SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11124
Pre Gene Modal
BGIBMGA008235
Annotation
PREDICTED:_neuroglobin-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.6
 

Sequence

CDS
ATGAGACTATTCGAAGAGAACGAAGACCTACTGCATCTATTCGAGAAATTCCAAGAACTTCGGACCACGGAGGATCTCTCTCAATCCGAAGAGCTAGCGGAGCACGCCAACAAAGTGATGCACACCCTGGATGAGGGGATCAAGGGCTTAGGAGATATTGACACATTCTTGGCGTACATACAGCATGTAGGTGCCACTCATCACCAAGTCCCTGGATTTAAGGCAGAGAACTTCTGGAAAATCGAGCAGCCCTTCCTTCAAGCGGCCAAAACAACTCTTGGCGAGAGGTACACGGCAAACGTAGAGAACATTTACAAGCTCACGATCAAATTCATCCTTGAGAATCTAGTGAAAGGATACGAGGACTCGGCCGGGAAAGAAATCGGGAACAACGAGACCACGTAG
Protein
MRLFEENEDLLHLFEKFQELRTTEDLSQSEELAEHANKVMHTLDEGIKGLGDIDTFLAYIQHVGATHHQVPGFKAENFWKIEQPFLQAAKTTLGERYTANVENIYKLTIKFILENLVKGYEDSAGKEIGNNETT

Summary

Similarity
Belongs to the globin family.
Belongs to the membrane-bound acyltransferase family.
EMBL
BABH01038324    ODYU01005094    SOQ45629.1    AGBW02009406    OWR50897.1    KQ458880    + More
KPJ04626.1    KQ460154    KPJ17275.1    NWSH01002184    PCG68952.1    KPJ17276.1    KPJ04627.1    AAAB01008986    EAL38715.2    AXCN02001045    APCN01003286    GDQN01003330    JAT87724.1    BABH01038320    BABH01038321    OWR50896.1    KB632375    ERL93989.1    GGFK01011403    MBW44724.1    GGFM01004130    MBW24881.1    GGFJ01009366    MBW58507.1    GGFJ01009172    MBW58313.1    ADMH02000662    ETN65407.1    GGFM01003749    MBW24500.1    GGFM01007336    MBW28087.1    AXCM01013038    RSAL01000001    RVE55232.1    ATLV01023900    KE525347    KFB49844.1    KK852804    KDR16228.1    KQ971338    EFA01942.2    UFQS01000691    UFQT01000691    SSX06245.1    SSX26599.1    CH477292    EAT44522.1    PYGN01000048    PSN56257.1    GBHO01028414    JAG15190.1    GDHC01007895    JAQ10734.1    NEVH01006564    PNF37993.1    GFDF01010670    JAV03414.1    LJIG01002915    KRT84025.1    CVRI01000064    CRL05080.1    ODYU01005271    SOQ45956.1    ABLF02022290    ABLF02022292    ABLF02058838    GEBQ01022030    JAT17947.1    GBGD01003487    JAC85402.1    GECU01028032    JAS79674.1    GGMR01008599    MBY21218.1    GECZ01030849    JAS38920.1    GEDC01004617    JAS32681.1    GBBI01002469    JAC16243.1    GL448571    EFN84118.1    GFTR01003112    JAW13314.1    GBYB01008740    JAG78507.1    QOIP01000013    RLU15425.1    GFXV01002366    MBW14171.1    GDRN01067978    JAI64272.1    ADTU01022881    ADTU01022882    GEZM01070823    GEZM01070822    JAV66267.1    LNIX01000002    OXA60756.1    GDRN01067981    JAI64271.1    KQ976464    KYM84462.1    KQ980934    KYN11311.1    KQ977279    KYN04298.1    GL732525    EFX88598.1    KX839669    ASN74469.1    ABJB010671488    DS666390    EEC03337.1    GEFH01001284    JAP67297.1    KP299997    KP299998    AJO70031.1    AJO70032.1    GFAC01007335    JAT91853.1    KP299991    AJO70025.1    GGLE01003447    MBY07573.1    DS235271    EEB14201.1    LRGB01002849    KZS06152.1    IACF01006508    LAB72091.1    KQ982182    KYQ59259.1    GDIQ01016517    JAN78220.1    GDIP01022327    JAM81388.1    GL443346    EFN62168.1    KQ981382    KYN42104.1    KZ288358    PBC27039.1    JR039567    JR039568    AEY58756.1    AEY58757.1    KK112108    KFM56743.1    KK107264    EZA53845.1    GL888332    EGI62594.1    JTDY01003332    KOB69711.1    KQ435692    KOX81120.1    GL762722    EFZ20891.1    KB202990    ESO86862.1    JXLN01010456    KPM05752.1   
Pfam
PF00042   Globin        + More
PF03062   MBOAT
Interpro
IPR012292   Globin/Proto        + More
IPR009050   Globin-like_sf       
IPR000971   Globin       
IPR004299   MBOAT_fam       
SUPFAM
SSF46458   SSF46458       
Gene 3D
PDB
5ZM9     E-value=8.34539e-13,     Score=171

Ontologies

Topology

Length:
134
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.07015
outside
1  -  134
 
 

Population Genetic Test Statistics

Pi
193.514342
Theta
157.03721
Tajima's D
0.735096
CLR
1.215313
CSRT
0.592170391480426
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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