Gene

KWMTBOMO11085

Pre Gene Modal

BGIBMGA008301

Annotation

PREDICTED:_39S_ribosomal_protein_L14?_mitochondrial_[Plutella_xylostella]

Location

Bomo_Chr18(-):12412783-12413546      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.332

CDS

ATGTTTAGAACTATATTAAATAAATTAAATCCAGTCGAGTTAACATGCGGATTCCACACTACAGCCTGCTTGAATGAAGTTAGGCTACTTACAAGGCTTCGTGTTGTTGATAACTCTGAAATCGGAATGCGAGCCATGGCCGAAGGAAAACCTCCGAAAGTAATTTGTGTATACAACAAACAACGTGTCGGCTTTATTGGTGACAGAGTAATGGTAGCTATCAAAGGGCAAAAGAAGAAAGGCATTCTTGTAGGTCTCAAGCAAACACAAAAGGTCAAAGTACCAAAGTTCGACAGCAACAACATAGTTTTAATAGATGACAACGGAACACCTCTAGGAACCAGAATACATGTACCCATACCAACTATCCTCCGAACAATTTTGAAAGAGAAAACTCATTCTAAAGGAGCTGATTACACAAAACTACTGGCCATAGCCACCAAATTTGTTTAA

Protein

MFRTILNKLNPVELTCGFHTTACLNEVRLLTRLRVVDNSEIGMRAMAEGKPPKVICVYNKQRVGFIGDRVMVAIKGQKKKGILVGLKQTQKVKVPKFDSNNIVLIDDNGTPLGTRIHVPIPTILRTILKEKTHSKGADYTKLLAIATKFV

Uniprot

I4DL59   A0A2A4JA29   A0A0L7KMZ9   A0A194RJ00   A0A2H1VZ81   A0A182SZ07   + More
U5EWW9   A0A034VZA9   A0A0C9RE12   A0A182HWB6   A0A182RW61   A0A1L8E0G7   A0A182MMY5   A0A182YB17   A0A3F2YUW6   A0A1J1HZK0   A0A084VHS5   A0A1L8E0U8   A0A182U2E3   A0A1A9Z4V9   A0A1B0G683   A0A182VKB6   A0A1S4H5V3   A0A182X5N2   Q5TVZ6   A0A0K8VVM0   Q7QHD9   A0A1B0BFU6   A0A1S4H6Q8   A0A1A9VSC7   A0A1A9Y1R1   H9JFK4   A0A182JBX7   A0A1B0CX31   B0WL56   A0A2M4AXL2   W5J987   A0A182WDJ4   A0A1Q3FE94   W8C1R6   A0A2M3ZK38   A0A2M4C2H3   A0A2M4C2D8   A0A182FKL5   A0A336MFP7   A0A0L0CC74   A0A0M4EIY2   A0A232FGH7   A0A3B0JDE8   V5GE96   A0A154P1G7   A0A1Y1K7E9   A0A1A9WX37   A0A2A3EAA0   K7IPC6   Q17CT6   B4M6P6   Q9W4Z2   A0A182HC45   A0A1L8EDI3   B4L221   A0A1L8ED47   A0A1I8P506   Q29IQ5   B4H2V2   B4NC37   A0A023EH66   A0A182K265   A0A182NZN0   A0A1S3D3U0   A0A310S4P0   B3P912   A0A1W4UW74   B4Q168   A0A182QF81   A0A088AHF1   A0A0T6B6G0   B4JL96   A0A182N2B0   A0A0L7RIY5   A0A2M3ZK41   A0A0N0BBN6   A0A1W4X6B0   A0A2J7Q5Y7   A0A1B6ECD6   A0A158NB27   A0A0K8TSV3   F4W3T1   T1EAU5   A0A067RJW3   A0A151WZR4   U4UHK8   E2C6B6   A0A1B0D8S1   B3MYV1   A0A1I8ND18   A0A195DYX8   A0A026X392  

Pubmed

22651552    26227816    26354079    25348373    25244985    20966253    + More
24438588    12364791    19121390    20920257    23761445    24495485    26108605    28648823    28004739    20075255    17510324    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    15632085    24945155    17550304    21347285    26369729    21719571    24845553    23537049    20798317    25315136    24508170    30249741   

