Silkworm Genome Informatics Database

Gene

KWMTBOMO11091

Annotation

PREDICTED:_uncharacterized_protein_LOC105841970_[Bombyx_mori]

Location

Bomo_Chr18(-):12692127-12695265 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.817

CDS

ATGGGTGTGCCCATGGTGAAAAAATGTTGCTTCTGCGCTACATTACACACCGGGACATTAATAATAGGATATTTATCTGCAGTATGGGCGATCTTGGAACTCACTCTCTACTGTCTCCTGGTTACTCTTGCTCCTATCGGAAAGAATGGAACTGTGTCGGTACATAAACTGGTGTTATACATAGCCTCTGCTGTTGTCAGCGGAACGAATCTTATATCTTCGATACTTCTAATTGTAGCTGCTTACAAGAAAATGGCGTCGCTGACTTTGCCGTGGACGATAGTGACAGGGATTGTCACATCGGTACTCTTCCTCTTGTGCCTAACAGGAATCAGCCTCGTGATTCAGGATACGGGTGAACTACTCGAAGTTGAAATCATTGTGATCGTACTCCATTTAGCTAAAGCGTGTATCTCAGTGTACTGTATCATTGTAGTGCACAGCAGACACAAACAGATTATGTATGAAGAAGATACGGCCGCATTTCAACATTCGGGGAGACTTCGTTACGATCCAGTTAAGATTGAAGATCATGTTTTTTGA

Protein

MGVPMVKKCCFCATLHTGTLIIGYLSAVWAILELTLYCLLVTLAPIGKNGTVSVHKLVLYIASAVVSGTNLISSILLIVAAYKKMASLTLPWTIVTGIVTSVLFLLCLTGISLVIQDTGELLEVEIIVIVLHLAKACISVYCIIVVHSRHKQIMYEEDTAAFQHSGRLRYDPVKIEDHVF

Uniprot

A0A2A4JJU1 A0A212EWP6 A0A212FKH3 A0A1E1WCZ1 A0A2H1UZR5 A0A194QIA6 + More
A0A3S2NRP1 S4PVF6 A0A0L7LH61 A0A2H1V1E1

Pubmed

22118469 26354079 23622113 26227816

EMBL

NWSH01001325 PCG71683.1 AGBW02011923 OWR45928.1 AGBW02008030 OWR54247.1 + More
GDQN01009555 GDQN01006200 GDQN01003182 GDQN01002989 JAT81499.1 JAT84854.1 JAT87872.1 JAT88065.1 ODYU01000024 SOQ34095.1 KQ458880 KPJ04660.1 RSAL01000118 RVE46795.1 GAIX01008623 JAA83937.1 JTDY01001089 KOB74908.1 SOQ34094.1

Proteomes

UP000218220 UP000007151 UP000053268 UP000283053 UP000037510

Pfam

PF15860 DUF4728

Interpro

IPR031720 DUF4728

ProteinModelPortal

A0A2A4JJU1 A0A212EWP6 A0A212FKH3 A0A1E1WCZ1 A0A2H1UZR5 A0A194QIA6 + More
A0A3S2NRP1 S4PVF6 A0A0L7LH61 A0A2H1V1E1

KEGG

105841970 no KO assigned | (RefSeq) uncharacterized LOC105841970

GO

GO:0016021

Length:

180

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

91.5509000000001

Exp number, first 60 AAs:

26.28973

Total prob of N-in:

0.99754

POSSIBLE N-term signal

sequence

inside

1 - 20

TMhelix

21 - 43

outside

44 - 57

TMhelix

58 - 80

inside

81 - 91

TMhelix

92 - 114

outside

115 - 123

TMhelix

124 - 146

inside

147 - 180

Pi

130.344969

Theta

144.921866

Tajima's D

-0.773847

CLR

48.506883

CSRT

0.179091045447728

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics