035840    GBHO01035812    GBRD01004369    GBRD01004368    GBRD01004367    JAF99998.1    JAG07764.1    JAG07792.1    JAG61452.1    GBYX01450241    GBYX01450239    JAO31253.1    PYGN01001118    PSN37462.1    AYCK01000259    AYCK01000260    DS235201    EEB13245.1    GCES01013756    JAR72567.1    MUZQ01000055    OWK60665.1    ABQF01123287    ABQF01123288    AERX01015270    HAEI01000008    HAEH01014640    SBR69767.1    HAEF01010075    HAEG01009494    SBR49704.1    HAEB01012352    HAEC01003854    SBQ71931.1    HAED01020018    HAEE01012572    SBR06530.1    HADZ01001100    HAEA01016881    SBP65041.1    HADY01016229    HAEJ01016059    SBP54714.1    BX248403    BC098616    AAH98616.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000235965    + More
UP000076502    UP000075880    UP000075920    UP000075809    UP000053105    UP000078542    UP000005203    UP000069272    UP000053825    UP000075884    UP000000673    UP000002320    UP000007266    UP000008237    UP000007755    UP000078540    UP000005205    UP000078541    UP000075886    UP000002358    UP000007819    UP000053097    UP000279307    UP000242457    UP000192223    UP000000305    UP000215335    UP000076858    UP000265020    UP000018468    UP000261480    UP000245037    UP000028760    UP000261500    UP000002852    UP000009046    UP000265000    UP000192224    UP000265040    UP000261580    UP000087266    UP000018467    UP000197619    UP000007754    UP000005207    UP000264840    UP000265100    UP000261400    UP000242638    UP000264800    UP000000437    UP000085678   

PRIDE

H9JFE2   

Pfam

PF16076   Acyltransf_C        + More
PF08337   Plexin_cytopl
PF18020   TIG_2
PF17960   TIG_plexin
PF01553   Acyltransferase
PF01403   Sema
PF01833   TIG
PF01437   PSI
PF00583   Acetyltransf_1
PF13774   Longin
PF00957   Synaptobrevin

Interpro

IPR032098   Acyltransf_C        + More
IPR002165   Plexin_repeat       
IPR014756   Ig_E-set       
IPR002909   IPT_dom       
IPR001627   Semap_dom       
IPR031148   Plexin       
IPR041362   TIG2_plexin       
IPR002123   Plipid/glycerol_acylTrfase       
IPR013783   Ig-like_fold       
IPR041019   TIG1_plexin       
IPR013548   Plexin_cytoplasmic_RasGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR016201   PSI       
IPR036352   Semap_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR016181   Acyl_CoA_acyltransferase       
IPR000182   GNAT_dom       
IPR010908   Longin_dom       
IPR001388   Synaptobrevin       
IPR011012   Longin-like_dom_sf       

SUPFAM

SSF81296   SSF81296        + More
SSF101912   SSF101912       
SSF48350   SSF48350       
SSF55729   SSF55729       
SSF64356   SSF64356       

Gene 3D

2.130.10.10     2.60.40.10    

ProteinModelPortal

H9JFE2   A0A2H1V948   A0A2A4JWB5   A0A1E1WC35   A0A194RIK2   A0A194QI64   + More
A0A3S2TI19   A0A2M3ZF51   A0A2M3Z8V9   A0A2M4AJ31   A0A2M4AJK0   A0A2J7QFV8   A0A154P1D5   A0A182IRB4   A0A182VWP3   A0A151X0L8   A0A0N0U6V2   A0A195CRJ7   A0A2M4BQV9   A0A088AHM2   A0A2M4BQ02   A0A182FKW0   A0A0L7RIB0   A0A182N524   W5J7H9   B0X1Q7   D2A1V8   A0A2M4BQW0   A0A2M4CQY7   E2BRN3   F4X3K0   A0A2M4BQ05   A0A151I0U3   E9IE77   A0A2M4BQM5   A0A158NLK5   A0A195EYZ9   A0A182Q9S3   A0A1Q3FG36   A0A1Q3FG89   A0A2S2R775   A0A2S2NZX4   K7J9X8   J9JXZ3   A0A2H8TWC7   V5GRN4   A0A026W953   A0A2A3EEU1   A0A1W4X6N7   A0A1B6CCX9   A0A1B6CIT9   A0A1B6C044   A0A1Y1L3E9   E9HFY0   A0A232EY42   A0A1B6EWF5   A0A1B6INK0   A0A1B6HB95   A0A0P5M6A9   A0A146LSW6   A0A0S7GVY4   A0A1L8DYA3   A0A3Q2DQK1   A0A0S7GQU1   A0A1L8DY86   A0A1B6F3B1   W5NHT8   A0A0A9WJ04   A0A0S7GQ62   A0A3B3YE30   A0A2P8XZM5   A0A087YMF2   A0A3B3YE21   A0A3B3V176   M4ASZ4   E0VIN9   A0A3Q2Q163   A0A1W4ZE07   A0A3Q1ITG1   A0A3Q4I0J6   A0A1S3M8A4   A0A147A2T0   A0A3B1IEL1   A0A218V3M4   H0YY57   I3JFG7   A0A3Q3CVJ7   A0A3P8R0K9   A0A3B5AB86   A0A1A8NLX6   A0A1A8M0A5   A0A3P9NN15   A0A1A8GLN2   A0A1A8JCJ6   A0A1A8BEH7   A0A1A8AI30   A0A3Q3B4U6   Q4KMD5   A0A1S3JCE5  

KEGG

101741576    K13514 lysophosphatidylglycerol acyltransferase 1 [EC:2.3.1.-] | (RefSeq) acyl-CoA:lysophosphatidylg

PATHWAY

00564    Glycerophospholipid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0016746   GO:0003841   GO:0006644   GO:0016192   GO:0045723   GO:0005737  

PANTHER

PTHR22625  

Length:

237

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.2528

Exp number, first 60 AAs:

0.01631

Total prob of N-in:

0.97410

inside

1  -  210

TMhelix

211  -  233

outside

234  -  237

 

 

Pi

296.806628

Theta

206.012908

Tajima's D

1.464157

CLR

0.74614

CSRT

0.781060946952652

Interpretation

Uncertain