Gene

KWMTBOMO11083  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008302

Annotation

elongation_factor_1_gamma_[Bombyx_mori]

Location

Bomo_Chr18(-):12385248-12390846      View in EpiBrowser

Full name

Elongation factor 1-gamma      

Alternative Name

eEF-1B gamma

Location in the cell

ER   Reliability : 1.989

CDS

ATGGCGGCCGGGGTACTTTACACTTATCCGGAAAACTTCCGCGCTTATAAAGCGTTGATCGCCGCACAATATTCCGGGACTGATGTGAAAGTAGCACCGAATTTCGTATTTGGCGAGACCAACAAGTCCGAAGACTTCTTGAAGAAGTTTCCTGCCGGAAAAGTGCCTGCATTCGAAAGTGCCGATGGAAAGGTGCTTCTAACTGAAAGCAATGCCATCGCTTACTACGTTGCCAATGAAAGTCTCCGCGGAGGAGATCTGGCTACCCAAGCCCGTGTCTGGCAGTGGGCATCATGGTCTGACAGCGAACTACTGCCTGCTTCCTGCGCTTGGGTCTTCCCTTACCTTGGTATCATGCAATTCAACAAACAGAATGTTGAACGTGCAAAGTCTGACCTACTGGCCGCCTTAAAAGTACTGGACGGACATCTTCTCACACGCACCTTCCTTGTTACCGAGAGAATCACACTTGCCGATGTCATTGTCTTCAGTACACTGCTGCATGCTTTCCAGCACGTGCTAGACCCGAGCGTCCGTTCGTCGCTGATAAACGTTCAGCGTTGGTTCCTGACCGTCGCCCACCAGCCGCAAGTGTCGGCCGTCGTCGGCTCGCTCACGCTCTGTGCGGCTCCTCCTACATACGACCCTAAAAAGTACCAGGAGTTAGCTGGTGCACAGAACAAGAAGGAGGGCAAAAAAGATAAGAAGTGTGAAAAGAAAGAGCAACCCAAGAAGAAGGAGGAAGTTGTTCCTGACCTTGAAGAGGAGGAGCTTGAAAAGCCTAAGGAGTCCAAGGACCCCTTCGACTCTATGCCTAAAGGTACCTTCAACATGGATGATTTCAAGCGTGTCTACTCCAACGAAGACGAAGCTAAATCTATTCCTTACTTCTGGGAGAAGTTTGACCCCGAGAACTATTCCATTTGGTATGCTGAATACAAATACCCCGAGGAACTCGCTAAAGTGTTCATGAGCTGTAACCTTATTACGGGTATGTTCCAGAGGTTAGACAAAATGCGCAAACAGGCTTTCGCATCCGTCTGCCTGTTTGGTGAAGACAACAATTCCACCATCTCTGGAGTGTGGGTGTGGCGCGGAAAGGAGCTCGTGTTCCCGCTGTCGTCTGATTGGCAGGTGGACTACGAGTCCTACGACTGGAAGAAACTGGATCCTTCGAGCGAGGAGACCAAGAAACTTGTCCAGGACTACTTCTCGTGGAACGGAACCGACAAAGACGGTAGAAAGTTCAACCAGGGCAAGATATTCAAGTGA

Protein

MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNKKEGKKDKKCEKKEQPKKKEEVVPDLEEEELEKPKESKDPFDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK

Subunit

EF-1 is composed of four subunits: alpha, beta, delta, and gamma.

Similarity

Belongs to the GST superfamily.

Keywords

Direct protein sequencing   Elongation factor   Protein biosynthesis   Complete proteome   Reference proteome  

