SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11107
Pre Gene Modal
BGIBMGA008287
Annotation
PREDICTED:_uncharacterized_protein_LOC106139612_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.72
 

Sequence

CDS
ATGACCATGAAACTACACGCGGCCCTGTTGCTAACTACATTCGTGCTCGCCGCACGCGCAGCCTCCATCCCGGACAAGGTCCCCGAGGCCGAAGATAAACCTTTAAATGTCGTTGAGAACTTATCTAGTGAGCAGGAGCTCATCGACCAGGCTAATACGATTAAGGACATCGATAACAGCCTCCGCGCGAACAAAAAAGAAGTCGTCGACATCCCCGTTAAAGTTATCGTTGAAGAAATCAAACCGTCGTTGAAGAGTGATTTAGAAAACGTTGAAGTGCCGGATGAAAATGAGGAAATCAAGAGGCCTCTAGTCGATTTAAGAAATCCCGGGCCCCCGCAGCATCAAGAGCACGAAACACAGAATCCTGAACACCACGAAGATGCTGAAAAAATCGTTTCTTCCGTCAAAAATGACATTAACACAGCGGAAATCGCTCTTCGTCAAGGCTTCCAGGAAGTGTCAGACGGTATTGGAAAATGGTACGCTCGTACCGAGCAAATTAACGAGCTCCAGGCCAGCTTGCAACATTTCCAAGAAAATTTCGGCGCTCAAATACAAAAGTTGAATGAAACGCTACATTTTATTAAACCAGCTGACACCATCGCGGCCCCTTCTGTCGAGGAAACGCAAAATAAAGCTTCTTTTGAAACAATCGAATCGGGTCTCAAGTCTTTAGAGACAAATTTCAATAGCGGTCTTAATCAGCTATCTGAAGGTATTCAAATTGTGGCTACGTTCAAAGCCGACGGAGAGGCTGCAGCTGAAAGTTCCAGTACCGCCCCTGCTCAAAGCACAACAGCTTCTACAGTAACAAGCACCAATGGCCCTACAAATCCTTTAATTCAAATGGTGACCAACCTCCAGAATTCATTCCTGTCCGGAATGGCTAATCTCACTCAAGCAATCAACAACTGGAACTCGAACCAAGCATGGAGTGTTCCAAATATTTTTGGCGGAGCTAGCACTGCAGCCCCTCAGTCAGATGTTCAAGGCGACGCAACCACCACAACGCAGAGACCTGCGCCGTGGCAAAATCTGCCGTCGCAAATAAGCAACTTTTTTAATCCCCAGGGACAAAACAGTAACCAACAAAACCAGAGCGGTCAACAGTCGCAGGCGCCTTCTGGTCTCTTTTCTGGTGTACAAAATTTTCCATTTAACTTCCTAAACCTCTTACAACCAAATAGGCCTGGTGCTCAGTCTACTGAGAAACCCGCTGAAGCGACTAGTACGAACGGAGCCGCGAGTGCCGCTCCAGACATTGCGAAACCATCGGAGTCAAATCTACCTACTGAAACAAAACCAGAACAACCCGCAGCCGGGCCGTTAAAACAAATTTTCGAGAACAGCCCAGTTCTGCAAGGCATCGCAGGAGCAGTTAAAAAGATCCAAACAACAGTCAATAATCCAGTGAAGCCAAGAGATTCGGAAGTGGTTGAAGAGACTAAATCTGATCAAGAGAAGGGAGGCGTCATTTTGTTGCCAGTACACGGTCACGGCGGTCACGGTGGAAATGGTGGGGATAATAACAACGTCAGTGACGGGTTGAAAGCGGAAGCCGAAGAAATCAAGGTATCCACAGAAGAAAAACAGGAAGAGATAAAAGAGAAAGAAATAATAGTAGAAAACAAGACTGAATGA
Protein
MTMKLHAALLLTTFVLAARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEGIQIVATFKADGEAAAESSSTAPAQSTTASTVTSTNGPTNPLIQMVTNLQNSFLSGMANLTQAINNWNSNQAWSVPNIFGGASTAAPQSDVQGDATTTTQRPAPWQNLPSQISNFFNPQGQNSNQQNQSGQQSQAPSGLFSGVQNFPFNFLNLLQPNRPGAQSTEKPAEATSTNGAASAAPDIAKPSESNLPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSDQEKGGVILLPVHGHGGHGGNGGDNNNVSDGLKAEAEEIKVSTEEKQEEIKEKEIIVENKTE

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.986839
 
 
Length:
547
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.60908
Exp number, first 60 AAs:
0.60908
Total prob of N-in:
0.03360
outside
1  -  547
 
 

Population Genetic Test Statistics

Pi
56.824611
Theta
133.965273
Tajima's D
-1.817645
CLR
0.933425
CSRT
0.0261486925653717
Interpretation
Possibly Positive selection
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号