Silkworm Genome Informatics Database

Gene

KWMTBOMO11103 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008290

Annotation

PREDICTED:_uncharacterized_protein_LOC105393415_[Plutella_xylostella]

Location

Bomo_Chr18(-):13003636-13008045 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.467 Nuclear Reliability : 1.698

CDS

ATGAACCGAACCCACGGGACCATTCTGCAGTTGATAACTATATTTGAAACGAAACCAGACAAGTTAGTGAACAGTGAGGCCACTAAAAAATTGTCTGGCTCCTTGACCGCCTCCCTGTGGGTGCTGCGCCAGGCCGTGGGCTCGCCGGCGCCGTGCTACGTGGTCGCGGACGACTACACGAAACTCATCAACAGGATCGTGATGAACTTCCCTTCTCTGTTAGACGACGCAACAGTAACCGCTATAATGGATCTGTTATCGAAATTAATATTCAACAAAAACATATCGAAAATCACATTTGGCCGCGAGGTGTGTCTCGCCAACGCTACGTATTTACACTTTGTTCTACTAAATGTTTTTGAAACACATTTAATAGTAGATTTCGTTTTCAAAACCTTGCAACACCCAGACTACGAAGTGCACATAAGCGTTCTAGACTATATTTTGATACTGCTAAACGATCTGGAAATCGATAATGACTTTCATGAGAATTTATATAAAATCAAGTGTGATGAGACTTTAAACGCTTTGAGACAAAACGAAGGATACAAAGATTTATTGTGTAGGGTTTATGAGAACACTGAATATTTGGAATGCAAGCAAAAGTGTCTTAAGATACTGATTTTAGAGAGGGACACTCAATTGCACATAATTAGGGGAAAAATTAAAGAAAACGTTGAAGTTAACGATAGATTAATTGTCGATGCGCTGATGAAATGCATCCAAGATGAACATGAGAACTTCAGTCATTTGTATATGAAGAGCTTAGTTGATTACGTGACGAAGAATCTCGAGGCGATGTCTTCGGATTTGGTTTTGGATGTCGTCAGAGATTTGTTCTCGTACTGCACCGCAGATAATAGCGACGCCGTCAGAGAAGTTGTCGTTGAATTTATGGAGGGAAACTTCGGGAGATTACTGAAGTCTGATCTGCAAGGATTGGATGAGGCGGAAAAGTTCGAATACCTGGCAACACTCCTTTGTACTGCACTGGTAACATTAGAGGACGACAGCGACACACTGCGACAGAGGACCGCCAACTTGTTGCTTCCCGAGCTGAATGCGCCGTCGAATGTAATGCCGAGCAAATGCGCGGAGATGTTCAGAGATTTCATTGGGAGCTTTAGTGACTGCGTGCCGCTGTACGTCCTGCTCGCTCTGTTGGACTTCAACTCGGAATGTCGAGTTTTCGATCAAAATGAGAGGTACAATATATTCTTGGAAGAAACGATATGGACCAGTGAGTGCGCCGATAGAATCGCGCGGCGGTGCTCGGGGAAGCGCGACGTTCTGAATCATGTTCTCGATATTATCGAGAATCCAGTCTACAAGGGAACATTCGATAAATTAGCTAGCAACAATATCGATTTTTTAAAGAAATCGATAGTAGGGGACTGCTATGGCGACGGAACAGAAATTATAAATCCTAAAATTAAGATCTTTGTAAATAAACTAAAGCATTCTTCAATATAA

Protein

MNRTHGTILQLITIFETKPDKLVNSEATKKLSGSLTASLWVLRQAVGSPAPCYVVADDYTKLINRIVMNFPSLLDDATVTAIMDLLSKLIFNKNISKITFGREVCLANATYLHFVLLNVFETHLIVDFVFKTLQHPDYEVHISVLDYILILLNDLEIDNDFHENLYKIKCDETLNALRQNEGYKDLLCRVYENTEYLECKQKCLKILILERDTQLHIIRGKIKENVEVNDRLIVDALMKCIQDEHENFSHLYMKSLVDYVTKNLEAMSSDLVLDVVRDLFSYCTADNSDAVREVVVEFMEGNFGRLLKSDLQGLDEAEKFEYLATLLCTALVTLEDDSDTLRQRTANLLLPELNAPSNVMPSKCAEMFRDFIGSFSDCVPLYVLLALLDFNSECRVFDQNERYNIFLEETIWTSECADRIARRCSGKRDVLNHVLDIIENPVYKGTFDKLASNNIDFLKKSIVGDCYGDGTEIINPKIKIFVNKLKHSSI

Uniprot

H9JFJ3 A0A2H1V5D5 A0A212FKP8 A0A2A4K1M7 A0A194QME6 A0A3S2NN52 + More
A0A194RHI9

Pubmed

19121390 22118469 26354079

EMBL

BABH01002463 BABH01002464 ODYU01000763 SOQ36038.1 AGBW02008030 OWR54269.1 + More
NWSH01000306 PCG77570.1 KQ458880 KPJ04641.1 RSAL01000028 RVE51906.1 KQ460154 KPJ17293.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000053268 UP000283053 UP000053240 + More

PRIDE

H9JFJ3

Pfam

PF10350 DUF2428

Interpro

IPR016024 ARM-type_fold + More
IPR019442 DUF2428_death-receptor-like

SUPFAM

SSF48371 SSF48371

ProteinModelPortal

H9JFJ3 A0A2H1V5D5 A0A212FKP8 A0A2A4K1M7 A0A194QME6 A0A3S2NN52 + More
A0A194RHI9

KEGG

105842699 no KO assigned | (RefSeq) uncharacterized LOC105842699

GO

GO:0005488 GO:0003993 GO:0046872 GO:0046961 GO:0015992 GO:0005524 GO:0006811 GO:0005622 GO:0006810 GO:0003824

Length:

490

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.07455

Exp number, first 60 AAs:

0.01178

Total prob of N-in:

0.13661

outside

1 - 490

Pi

177.741997

Theta

149.4917

Tajima's D

0.554051

CLR

0.000063

CSRT

0.523573821308935

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics