SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11117
Pre Gene Modal
BGIBMGA008219
Annotation
PREDICTED:_uncharacterized_protein_LOC101744177_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.622
 

Sequence

CDS
ATGCCCCCAGCACCGGAGGCGGCGCTGCCTGGAGTCCCAGCGCCTCCCGGACCTGCCGCCCTGCACACACACTCCGCAAAATTTCCTATAGAACGAGAAGTGATCTTATCTTCAGGAGAAAAGAATTCCAAAGTGCCAATACTTCAAGAGGCTCGAAAACGCGGCAGACTCGGCGCCGTGGCTCCCGACACCCCACCAAAAACACTCTCAGCCTGGACTCACTCGGAGAACCAAGCCGGCACATCGGCCGACTACAGACAATACCACGAGAACTACAATTACAACATGCAGCAGAATCAGAGTGGTACTAGAAATGGCAACTACGATTCTCCCAAACCACCAGTGCCCGCCAAAACATACGGCACCAAAATTGACGCCACGAATAATTCACAACAGATTACGGTTACCGTAGAGACAGGCAAAGATAGCACAAGAGACGCACCGAGAAGTAACAAATCCGTTAGTAAAACGTATCATACACTAAAAGACATGATTTCTAGTAGATTTAAAAGTAAGGACGGGAGTGAAGATAAAGCAGAAGAATCCAATTTAAACAACAGTGAAGAGAGAAAACGGCCTGAGCCTGAACCGATAACGCCGAGAGATACTGGTCCCAGGAAAGTGGAGCAAGGTATATACGGACGACCAGTTCCGCAAAACAGGCCGGAGGTGCAATACAGTCATGGAGTGGCTAATAATATGGCGTATCCAAGTCCATCGCCGCATAGGCAACTAATGCAACAGCAAATCGTCCAACAAAAGATGCTACTGAACCACCAAGCCAGATCGCAGGAGATGTTGGCGTCGCCCCATCGACCCCAACCTCAGGCGCTTGGTTCCGACGCCCTATACCAGCAGTACGGACCTCCGGGACGAAGAAGCGCGGTGTACCAACGGGACATGGACGTGAGGTCTATGGCCAATTTCACATCCTTGAAAACTAGTCCACAAACACAGTTCGAATCGCATTCAAGACCAGATCTTCGAAGTCCACAGCAATTAGAACGAGAGATCATCCGGCAACGAGGATTAGTCGAAGGCAGACGGGCAGCATCACATCCTCATCTACTAGATGAACCGCAATCAAGACCTGAAGCATCCACTCCATACAGTCATGACAGATCCAGGCGGAACTCTCACGCTAACCTTCTAGAAGCAACTGAAGAAAACCTTCACAGAAACGATGAAAGAGAATCGGATGATGGAGGGTTCAGAGCTAGATTAGCTGCACAAGGGAGGTCAAGTTTCGAAGATAGAATCAGGACGAGTGGTAGATCTATAGAATCTCAGCGAATACACGAAAATGTATACAGAAGAACGCCTGACAGCCATAATCGTAGGACGCCGGATTCAGTGGGACCAAAACGCGAAGATACTTTAACGACGGGACAGGCGGCAAACGATGAGAATGCAAGCCAAAAGTCCGCAGACAGCGTTTACCATTCTAGTGGGAAAACTGAAGCATACAATCCGCAGCCCTCCTCGTCACGGCAAACCCCGAATAGAATAGAAGATTTGAAAGCTACCGGGAAGAAAGGGGCAGGATCTGGTGCCAGTTCAGACTACGACAAGAACGGCGGTCAGTCGTCGAATGTGGACTCCGGGCGAGGTAGCGTAGCCTACTCCAGCGGGAGACGACCAGAAGCCAGTATACATGACACCTCGGCTGATTCCGATGCGGTCGGATCGAGAGTTCAGCCCCAACCTGGACCAAGCCAGGAAACCGCTGCACAAAGCGTAGAAAACGAATGGGCCGATTTAGTGGAATGCGAGCTCCGTCAGATCTTAGAACCGAAACTATCCAGCATGAGGCTTGACTCGTCAGGAAGCTCGGATAGTTCAGTGACCCCGCCCCTCCCACCGTTATCACCTTCTTCAGACATGCACAAGAGAAATAGTCTACCAGGTCGTTCCTCAGAGTACCCTGATGAGAGGAGACGAGGTAGAGAATCGCCACGGTGGCATTCACACAAGAAGCATTCTTCGAAACGCGATCATCATTATAAAAAACATTGTGAGTTGTAA
Protein
MPPAPEAALPGVPAPPGPAALHTHSAKFPIEREVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKIDATNNSQQITVTVETGKDSTRDAPRSNKSVSKTYHTLKDMISSRFKSKDGSEDKAEESNLNNSEERKRPEPEPITPRDTGPRKVEQGIYGRPVPQNRPEVQYSHGVANNMAYPSPSPHRQLMQQQIVQQKMLLNHQARSQEMLASPHRPQPQALGSDALYQQYGPPGRRSAVYQRDMDVRSMANFTSLKTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYSHDRSRRNSHANLLEATEENLHRNDERESDDGGFRARLAAQGRSSFEDRIRTSGRSIESQRIHENVYRRTPDSHNRRTPDSVGPKREDTLTTGQAANDENASQKSADSVYHSSGKTEAYNPQPSSSRQTPNRIEDLKATGKKGAGSGASSDYDKNGGQSSNVDSGRGSVAYSSGRRPEASIHDTSADSDAVGSRVQPQPGPSQETAAQSVENEWADLVECELRQILEPKLSSMRLDSSGSSDSSVTPPLPPLSPSSDMHKRNSLPGRSSEYPDERRRGRESPRWHSHKKHSSKRDHHYKKHCEL

Summary

Pfam
PF00536   SAM_1
Interpro
IPR013761   SAM/pointed_sf        + More
IPR001660   SAM       
IPR001374   R3H_dom       
SUPFAM
SSF47769   SSF47769       
Gene 3D

Ontologies

Topology

Length:
674
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0.00037
Total prob of N-in:
0.00004
outside
1  -  674
 
 

Population Genetic Test Statistics

Pi
216.28886
Theta
161.793849
Tajima's D
0.730023
CLR
10.677675
CSRT
0.584320783960802
Interpretation
Uncertain
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