SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11092
Pre Gene Modal
BGIBMGA008569
Annotation
Uncharacterized_protein_OBRU01_08628_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 4.881
 

Sequence

CDS
ATGTTCAGTCTACCACCAGCGCGAGCAATTTTCTACGGAGTCACAGCTGTAGCGGCGCTCTTTAAGACCATATTTGGATGTATGCTCATCCACGGAACATTTAGGAAAAAGCCAAGCTTCACGTGGCCTTGGTTAATTGTTTCGTGGGCGTTCTGCGTGGTCCTGACCGTCCTGTCAGTAGCCGGAGTCGTTTTCATTTCGTACAACAAGAACTTGGAGAACAACGCTGAAATCAGCTCTGTTATCTCCATATATTTCCTTTATACCATTGTCCTGTTCTACTTCATATCGGTCGTGAACAGTAGGAGACAAGAGATGACAGCAGATGAATTCACGTATTCGTCGAGGAGGATACGCAAGATGAACAGCTACTATTACTCATGA
Protein
MFSLPPARAIFYGVTAVAALFKTIFGCMLIHGTFRKKPSFTWPWLIVSWAFCVVLTVLSVAGVVFISYNKNLENNAEISSVISIYFLYTIVLFYFISVVNSRRQEMTADEFTYSSRRIRKMNSYYYS

Summary

Ontologies

Topology

Length:
127
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.74622
Exp number, first 60 AAs:
39.62002
Total prob of N-in:
0.02310
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  32
inside
33  -  43
TMhelix
44  -  66
outside
67  -  75
TMhelix
76  -  98
inside
99  -  127
 
 

Population Genetic Test Statistics

Pi
212.767798
Theta
184.245832
Tajima's D
0.12016
CLR
0.849216
CSRT
0.40317984100795
Interpretation
Uncertain
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