SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11122  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008234
Annotation
PREDICTED:_neuroglobin-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.635
 

Sequence

CDS
ATGGGTTGTCAGCTCGGTAAATTGGCAGCGTCTGAGCGTCGTGGGAACAACGCCGGACCTGTCACCGATGGTCCCCCACCAGCCACGGATCCTCGGCTGCCTCTCACGGCAAAACAGAAGTACTCAATGCTGGCCTCGTGGAAAGGAATCTCCAGAGCAATGGAGAAGACCGGCATATGTATGTTTATAAAGTTATTCGAAGAGAACCAAGATCTACTGGACATGTTCGAGAAATTTCGCCAGTGCAAGACGAAAGAGGAGCAGATAAACTCCATGGAGCTCGCGGAGCACGCCAACAACGTAATGAACACCCTGGACGAGGGGATCAAGGGTTTGGACGATTTGGACAATTTCTTCCAGTACATACACCAAGTTGGAGCTAGCCATAGAAAAATACCTGGGTTCAGAGTGGAATATTTTTGGAAAATCGAAGCGCCTTTCCTTGCGGCCGTCGAGTCGACGCTGGGCGACCGATACACGCCAAACGTCGAAAATATTTACAAAATAACAATTAAATTCATATTGGAAACCCTCATCGAAGGCTACGAGAAGGCTGGTAACAACCCGAGCTCAGCGTCGTGA
Protein
MGCQLGKLAASERRGNNAGPVTDGPPPATDPRLPLTAKQKYSMLASWKGISRAMEKTGICMFIKLFEENQDLLDMFEKFRQCKTKEEQINSMELAEHANNVMNTLDEGIKGLDDLDNFFQYIHQVGASHRKIPGFRVEYFWKIEAPFLAAVESTLGDRYTPNVENIYKITIKFILETLIEGYEKAGNNPSSAS

Summary

Similarity
Belongs to the globin family.
Belongs to the membrane-bound acyltransferase family.
EMBL
KQ458880    KPJ04627.1    RSAL01000001    RVE55232.1    GDQN01003330    JAT87724.1    + More
NWSH01007763    PCG62814.1    GFDF01010670    JAV03414.1    ADMH02000662    ETN65407.1    GGFK01011403    MBW44724.1    GGFM01004130    MBW24881.1    GGFJ01009172    MBW58313.1    GGFM01003749    MBW24500.1    GGFJ01009366    MBW58507.1    GGFM01007336    MBW28087.1    AAAB01008986    APCN01003286    AXCN02001045    GBYB01008740    JAG78507.1    GECZ01030849    JAS38920.1    ADTU01022881    ADTU01022882    GEZM01070823    GEZM01070822    JAV66267.1    ATLV01023900    KE525347    KFB49844.1    CVRI01000064    CRL05080.1    GDHC01007895    JAQ10734.1    UFQS01000691    UFQT01000691    SSX06245.1    SSX26599.1    GFXV01002366    MBW14171.1    GBHO01028414    JAG15190.1    GGMR01008599    MBY21218.1    QOIP01000013    RLU15425.1    GEDC01004617    JAS32681.1    KPJ04626.1    KQ460154    KPJ17275.1    KPJ17276.1    GFTR01003112    JAW13314.1    GBBI01002469    JAC16243.1    GEBQ01022030    JAT17947.1    KP299991    AJO70025.1    KP299997    KP299998    AJO70031.1    AJO70032.1    LRGB01002849    KZS06152.1    AGBW02009406    OWR50897.1    KZ288358    PBC27039.1    JR039567    JR039568    AEY58756.1    AEY58757.1    GDIP01022327    JAM81388.1    LNIX01000002    OXA60756.1    ABJB010671488    DS666390    EEC03337.1    GGLE01003447    MBY07573.1    GDRN01067981    JAI64271.1    KX839669    ASN74469.1    GDIQ01016517    JAN78220.1    GEFH01001284    JAP67297.1    IACF01006508    LAB72091.1    JXLN01010456    KPM05752.1    KK112108    KFM56743.1    PYGN01000048    PSN56257.1    KQ981382    KYN42104.1    KK118090    KFM72217.1    GL762722    EFZ20891.1   
Pfam
PF00042   Globin        + More
PF03062   MBOAT
Interpro
IPR012292   Globin/Proto        + More
IPR009050   Globin-like_sf       
IPR000971   Globin       
IPR004299   MBOAT_fam       
IPR002335   Myoglobin       
SUPFAM
SSF46458   SSF46458       
Gene 3D
PDB
5ZM9     E-value=1.71946e-26,     Score=292

Ontologies

Topology

Length:
193
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00118
Exp number, first 60 AAs:
0.00029
Total prob of N-in:
0.05009
outside
1  -  193
 
 

Population Genetic Test Statistics

Pi
219.864289
Theta
176.919826
Tajima's D
1.58197
CLR
0.096299
CSRT
0.806509674516274
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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