Gene

KWMTBOMO11101  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008291

Annotation

Mitochondrial_ribosome_recycling_factor_[Operophtera_brumata]

Location

Bomo_Chr18(-):12988515-12989285      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.153 Mitochondrial   Reliability : 1.294 Nuclear   Reliability : 1.654

CDS

ATGGCAGTTCTCTCCGAACTTATACCAGTAGACAAGATGAAAGACCGCTGCAGTGCCGCTATTGAAAACATGAAGGCGGATTTTGCTAAACATTTGTCTATAAGATCAACCACTGGCTCGATAGACACAATACCAGTAAAATTCGAGGGCAAAGAATATGAACTACAAGAACTAGCTCAGATTGTAAGAAAGAATCCTAAAACGATAGTAATAAACTTCTCTTCTTTTCCCCAAGTCATACCGGAGGCCTTGAAAGCCATCAGTAGTTCTGGTCTAAATTTAAATCCACAACAAGATGGAACTACACTGTTTGTGCCTGTGCCTAAAGTCACAAAGGAGCACAGGGAAGCATTGGCTAAGAATGCTAAGGTGTTGTACATAAAGTGTAGGGATGCACTCAAAGACATACAAAATGAAAACATAAAGAAAATGAAGAAACAGACTGGTGTATCTGAAGATTTAATATTTAACGGAACGAAACAAATAAATGCCTTGTGTGAAAAATATCTATTAGAAGCGAGAAGTATTTATGATGCCAAATGTGTTGAATTAGTTGGGAAGTAG

Protein

MAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVLYIKCRDALKDIQNENIKKMKKQTGVSEDLIFNGTKQINALCEKYLLEARSIYDAKCVELVGK

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

Uniprot

H9JFJ4   A0A0L7KP94   A0A194QGH9   A0A194RIY1   A0A2A4K0P3   A0A212FKK7   + More
A0A2H1V5B3   A0A067RE93   A0A182WI37   A0A2J7RCB9   Q16WG4   A0A1S4FLR2   D6WBQ5   A0A182MBM7   A0A182N7G1   A0A182GF64   A0A2P8ZND4   A0A182IWI8   A0A182K0Q2   A0A182TN27   A0A0A1XLF1   A0A182I6D4   Q7QIE2   A0A182V6G6   A0A182L400   A0A182R6P6   A0A0K8V3I3   U5EVR6   A0A1Q3F6V6   A0A034VNS6   A0A1I8P6V6   A0A182X274   B4KX20   A0A0C9QDC5   A0A1I8NBK3   B0WC75   A0A0M4EN57   A0A182SD24   J3JY02   W8CB20   B4LE26   B4IYH5   A0A2M4BZ13   A0A2M4CU16   A0A2M4CU53   A0A2M4BZG8   A0A0K8TL14   T1PIC7   A0A2M4BXQ1   N6T5R9   Q29F88   Q9VSW4   A0A0J9RS36   A0A1A9W4C6   B4PEZ0   B3NCE2   B4MN38   A0A182FFJ5   A0A1W4VP28   B3M6E3   K7J7S1   R4UWU4   A0A1B6IJ35   Q8T0M6   A0A2M3ZJD9   A0A0L0CQD6   A0A1I8P6U0   A0A1A9YIA2   A0A1B6EVL2   A0A0T6BBX2   A0A1B0AVT3   A0A232F347   A0A1A9UGD0   A0A1B6KM94   A0A1W4XSC9   A0A1B0G3B0   A0A1L8DRK8   A0A1I8P717   X1XBB2   A0A1J1IGT5   A0A1Y1NAN7   A0A2S2Q0Y1   J9JR21   A0A1B0GPP0   E2AZY8   A0A2H8TKM8   A0A336MG77   A0A336MRP8   A0A1B6E5S0   A0A1B6EC03   A0A224XWZ4   A0A1S4EL10   A0A146LYX7   E2CA31   A0A151WTR9   E9IKN9   A0A3R7PAG5   A0A1B0CQE4   A0A195D3C3   A0A0P5TU04  

