Gene

KWMTBOMO11080

Pre Gene Modal

BGIBMGA008561

Annotation

PREDICTED:_protein_stoned-B_[Plutella_xylostella]

Location

Bomo_Chr18(+):12353857-12357374      View in EpiBrowser

Full name

Protein stoned-B      

Location in the cell

Nuclear   Reliability : 1.943

CDS

ATGCCGAGACTCCCCAAAGAAGGACAAGGTGCATACACAACCCACAATCTCGTTTGTCGCATGGCTCTGACGTCATACGACCAAATACCCGCGGAGCTCGCCAAGTTCGCCTACGTGGAGTTCACGATGCCGGCCACGCAGGTCAGCCACGTGACCGTGAGGTCCGTCTCGCTTCAAGAGCACGACGGAGACCCACCAGAAAAATACGTTCGGTACCTGGCAAGGCATGAGTACACAGTGGGCATCGAACGTACGAGCGGTCAGGCCGCACCGGCGTACTCCTTGGCGACGACCGTTGAACGAACCGAACCGGAGCCTCCCGCGCCCGTAGCCCAGCCGCAACCGCCCTCTTCAGACTCCGACTCGGATTGA

Protein

MPRLPKEGQGAYTTHNLVCRMALTSYDQIPAELAKFAYVEFTMPATQVSHVTVRSVSLQEHDGDPPEKYVRYLARHEYTVGIERTSGQAAPAYSLATTVERTEPEPPAPVAQPQPPSSDSDSD

Description

Adapter protein involved in endocytic recycling of synaptic vesicles membranes. May act by mediating the retrieval of synaptotagmin protein Syt from the plasma membrane, thereby facilitating the internalization of multiple synaptic vesicles from the plasma membrane.

Subunit

Interacts with the second C2 domain of Syt.

Miscellaneous

StnA, which is involved in the same pathway, is derived from the same bicistronic transcript that encodes these two different proteins.

Similarity

Belongs to the Stoned B family.
Belongs to the adaptor complexes medium subunit family.

Keywords

Cell junction   Complete proteome   Cytoplasm   Endocytosis   Phosphoprotein   Reference proteome   Repeat   RNA editing   Synapse  

Feature

chain  Protein stoned-B

Uniprot

A0A2H1V6T2   A0A3S2NX65   A0A212EWQ6   A0A194QIB5   A0A194RIQ2   A0A1Y1MPJ5   + More
X2JCY4   X2JGF5   Q24212   A0A182SGF7   A0A0L0BU69   A0A0K8WA07   W8AEC2   A0A034WMA2   A0A0A1X3C8   B4JLH6   B4M3M6   B3NY92   B3MYJ3   B4PZM5   B4L401   A0A0M4EVJ5   B4MSS6   N6U810   B4IKP5   A0A1W4WCJ6   A0A3B0J8V3   B4GWD9   D2A1F7   B5DLN0   A0A1B0D2X0   A0A1I8PN02   U4UFG2   T1PKR8   A0A182J3L8   A0A1J1HYA0   A0A1I8MUZ3   A0A1I8MUZ5   W4VRV0   A0A182KZX5   A0A1B0CGV6   A0A0J7L8U9   A0A182R284   A0A182W660   A0A182QCE1   A0A1B0FRL3   W5JUE1   A0A182K7X5   A0A084VVK9   A0A087ZWA6   A0A182FIN1   A0A182MHT2   Q7QF90   A0A182IAZ2   A0A182XK11   A0A182NZS1   A0A2A3ELD1   A0A182N0Q3   V9IKG4   A0A182YF06   A0A182U8U8   A0A182UT88   Q17PU7   A0A195ES00   E2AEE6   E2BHG5   A0A1Q3FS79   A0A1Q3FRT0   A0A1Q3FS00   A0A1Q3FRS6   B0WH25   A0A0C9R519   A0A1Q3FS90   A0A151X6Z5   A0A182GC24   A0A1B6FEF8   A0A195D3T9   A0A1B6C031   A0A151I2J0   A0A158NSC9   A0A151JQZ7   A0A1B6K569   K7J344   A0A154P528   A0A3Q0IWV0   A0A3L8DB86   A0A310SHC4   E0VIN2   A0A067QJF2   A0A1A9WPK6   A0A1B6MIS1   E9G2M0   A0A224XIQ3   A0A0A9YNJ1   A0A2S2N6S1   A0A2H8TMM0   X1WWA8   A0A2P8XWW0  

