SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11086  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008565
Annotation
PREDICTED:_visual_system_homeobox_2-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.947
 

Sequence

CDS
ATGCAAGCGATGAGCGCTAACGCAAGCGCTCCCAGAGCACCCCAGCGCTCTCCATTCGCCATCCAAGAGCTGCTAGGTCTCTCCGATAATCGGGAGAGCAGAGAGAGATACTTCGAGAGCAGAGATGGAGATAGAGTACTCAATTTATCTGAGAGCAGAGAGCCCCGGTCGGCTTACACTCCTCAGTTTCCTCTGCCGGCCTCTGTTGCGAGTCGCGTGGCCTATGCAGCAGCTTTCAATGCTCAAGCTGCAGTAGCCGCAGCCTTCCTCCCGGGTCCTCCATTACTGCATCATCCACCAGGTAAATACCTATAG
Protein
MQAMSANASAPRAPQRSPFAIQELLGLSDNRESRERYFESRDGDRVLNLSESREPRSAYTPQFPLPASVASRVAYAAAFNAQAAVAAAFLPGPPLLHHPPGKYL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
104
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.7837
Exp number, first 60 AAs:
0.00035
Total prob of N-in:
0.52890
outside
1  -  104
 
 

Population Genetic Test Statistics

Pi
103.874719
Theta
153.275066
Tajima's D
-0.900774
CLR
0.096864
CSRT
0.155192240387981
Interpretation
Uncertain
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