Pubmed

19121390    26227816    26354079    22118469    24845553    17510324    + More
18362917    19820115    26483478    29403074    25830018    12364791    14747013    17210077    20966253    25348373    17994087    25315136    22516182    24495485    26369729    23537049    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    20075255    26108605    28648823    28004739    20798317    26823975    21282665   

EMBL

BABH01002459    JTDY01008045    KOB64779.1    KQ458880    KPJ04643.1    KQ460154    + More
KPJ17295.1    NWSH01000306    PCG77586.1    AGBW02008030    OWR54266.1    ODYU01000763    SOQ36040.1    KK852522    KDR22082.1    NEVH01005885    PNF38468.1    CH477566    EAT38932.1    KQ971313    EEZ98734.1    AXCM01002040    JXUM01059293    KQ562045    KXJ76822.1    PYGN01000010    PSN58022.1    GBXI01002904    JAD11388.1    APCN01003620    AAAB01008807    EAA04181.2    GDHF01018908    JAI33406.1    GANO01001748    JAB58123.1    GFDL01011768    JAV23277.1    GAKP01015769    GAKP01015762    JAC43183.1    CH933809    EDW19663.1    GBYB01001284    JAG71051.1    DS231886    EDS43320.1    CP012525    ALC43292.1    BT128125    AEE63086.1    GAMC01005221    JAC01335.1    CH940647    EDW70069.1    CH916366    EDV97648.1    GGFJ01009186    MBW58327.1    GGFL01004150    MBW68328.1    GGFL01004672    MBW68850.1    GGFJ01009334    MBW58475.1    GDAI01002536    JAI15067.1    KA648552    AFP63181.1    GGFJ01008714    MBW57855.1    APGK01042984    KB741011    ENN75539.1    CH379067    EAL31367.3    AE014296    BT044295    AAF50297.1    ACH92360.1    CM002912    KMY98603.1    CM000159    EDW93045.1    CH954178    EDV51172.1    CH963847    EDW73594.1    CH902618    EDV40792.1    AAZX01003361    KC740957    AGM32781.1    GECU01020793    JAS86913.1    AY069172    AAL39317.1    GGFM01007819    MBW28570.1    JRES01000080    KNC34377.1    GECZ01027754    JAS42015.1    LJIG01002131    KRT84809.1    JXJN01004388    NNAY01001113    OXU25095.1    GEBQ01027414    GEBQ01021880    GEBQ01013549    GEBQ01002416    JAT12563.1    JAT18097.1    JAT26428.1    JAT37561.1    CCAG010013743    GFDF01005094    JAV08990.1    ABLF02039150    CVRI01000050    CRK99416.1    GEZM01007730    JAV94971.1    GGMS01002224    MBY71427.1    ABLF02014514    AJVK01059901    GL444289    EFN60991.1    GFXV01002889    MBW14694.1    UFQS01001185    UFQT01001185    SSX09588.1    SSX29384.1    UFQS01002322    UFQT01002322    SSX13793.1    SSX33214.1    GEDC01004017    JAS33281.1    GEDC01001878    JAS35420.1    GFTR01003743    JAW12683.1    GDHC01006793    JAQ11836.1    GL453920    EFN75186.1    KQ982753    KYQ51234.1    GL764022    EFZ18864.1    QCYY01003116    ROT65233.1    AJWK01023464    AJWK01023465    KQ976885    KYN07397.1    GDIP01126904    LRGB01002851    JAL76810.1    KZS05975.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000027135    UP000075920    UP000235965    UP000008820    UP000007266    UP000075883    UP000075884    UP000069940    UP000249989    UP000245037    UP000075880    UP000075881    UP000075902    UP000075840    UP000007062    UP000075903    UP000075882    UP000075900    UP000095300    UP000076407    UP000009192    UP000095301    UP000002320    UP000092553    UP000075901    UP000008792    UP000001070    UP000019118    UP000001819    UP000000803    UP000091820    UP000002282    UP000008711    UP000007798    UP000069272    UP000192221    UP000007801    UP000002358    UP000037069    UP000092443    UP000092460    UP000215335    UP000078200    UP000192223    UP000092444    UP000007819    UP000183832    UP000092462    UP000000311    UP000079169    UP000008237    UP000075809    UP000283509    UP000092461    UP000078542    UP000076858   