Pubmed

22118469    26354079    28004739    10731132    12537568    12537572    + More
12537573    12537574    16110336    17569856    17569867    8844157    10407025    11069931    11160392    11312288    12907802    18327897    26108605    24495485    25348373    25830018    17994087    17550304    23537049    18362917    19820115    15632085    25315136    20966253    20920257    23761445    24438588    12364791    14747013    17210077    25244985    17510324    20798317    26483478    21347285    20075255    30249741    20566863    24845553    21292972    25401762    29403074   

EMBL

ODYU01000981    SOQ36553.1    RSAL01000118    RVE46802.1    AGBW02011923    OWR45913.1    + More
KQ458880    KPJ04670.1    KQ460154    KPJ17319.1    GEZM01030923    GEZM01030922    JAV85157.1    AE014298    AHN60010.1    AHN60009.1    U54982    JRES01001325    KNC23620.1    GDHF01020429    GDHF01004445    JAI31885.1    JAI47869.1    GAMC01020037    GAMC01020035    JAB86520.1    GAKP01004034    JAC54918.1    GBXI01009104    JAD05188.1    CH916370    EDW00429.1    CH940651    EDW65401.1    CH954180    EDV47677.1    CH902632    EDV32687.1    CM000162    EDX03153.1    KRK07157.1    CH933810    EDW07279.1    CP012528    ALC50014.1    CH963851    EDW75165.1    APGK01045410    KB741035    ENN74722.1    CH480854    EDW51659.1    OUUW01000003    SPP78617.1    CH479194    EDW27023.1    KQ971338    EFA02108.2    CH379063    EDY72432.1    AJVK01002889    KB632166    ERL89321.1    KA649367    AFP63996.1    CVRI01000020    CRK91113.1    GANO01000094    JAB59777.1    AJWK01011617    AJWK01011618    LBMM01000258    KMR02566.1    AXCN02002248    CCAG010000553    ADMH02000465    ETN66369.1    ATLV01017193    KE525157    KFB42003.1    AXCM01001982    AAAB01008846    EAA06689.5    APCN01001365    KZ288215    PBC32528.1    JR049983    AEY61147.1    CH477189    EAT48744.1    KQ981993    KYN31030.1    GL438828    EFN68198.1    GL448287    EFN84934.1    GFDL01004733    JAV30312.1    GFDL01004736    JAV30309.1    GFDL01004720    JAV30325.1    GFDL01004745    JAV30300.1    DS231932    EDS27476.1    GBYB01007867    GBYB01008454    JAG77634.1    JAG78221.1    GFDL01004723    JAV30322.1    KQ982459    KYQ56147.1    JXUM01053608    KQ561784    KXJ77547.1    GECZ01021173    JAS48596.1    KQ976881    KYN07575.1    GEDC01030679    JAS06619.1    KQ976543    KYM80973.1    ADTU01024825    KQ978642    KYN29491.1    GECU01001119    JAT06588.1    KQ434819    KZC06961.1    QOIP01000010    RLU17757.1    KQ769068    OAD52980.1    DS235201    EEB13238.1    KK853289    KDR08903.1    GEBQ01004185    JAT35792.1    GL732530    EFX86292.1    GFTR01008413    JAW08013.1    GBHO01009012    JAG34592.1    GGMR01000294    MBY12913.1    GFXV01003612    MBW15417.1    ABLF02033843    PYGN01001237    PSN36394.1   

Proteomes

UP000283053    UP000007151    UP000053268    UP000053240    UP000000803    UP000075901    + More
UP000037069    UP000001070    UP000008792    UP000008711    UP000007801    UP000002282    UP000009192    UP000092553    UP000007798    UP000019118    UP000001292    UP000192221    UP000268350    UP000008744    UP000007266    UP000001819    UP000092462    UP000095300    UP000030742    UP000075880    UP000183832    UP000095301    UP000075882    UP000092461    UP000036403    UP000075900    UP000075920    UP000075886    UP000092444    UP000000673    UP000075881    UP000030765    UP000005203    UP000069272    UP000075883    UP000007062    UP000075840    UP000076407    UP000075885    UP000242457    UP000075884    UP000076408    UP000075902    UP000075903    UP000008820    UP000078541    UP000000311    UP000008237    UP000002320    UP000075809    UP000069940    UP000249989    UP000078542    UP000078540    UP000005205    UP000078492    UP000002358    UP000076502    UP000079169    UP000279307    UP000009046    UP000027135    UP000091820    UP000000305    UP000007819    UP000245037   