Feature

chain  Elongation factor 1-gamma

Uniprot

Q9BPS3   S4PN00   I4DIL8   A0A194QGN5   A0A194RID0   A0A212EWN2   + More
A0A3G1T1I4   A0A3G1T1F8   I4DMB2   A0A2A4JA49   A0A1D1XTP4   A0A1B6LWB6   Q1HR56   A0A0C9R3S4   A0A0A1WS78   A0A034W2M7   A4FVM6   P12261   A0A023EUE6   A0A182HEA4   B4MBU9   Q16QH0   E0W3H6   A0A084VNU6   B4K5X9   A0A182RM24   A0A182Y4T9   A0A182M5A8   A0A1B6CAJ7   B0X828   W8BWG5   A0A182RQL8   A0A0K8UHY2   A0A1Y1KTZ2   A0A336KV74   A0A1Q3F5V4   A0A182JD04   A0A182WY30   A0A182UVI1   A0A182TI15   A0A182HMT3   A0A182T6S8   K7J593   Q7PNJ7   A0A182K109   A0A182QHF6   A0A0M4EFX4   Q29BX7   T1PDN2   A0A2A3EL86   V9II07   A0A088A224   A0A1L8EEZ1   A0A0Q9X2H7   A0A1I8MN69   A0A195BPG8   A0A1L8EEN7   A0A2M3YXA2   A0A1J1J2I4   A0A1I8PWY8   A0A182VV48   T1DMX9   A0A2M3ZYR5   A0A232EU43   B4JYJ3   A0A2M3ZYP9   A0A182FB18   A0A158NDS8   E2C8I5   B3M1H6   A0A026WLW7   A0A3L8DIB4   A0A151X4K0   F4W808   W5J821   A0A182N0H4   A0A348G616   A0A0L0CHP6   A0A0K8TPD9   A0A0T6B2R9   A0A0K8VKL0   A0A1W4U5I2   A0A1L8DRW7   B4HZ80   A0A195C5T8   A0A195D909   A0A0B4JD11   Q9NJH0   A0A0C9RB11   B4PQ51   U5EXP2   A0A0M8ZWP6   D3TPG3   A0A1B0FCD3   A0A0P5JZB9   A0A0P5DPB1   B4QZI7   A0A0P5ZTQ5   A0A0P5KSA6   B3P5J2  

Pubmed

12005049    19121390    23622113    22651552    26354079    22118469    + More
17204158    25830018    25348373    3666137    24945155    26483478    17994087    17510324    20566863    24438588    25244985    24495485    28004739    20075255    12364791    14747013    17210077    15632085    25315136    28648823    21347285    20798317    24508170    30249741    21719571    20920257    23761445    26108605    26369729    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    17550304    20353571   

EMBL

BABH01002413    AB046361    BAB21108.1    GAIX01003270    JAA89290.1    AK401136    + More
BAM17758.1    KQ458880    KPJ04667.1    KQ460154    KPJ17317.1    AGBW02011923    OWR45918.1    MG992385    AXY94823.1    MG992388    AXY94826.1    AK402430    BAM19052.1    NWSH01002437    PCG68302.1    GDJX01022176    JAT45760.1    GEBQ01011994    JAT27983.1    DQ440238    ABF18271.1    GBYB01010974    JAG80741.1    GBXI01012590    JAD01702.1    GAKP01010003    JAC48949.1    BC134217    AAI34218.1    M28020    GAPW01001529    JAC12069.1    JXUM01131224    KQ567682    KXJ69323.1    CH940656    EDW58570.2    CH477748    EAT36644.1    DS235882    EEB20182.1    ATLV01014923    KE524996    KFB39640.1    CH933806    EDW16216.2    AXCM01001470    GEDC01026993    JAS10305.1    DS232472    EDS42297.1    GAMC01000890    JAC05666.1    GDHF01026354    JAI25960.1    GEZM01075625    JAV64038.1    UFQS01000550    UFQT01000550    SSX04830.1    SSX25193.1    GFDL01012152    JAV22893.1    APCN01004903    AAZX01013222    AAAB01008963    EAA12078.5    AXCN02001411    CP012526    ALC47154.1    CM000070    EAL26869.1    KA646245    AFP60874.1    KZ288215    PBC32573.1    JR048758    AEY60758.1    GFDG01001640    JAV17159.1    CH964251    KRF99731.1    KQ976424    KYM88412.1    GFDG01001639    JAV17160.1    GGFM01000125    MBW20876.1    CVRI01000066    CRL05996.1    GAMD01003350    JAA98240.1    GGFK01000362    MBW33683.1    NNAY01002166    OXU21890.1    CH916377    EDV90755.1    GGFK01000363    MBW33684.1    ADTU01012934    GL453666    EFN75715.1    CH902617    EDV43267.1    KK107152    EZA57052.1    QOIP01000007    RLU20180.1    KQ982548    KYQ55214.1    GL887888    EGI69678.1    ADMH02001971    ETN60121.1    FX985555    BBF97889.1    JRES01000366    KNC31903.1    GDAI01001384    JAI16219.1    LJIG01016126    KRT81537.1    GDHF01012921    JAI39393.1    GFDF01004970    JAV09114.1    CH480819    EDW53337.1    KQ978251    KYM95995.1    KQ981153    KYN08904.1    AE014297    ADV37398.1    AF148813    AF148814    BT001612    BT012478    GBYB01010292    JAG80059.1    CM000160    EDW98320.1    KRK04213.1    GANO01002450    JAB57421.1    KQ435821    KOX72467.1    EZ423315    ADD19591.1    CCAG010016734    GDIQ01191415    JAK60310.1    GDIP01154499    JAJ68903.1    CM000364    EDX14825.1    GDIP01042961    JAM60754.1    GDIQ01187276    JAK64449.1    CH954182    EDV53242.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000218220    UP000069940    + More
UP000249989    UP000008792    UP000008820    UP000009046    UP000030765    UP000009192    UP000075900    UP000076408    UP000075883    UP000002320    UP000075880    UP000076407    UP000075903    UP000075902    UP000075840    UP000075901    UP000002358    UP000007062    UP000075881    UP000075886    UP000092553    UP000001819    UP000242457    UP000005203    UP000007798    UP000095301    UP000078540    UP000183832    UP000095300    UP000075920    UP000215335    UP000001070    UP000069272    UP000005205    UP000008237    UP000007801    UP000053097    UP000279307    UP000075809    UP000007755    UP000000673    UP000075884    UP000037069    UP000192221    UP000001292    UP000078542    UP000078492    UP000000803    UP000002282    UP000053105    UP000092444    UP000000304    UP000008711   