EMBL

AK402027    BAM18649.1    NWSH01002437    PCG68300.1    JTDY01008645    KOB64461.1    + More
KQ460154    KPJ17315.1    ODYU01005374    SOQ46151.1    GANO01002782    JAB57089.1    GAKP01011510    JAC47442.1    GBYB01011367    JAG81134.1    APCN01001484    GFDF01001893    JAV12191.1    AXCM01007440    CVRI01000036    CRK92954.1    ATLV01013224    KE524847    KFB37519.1    GFDF01001892    JAV12192.1    CCAG010011797    AAAB01008816    EAL41596.3    GDHF01009714    GDHF01006245    JAI42600.1    JAI46069.1    EAA05152.3    JXJN01013666    BABH01002415    AJWK01033166    DS231980    EDS30229.1    GGFK01012164    MBW45485.1    ADMH02001908    ETN60551.1    GFDL01009176    JAV25869.1    GAMC01010931    GAMC01010926    JAB95629.1    GGFM01008135    MBW28886.1    GGFJ01010318    MBW59459.1    GGFJ01010312    MBW59453.1    UFQS01000848    UFQT01000848    SSX07281.1    SSX27623.1    JRES01000586    KNC30023.1    CP012528    ALC48966.1    NNAY01000229    OXU29861.1    OUUW01000003    SPP78643.1    GALX01006132    JAB62334.1    KQ434786    KZC05078.1    GEZM01092945    JAV56421.1    KZ288310    PBC28657.1    CH477304    EAT44186.1    CH940653    EDW62463.1    AE014298    AY071662    AY075539    AL133503    AAF45775.1    AAL49284.1    AAL68346.1    AGB95032.1    CAB63504.1    JXUM01126431    KQ567067    KXJ69640.1    GFDG01002150    JAV16649.1    CH933810    EDW07742.1    GFDG01002151    JAV16648.1    CH379063    EAL32598.1    CH479204    EDW30669.1    CH964239    EDW82396.2    GAPW01005392    JAC08206.1    KQ775960    OAD52242.1    CH954183    EDV45617.1    CM000162    EDX01375.1    AXCN02001729    LJIG01009758    KRT82439.1    CH916370    EDW00349.1    KQ414583    KOC70794.1    GGFM01008143    MBW28894.1    KQ435969    KOX67842.1    NEVH01017543    PNF24000.1    GEDC01001741    JAS35557.1    ADTU01010779    GDAI01000588    JAI17015.1    GL887419    EGI71142.1    GAMD01000102    JAB01489.1    KK852636    KDR19716.1    KQ982630    KYQ53397.1    KB632168    ERL89355.1    GL453058    EFN76515.1    AJVK01027688    CH902632    EDV32795.1    KQ980050    KYN18036.1    KK107039    QOIP01000006    EZA61864.1    RLU21166.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000075901    UP000075840    UP000075900    + More
UP000075883    UP000076408    UP000075882    UP000183832    UP000030765    UP000075902    UP000092445    UP000092444    UP000075903    UP000076407    UP000007062    UP000092460    UP000078200    UP000092443    UP000005204    UP000075880    UP000092461    UP000002320    UP000000673    UP000075920    UP000069272    UP000037069    UP000092553    UP000215335    UP000268350    UP000076502    UP000091820    UP000242457    UP000002358    UP000008820    UP000008792    UP000000803    UP000069940    UP000249989    UP000009192    UP000095300    UP000001819    UP000008744    UP000007798    UP000075881    UP000075885    UP000079169    UP000008711    UP000192221    UP000002282    UP000075886    UP000005203    UP000001070    UP000075884    UP000053825    UP000053105    UP000192223    UP000235965    UP000005205    UP000007755    UP000027135    UP000075809    UP000030742    UP000008237    UP000092462    UP000007801    UP000095301    UP000078492    UP000053097    UP000279307   

PRIDE

H9JFK4    Q9W4Z2   

Pfam

PF00238   Ribosomal_L14        + More
PF18569   Thioredoxin_16

Interpro

IPR036853   Ribosomal_L14_sf        + More
IPR000218   Ribosomal_L14P       
IPR041503   AIMP2_thioredoxin       

SUPFAM

SSF50193   SSF50193       

Gene 3D

2.40.150.20    

ProteinModelPortal

I4DL59   A0A2A4JA29   A0A0L7KMZ9   A0A194RJ00   A0A2H1VZ81   A0A182SZ07   + More
U5EWW9   A0A034VZA9   A0A0C9RE12   A0A182HWB6   A0A182RW61   A0A1L8E0G7   A0A182MMY5   A0A182YB17   A0A3F2YUW6   A0A1J1HZK0   A0A084VHS5   A0A1L8E0U8   A0A182U2E3   A0A1A9Z4V9   A0A1B0G683   A0A182VKB6   A0A1S4H5V3   A0A182X5N2   Q5TVZ6   A0A0K8VVM0   Q7QHD9   A0A1B0BFU6   A0A1S4H6Q8   A0A1A9VSC7   A0A1A9Y1R1   H9JFK4   A0A182JBX7   A0A1B0CX31   B0WL56   A0A2M4AXL2   W5J987   A0A182WDJ4   A0A1Q3FE94   W8C1R6   A0A2M3ZK38   A0A2M4C2H3   A0A2M4C2D8   A0A182FKL5   A0A336MFP7   A0A0L0CC74   A0A0M4EIY2   A0A232FGH7   A0A3B0JDE8   V5GE96   A0A154P1G7   A0A1Y1K7E9   A0A1A9WX37   A0A2A3EAA0   K7IPC6   Q17CT6   B4M6P6   Q9W4Z2   A0A182HC45   A0A1L8EDI3   B4L221   A0A1L8ED47   A0A1I8P506   Q29IQ5   B4H2V2   B4NC37   A0A023EH66   A0A182K265   A0A182NZN0   A0A1S3D3U0   A0A310S4P0   B3P912   A0A1W4UW74   B4Q168   A0A182QF81   A0A088AHF1   A0A0T6B6G0   B4JL96   A0A182N2B0   A0A0L7RIY5   A0A2M3ZK41   A0A0N0BBN6   A0A1W4X6B0   A0A2J7Q5Y7   A0A1B6ECD6   A0A158NB27   A0A0K8TSV3   F4W3T1   T1EAU5   A0A067RJW3   A0A151WZR4   U4UHK8   E2C6B6   A0A1B0D8S1   B3MYV1   A0A1I8ND18   A0A195DYX8   A0A026X392  

PDB

6GB2     E-value=1.63665e-27,     Score=299

KEGG

101735796    K02874 large subunit ribosomal protein L14 | (RefSeq) 39S ribosomal protein L14, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0003735   GO:0006412   GO:0005840   GO:0005739   GO:0005762   GO:0032543   GO:0000155   GO:0000160   GO:0005216   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

150

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00126

Exp number, first 60 AAs:

0.00083

Total prob of N-in:

0.18153

outside

1  -  150

 

 

Pi

52.191088

Theta

90.646219

Tajima's D

-1.24796

CLR

1.059253

CSRT

0.0965451727413629

Interpretation

Uncertain