Gene

KWMTBOMO11106  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008288

Annotation

PREDICTED:_thyroid_adenoma-associated_protein_homolog_[Bombyx_mori]

Location

Bomo_Chr18(-):13028977-13043275      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.434 PlasmaMembrane   Reliability : 1.116

CDS

ATGGTTAGTGAATTAAAACAGAAATTCATGAAGTCATCGACTACAGATGAACAACTTAGTGTACTAAAGGAAATATTCGAAACATTAAAATCAGAAATAGACATAGAAACAGTTCATTTTCTTGGGCTAGTATTTTTACAGGCACAACCCAAACATCCAGTAAAATGCTTTCTCTCGAGGCAAATAACAAAACAAACGAAACTACAGCAACCATTTACAGAGACATTAGCAAAAGAAATAATATCTATAACGAGACACGAACATACTGAATATAAAAATTATGAAACCACAGTATTGAGAATATCTACTTGCATTGAAAATTTTCCGGCTGGAGCAAATGCTGTGAAATTGGTTGAGATGCATTTAATAGATTATTTTAATGGATGCTTGCAGTATTGTGTGAAGTCTCTCAGAGAGACTCCGTTATCACCAACAGAAAAGAATGAAATACACAACCTGACTCACTTAGCTCTACGATTATTGCTGCACATTGTACAGAAAACAGATTCAGAATCTGAAATCATCGTAACTAAGTTTAGCACAACAAGATTGTTTATCAAACAATTACTCTTTGACGATGAAGTGCCTATGGACACTAAATCAGTATGTGGAATATTGTTCCTGTCACTACACTGTTTGGAAAATGGACCAGATTCTTGGCTGCAGATAATTCATCCGGTCATATCGGATGTTAACCTCAGTGAGTTGTTAAGTGATGAAGCTTCCCAACTAGCACTATATTCGGCAATAGCTACAGTTGTGAGTCCTGAAGACTTGGAGAAGCAGATTGTAGATAATACACCTGCAATCATACAATTAATTAACAGTGTTTTGCTGATTGGAGAAAGGAGCTCATCAGAATCATCGTTCTCTTTAAGCGTGACTAGAACAGTGTTGCAGATCAGTAAAATGTTAGACAAGATTAATAGTGACGAACTAGGACAAGAAATGATGGAGAGTCTATTTGTGTTCACCTGGTCGCACCTGGAGCATTTCGTGGACAGCGTCAGACACCTGAGCGCACAGATCATGGCGTGCCTCGTTAAATATTCCGTCAGGATGAACAAACAAGGTAACACAAAAGCCCTAGCGAATCTGATCGAAGCCATCAAGTCTGTGGACAGGGACAGAAAGAGTTTCTACCTGTGTCTGACGTCACTCATTGCTGAGCTCGGAGCGGACGGCGTCATGGCCCGACTGAGCGGCGTCATACCCGACACGGTGAACGCTCTCGGCTCGCAGGCGATCCGGGCCAGCGCCACGATAGCATTGGAGAGTCTCCTGCAGAAACACGCGCAGGGGTCGACGACCTGCGACCTGCACGAGCACTGGGTCCGGCCGATATTGAGCTACGCTTCCAACAACGACACGGATTCCGCGATCTTGAATATCCTGGAGGGCCTGCTGGCTAAAGCGATCAAGCTAGATGAGAACCTCATGAATTACATTATACCGTACATCGAGGAGTCTGAAAATTCGAGTAAGGACCTGAAGTGTGTGCTGATGTTGCTGAGCGCGGCGCGGGGCGCGGGGGGCGGGGTGGGGGGCAGCGACCGCTGGAGGGGGGCCGCCCCCTACCCGCTGCTGGAGCGCGCCGCAGTCAGCGCCGCAGACGAGACCCGGATCCTGTCTCTGTCCCTGGTGGTGGAGTCTCCGAAGTCGACGGAACCGTTCACCCCTGAGGAGCTGTCGTTCGTCCTGCACTACCTCAAGTACAACATCAACGCGCAGGCGCCGAGCTTCCGGCAGCTCACCCTATCGGTCATGAAGAAATTCATGAAGCGGCTGGGGGACAGCTACGGCGCGCTGCGGCGACGGCGCCACGCGCTTTGCGCCCACTACGCCGCCTTCCTGCCCGAGCTGACGCAGCTCTGCGGCCGCAGCCTCCTGCCCGGCGCCAACTACAGCCGCCGCTGCGTCGCGCTGCAGATCCTCGTCTGGGCCGACGCCGTGTATCCAGCAGACTGTCCCAGGTCATGGGATCCCGAGTTCGTGGAGAAACTGTTACTACATTTGGACGACAGCTACGAGAGTAACAAAGCAATGGCTCTGAGTATATTAGAGAAGTGTCCTCCAGAGATATTAAAGGACAACAGCTACTCCACAAGTTTGAAACTATCCGACATATTGGCTCAGGCCTCCTCGCCGAAGCCGACGGACTGTGTGTCGGCGGCCTACAAGATGGATCTACTGAGGAAGAAATTACCCGAAAATATAGTTCAAGATGAAACTTTCCGCGGTCCGGAGCCGGTGACGTTCGCGCTGGTGCAGGGCGTGGCGCGGGAGGCGCGGGCGCGGGTGGCGGGGTGCGCGCGCGGGGTGCGGGCGGGGTCGCGGCGGCCCCCCTACGGCGCGCTGCGCTGTCTGCGGCACCTGCTCACCGCGCTCGACCCCCAAGCGATATCGGAGGACGAGAGGTGGCGGTTGTTGATGGGTGACATCATCAACATTTGCTTCGAAGCGAGCGAGGCCGTGGCCTGCGTCGTCAACAACTCATCGCCGGAAGGCCACCTACCGATGGACATGTCGGGGGCCGTGGTGACGGAGCAGGGGGACGGCGGGGGGGCAGCGCCGGGCGGCGGGGGACACGTCACGGCGCAGATGGTGCTACTCTGTGCCTGGAGGTCGGTGAAGGAGGTACGACGCCGCGCGACTGCCCTCTCTACTTGTCTATATTAA