PRIDE

Q9BPS3    P12261    Q9NJH0   

Pfam

PF02798   GST_N        + More
PF00647   EF1G
PF00043   GST_C

Interpro

IPR004046   GST_C        + More
IPR001662   EF1B_G_C       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004045   Glutathione_S-Trfase_N       
IPR040079   Glutathione_S-Trfase       
IPR036433   EF1B_G_C_sf       
IPR010987   Glutathione-S-Trfase_C-like       

SUPFAM

SSF52833   SSF52833        + More
SSF47616   SSF47616       
SSF89942   SSF89942       

Gene 3D

3.30.70.1010    

ProteinModelPortal

Q9BPS3   S4PN00   I4DIL8   A0A194QGN5   A0A194RID0   A0A212EWN2   + More
A0A3G1T1I4   A0A3G1T1F8   I4DMB2   A0A2A4JA49   A0A1D1XTP4   A0A1B6LWB6   Q1HR56   A0A0C9R3S4   A0A0A1WS78   A0A034W2M7   A4FVM6   P12261   A0A023EUE6   A0A182HEA4   B4MBU9   Q16QH0   E0W3H6   A0A084VNU6   B4K5X9   A0A182RM24   A0A182Y4T9   A0A182M5A8   A0A1B6CAJ7   B0X828   W8BWG5   A0A182RQL8   A0A0K8UHY2   A0A1Y1KTZ2   A0A336KV74   A0A1Q3F5V4   A0A182JD04   A0A182WY30   A0A182UVI1   A0A182TI15   A0A182HMT3   A0A182T6S8   K7J593   Q7PNJ7   A0A182K109   A0A182QHF6   A0A0M4EFX4   Q29BX7   T1PDN2   A0A2A3EL86   V9II07   A0A088A224   A0A1L8EEZ1   A0A0Q9X2H7   A0A1I8MN69   A0A195BPG8   A0A1L8EEN7   A0A2M3YXA2   A0A1J1J2I4   A0A1I8PWY8   A0A182VV48   T1DMX9   A0A2M3ZYR5   A0A232EU43   B4JYJ3   A0A2M3ZYP9   A0A182FB18   A0A158NDS8   E2C8I5   B3M1H6   A0A026WLW7   A0A3L8DIB4   A0A151X4K0   F4W808   W5J821   A0A182N0H4   A0A348G616   A0A0L0CHP6   A0A0K8TPD9   A0A0T6B2R9   A0A0K8VKL0   A0A1W4U5I2   A0A1L8DRW7   B4HZ80   A0A195C5T8   A0A195D909   A0A0B4JD11   Q9NJH0   A0A0C9RB11   B4PQ51   U5EXP2   A0A0M8ZWP6   D3TPG3   A0A1B0FCD3   A0A0P5JZB9   A0A0P5DPB1   B4QZI7   A0A0P5ZTQ5   A0A0P5KSA6   B3P5J2  

PDB

5JPO     E-value=3.11094e-63,     Score=614

KEGG

692391    K03233 elongation factor 1-gamma | (RefSeq) Ef-1g; elongation factor 1 gamma

GO

GO:0003746   GO:0005634   GO:0005737   GO:0004364   GO:0006414   GO:0016740   GO:0016021   GO:0005853   GO:0005515   GO:0000155   GO:0000160   GO:0005216   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

423

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0456700000000001

Exp number, first 60 AAs:

0.00229

Total prob of N-in:

0.00626

outside

1  -  423

 

 

Pi

231.14965

Theta

204.674646

Tajima's D

0.321485

CLR

0.131076

CSRT

0.456877156142193

Interpretation

Uncertain