PRIDE

X2JCY4    X2JGF5    Q24212   

Pfam

PF00928   Adap_comp_sub

Interpro

IPR028565   MHD        + More
IPR017110   Stonin       
IPR012320   SHD_dom       
IPR001392   Clathrin_mu       
IPR036168   AP2_Mu_C_sf       

SUPFAM

SSF49447   SSF49447       

ProteinModelPortal

A0A2H1V6T2   A0A3S2NX65   A0A212EWQ6   A0A194QIB5   A0A194RIQ2   A0A1Y1MPJ5   + More
X2JCY4   X2JGF5   Q24212   A0A182SGF7   A0A0L0BU69   A0A0K8WA07   W8AEC2   A0A034WMA2   A0A0A1X3C8   B4JLH6   B4M3M6   B3NY92   B3MYJ3   B4PZM5   B4L401   A0A0M4EVJ5   B4MSS6   N6U810   B4IKP5   A0A1W4WCJ6   A0A3B0J8V3   B4GWD9   D2A1F7   B5DLN0   A0A1B0D2X0   A0A1I8PN02   U4UFG2   T1PKR8   A0A182J3L8   A0A1J1HYA0   A0A1I8MUZ3   A0A1I8MUZ5   W4VRV0   A0A182KZX5   A0A1B0CGV6   A0A0J7L8U9   A0A182R284   A0A182W660   A0A182QCE1   A0A1B0FRL3   W5JUE1   A0A182K7X5   A0A084VVK9   A0A087ZWA6   A0A182FIN1   A0A182MHT2   Q7QF90   A0A182IAZ2   A0A182XK11   A0A182NZS1   A0A2A3ELD1   A0A182N0Q3   V9IKG4   A0A182YF06   A0A182U8U8   A0A182UT88   Q17PU7   A0A195ES00   E2AEE6   E2BHG5   A0A1Q3FS79   A0A1Q3FRT0   A0A1Q3FS00   A0A1Q3FRS6   B0WH25   A0A0C9R519   A0A1Q3FS90   A0A151X6Z5   A0A182GC24   A0A1B6FEF8   A0A195D3T9   A0A1B6C031   A0A151I2J0   A0A158NSC9   A0A151JQZ7   A0A1B6K569   K7J344   A0A154P528   A0A3Q0IWV0   A0A3L8DB86   A0A310SHC4   E0VIN2   A0A067QJF2   A0A1A9WPK6   A0A1B6MIS1   E9G2M0   A0A224XIQ3   A0A0A9YNJ1   A0A2S2N6S1   A0A2H8TMM0   X1WWA8   A0A2P8XWW0  

KEGG

101739970    K20067 stonin-1/2 | (RefSeq) protein stoned-B-like

GO

GO:0030100   GO:0006897   GO:0030131   GO:0006886   GO:0007268   GO:0048488   GO:0030139   GO:0099504   GO:0097110   GO:0048786   GO:1900242   GO:0008021   GO:0030054   GO:0048489   GO:0098793   GO:0036465   GO:0016020   GO:0015031   GO:0048788  

Subcellular location

Cytoplasm   Colocalizes with synaptic vesicle pools. Colocalizes with the endocytic network within synaptic boutons.   With evidence from 4 publications.
Cell junction   Colocalizes with synaptic vesicle pools. Colocalizes with the endocytic network within synaptic boutons.   With evidence from 4 publications.
Synapse   Colocalizes with synaptic vesicle pools. Colocalizes with the endocytic network within synaptic boutons.   With evidence from 4 publications.

Length:

123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00161

Exp number, first 60 AAs:

0.00161

Total prob of N-in:

0.08216

outside

1  -  123

 

 

Pi

48.04294

Theta

58.238999

Tajima's D

-1.006993

CLR

158.467749

CSRT

0.139293035348233

Interpretation

Uncertain