PRIDE

H9JFJ4    Q9VSW4    Q8T0M6   

Pfam

PF01765   RRF        + More
PF00225   Kinesin

Interpro

IPR023584   Ribosome_recyc_fac_dom        + More
IPR002661   Ribosome_recyc_fac       
IPR036191   RRF_sf       
IPR027417   P-loop_NTPase       
IPR036961   Kinesin_motor_dom_sf       
IPR001752   Kinesin_motor_dom       
IPR027640   Kinesin-like_fam       

SUPFAM

SSF55194   SSF55194        + More
SSF52540   SSF52540       

Gene 3D

3.40.850.10    

CDD

cd00520  RRF

ProteinModelPortal

H9JFJ4   A0A0L7KP94   A0A194QGH9   A0A194RIY1   A0A2A4K0P3   A0A212FKK7   + More
A0A2H1V5B3   A0A067RE93   A0A182WI37   A0A2J7RCB9   Q16WG4   A0A1S4FLR2   D6WBQ5   A0A182MBM7   A0A182N7G1   A0A182GF64   A0A2P8ZND4   A0A182IWI8   A0A182K0Q2   A0A182TN27   A0A0A1XLF1   A0A182I6D4   Q7QIE2   A0A182V6G6   A0A182L400   A0A182R6P6   A0A0K8V3I3   U5EVR6   A0A1Q3F6V6   A0A034VNS6   A0A1I8P6V6   A0A182X274   B4KX20   A0A0C9QDC5   A0A1I8NBK3   B0WC75   A0A0M4EN57   A0A182SD24   J3JY02   W8CB20   B4LE26   B4IYH5   A0A2M4BZ13   A0A2M4CU16   A0A2M4CU53   A0A2M4BZG8   A0A0K8TL14   T1PIC7   A0A2M4BXQ1   N6T5R9   Q29F88   Q9VSW4   A0A0J9RS36   A0A1A9W4C6   B4PEZ0   B3NCE2   B4MN38   A0A182FFJ5   A0A1W4VP28   B3M6E3   K7J7S1   R4UWU4   A0A1B6IJ35   Q8T0M6   A0A2M3ZJD9   A0A0L0CQD6   A0A1I8P6U0   A0A1A9YIA2   A0A1B6EVL2   A0A0T6BBX2   A0A1B0AVT3   A0A232F347   A0A1A9UGD0   A0A1B6KM94   A0A1W4XSC9   A0A1B0G3B0   A0A1L8DRK8   A0A1I8P717   X1XBB2   A0A1J1IGT5   A0A1Y1NAN7   A0A2S2Q0Y1   J9JR21   A0A1B0GPP0   E2AZY8   A0A2H8TKM8   A0A336MG77   A0A336MRP8   A0A1B6E5S0   A0A1B6EC03   A0A224XWZ4   A0A1S4EL10   A0A146LYX7   E2CA31   A0A151WTR9   E9IKN9   A0A3R7PAG5   A0A1B0CQE4   A0A195D3C3   A0A0P5TU04  

PDB

6NU2     E-value=2.13585e-25,     Score=283

KEGG

101737499    K02838 ribosome recycling factor | (RefSeq) ribosome-recycling factor, mitochondrial

GO

GO:0006412   GO:0043023   GO:0005739   GO:0032543   GO:0007018   GO:0016021   GO:0008017   GO:0003777   GO:0005524  

PANTHER

PTHR20982   PTHR24115  

Length:

187

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00023

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01624

outside

1  -  187

 

 

Pi

13.02076

Theta

16.696163

Tajima's D

-1.093427

CLR

35.415711

CSRT

0.121993900304985

Interpretation

Uncertain