Protein

MVSELKQKFMKSSTTDEQLSVLKEIFETLKSEIDIETVHFLGLVFLQAQPKHPVKCFLSRQITKQTKLQQPFTETLAKEIISITRHEHTEYKNYETTVLRISTCIENFPAGANAVKLVEMHLIDYFNGCLQYCVKSLRETPLSPTEKNEIHNLTHLALRLLLHIVQKTDSESEIIVTKFSTTRLFIKQLLFDDEVPMDTKSVCGILFLSLHCLENGPDSWLQIIHPVISDVNLSELLSDEASQLALYSAIATVVSPEDLEKQIVDNTPAIIQLINSVLLIGERSSSESSFSLSVTRTVLQISKMLDKINSDELGQEMMESLFVFTWSHLEHFVDSVRHLSAQIMACLVKYSVRMNKQGNTKALANLIEAIKSVDRDRKSFYLCLTSLIAELGADGVMARLSGVIPDTVNALGSQAIRASATIALESLLQKHAQGSTTCDLHEHWVRPILSYASNNDTDSAILNILEGLLAKAIKLDENLMNYIIPYIEESENSSKDLKCVLMLLSAARGAGGGVGGSDRWRGAAPYPLLERAAVSAADETRILSLSLVVESPKSTEPFTPEELSFVLHYLKYNINAQAPSFRQLTLSVMKKFMKRLGDSYGALRRRRHALCAHYAAFLPELTQLCGRSLLPGANYSRRCVALQILVWADAVYPADCPRSWDPEFVEKLLLHLDDSYESNKAMALSILEKCPPEILKDNSYSTSLKLSDILAQASSPKPTDCVSAAYKMDLLRKKLPENIVQDETFRGPEPVTFALVQGVAREARARVAGCARGVRAGSRRPPYGALRCLRHLLTALDPQAISEDERWRLLMGDIINICFEASEAVACVVNNSSPEGHLPMDMSGAVVTEQGDGGGAAPGGGGHVTAQMVLLCAWRSVKEVRRRATALSTCLY

Uniprot

H9JFJ1   A0A194QME6   A0A212FKP8   A0A194RIA5   A0A023EX13   A0A2J7RHJ9   + More
A0A1S4G822   A0A182QIG1   A0A1S4H4A3   A0A182VST9   A0A182UMK4   A0A182X1Q8   A0A182PPV8   A0A2M3ZFK8   A0A2M3YYN9   A0A2M3ZFL6   A0A182JPI5   A0A2M3YYP1   A0A2M3YYR8   A0A182MKY3   A0A1S4HE15   A0A1I8M7A3   A0A182J5H1   A0A182RAD5   A0A2M4A3B0   A0A2M4A330   Q16GA7   A0A0P6K145   A0A2P8Z0K4   A0A1B6LYT2   A0A0L0CKK3   A0A084W5K7   A0A1I8Q5H7   A0A0A1XI42   W8C9E8   A0A0T6B5W4   A0A182I0V0   A0A0K8UCX9   A0A0A9ZI34   A0A1A9XAJ0   A0A1B0ATB5   A0A1A9UPI3   A0A1B0G450   A0A182YMZ8   A0A336KPM1   T1J611   A0A2J7RHK8   A0A0K8WJ91   A0A182F487   A0A1B6CZK3   A0A1B6E1K3   B4M2F9   A0A1W4VGU3   A0A210QPQ6   A0A1B6HEQ3   A0A341C346   A0A1Z5L6X5   A0A2Y9NK47   R7TQL0   A0A131YUU5   C3ZLM6   A0A224YLG9   L7M0Q3   A0A2C9L3N9   A0A1W4VTP5   L7MLJ2   X2AWR9  

Pubmed

19121390    26354079    22118469    25474469    17510324    12364791    + More
9087549    25315136    26999592    29403074    26108605    24438588    25830018    24495485    25401762    25244985    17994087    28812685    28528879    23254933    26830274    18563158    28797301    25576852    15562597   

EMBL

BABH01002464    BABH01002465    BABH01002466    KQ458880    KPJ04641.1    AGBW02008030    + More
OWR54269.1    KQ460154    KPJ17292.1    GBBI01004782    JAC13930.1    NEVH01003741    PNF40306.1    AXCN02001866    AAAB01008980    GGFM01006514    MBW27265.1    GGFM01000631    MBW21382.1    GGFM01006524    MBW27275.1    GGFM01000633    MBW21384.1    GGFM01000620    MBW21371.1    AXCM01000592    AAAB01008154    GGFK01001889    MBW35210.1    GGFK01001903    MBW35224.1    CH478301    EAT33275.1    GDUN01000142    JAN95777.1    PYGN01000254    PSN50021.1    GEBQ01011197    JAT28780.1    JRES01000262    KNC32883.1    ATLV01020672    KE525304    KFB45501.1    GBXI01003263    JAD11029.1    GAMC01006711    JAB99844.1    LJIG01009687    KRT82581.1    APCN01005268    GDHF01027787    JAI24527.1    GBHO01044080    GBHO01044062    GBHO01001244    JAF99523.1    JAF99541.1    JAG42360.1    JXJN01003232    CCAG010008295    UFQS01000769    UFQT01000769    SSX06746.1    SSX27091.1    JH431869    PNF40307.1    GDHF01001394    JAI50920.1    GEDC01018399    JAS18899.1    GEDC01005493    JAS31805.1    CH940651    EDW65863.1    NEDP02002489    OWF50726.1    GECU01034482    JAS73224.1    GFJQ02003915    JAW03055.1    KB308994    ELT95832.1    GEDV01005554    JAP83003.1    GG666642    EEN46499.1    GFPF01006649    MAA17795.1    GACK01008370    JAA56664.1    GACK01000901    JAA64133.1    AMQN01011634   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000235965    UP000075886    + More
UP000075920    UP000075903    UP000076407    UP000075885    UP000075881    UP000075883    UP000095301    UP000075880    UP000075900    UP000008820    UP000245037    UP000037069    UP000030765    UP000095300    UP000075840    UP000092443    UP000092460    UP000078200    UP000092444    UP000076408    UP000069272    UP000008792    UP000192221    UP000242188    UP000252040    UP000248483    UP000014760    UP000001554    UP000076420   

PRIDE

H9JFJ1    L7M0Q3    L7MLJ2   

Pfam

PF10350   DUF2428

Interpro

IPR016024   ARM-type_fold        + More
IPR019442   DUF2428_death-receptor-like       
IPR011989   ARM-like       
IPR016137   RGS       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

H9JFJ1   A0A194QME6   A0A212FKP8   A0A194RIA5   A0A023EX13   A0A2J7RHJ9   + More
A0A1S4G822   A0A182QIG1   A0A1S4H4A3   A0A182VST9   A0A182UMK4   A0A182X1Q8   A0A182PPV8   A0A2M3ZFK8   A0A2M3YYN9   A0A2M3ZFL6   A0A182JPI5   A0A2M3YYP1   A0A2M3YYR8   A0A182MKY3   A0A1S4HE15   A0A1I8M7A3   A0A182J5H1   A0A182RAD5   A0A2M4A3B0   A0A2M4A330   Q16GA7   A0A0P6K145   A0A2P8Z0K4   A0A1B6LYT2   A0A0L0CKK3   A0A084W5K7   A0A1I8Q5H7   A0A0A1XI42   W8C9E8   A0A0T6B5W4   A0A182I0V0   A0A0K8UCX9   A0A0A9ZI34   A0A1A9XAJ0   A0A1B0ATB5   A0A1A9UPI3   A0A1B0G450   A0A182YMZ8   A0A336KPM1   T1J611   A0A2J7RHK8   A0A0K8WJ91   A0A182F487   A0A1B6CZK3   A0A1B6E1K3   B4M2F9   A0A1W4VGU3   A0A210QPQ6   A0A1B6HEQ3   A0A341C346   A0A1Z5L6X5   A0A2Y9NK47   R7TQL0   A0A131YUU5   C3ZLM6   A0A224YLG9   L7M0Q3   A0A2C9L3N9   A0A1W4VTP5   L7MLJ2   X2AWR9  

KEGG

101741212    no KO assigned | (RefSeq) thyroid adenoma-associated protein homolog

GO

GO:0016740   GO:0030488   GO:0005829   GO:0005488   GO:0003993   GO:0046872   GO:0046961   GO:0015992   GO:0005524   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

892

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0953

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00043

outside

1  -  892

 

 

Pi

217.329713

Theta

166.268893

Tajima's D

0.927079

CLR

0.27162

CSRT

0.637018149092545

Interpretation

Uncertain