Gene

KWMTBOMO11067

Pre Gene Modal

BGIBMGA008308

Annotation

Connectin_[Papilio_machaon]

Location

Bomo_Chr18(-):11829234-11830516      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.792

CDS

ATGGAACAAGTCACCAAGTACCTGATCATCATAGCTTCCGTGATGACTGTTAAGCTTACTGTTACCGAAAGTAAGAATGATACCAAGCCCAGAATAGATAGAAGGTACTTTCACGTGCCCATGTTTGTTAACATCTGTGATATAGAAGACCGCAGATCCAAAGTGCATTGCTACTGCGATAACAACAAACCTAAAATGGCCACTCGAGCCGACTGCTGGGTGTTTGGAGGCGGAATAACTGAAGATGATCCAATATGGCCTAATTTTTCCTCACAAAGCGAATTGGAGCATCTTATCTTCAACGCTAGATCTGATGACGCTCTCACCTTTATTCCAGCGAAAGCCATTGTCAGATTAGATAAACTAAAACATGTAACCATACAGTTCGGTACTATCAAACGTATTCCACCGTACGCTTTCACAAATTCATCAACATTACGACAGATTGTATTGAAATCAACGAAGATAACGAAACTCGAGAAGCACGCTTTCTCGCGGCTGATGATGCTGTCAAACCTGAGTTTGGATGACAATCAAATAGAGGAATTGAAACGAGAATCGTTCTACAACCTACCGAATTTACACATACTCCACTTGTCGAACAATAACATTAGTTTGATACACGAAGGCTGCTTCAAACACCTGAACAACTTAATAGAATTAAGACTAGATTACAACTACATATCAGTAGTGACGCGGGAGATGTTCGAGGGACTGGAAAACCTCTCGAAATTGAACTTGAGACACAATAAGTTAACGATGATCGGAAATTTGGCGTTCACTGAACTGTGGGGCCTGAAAGAGCTGATGCTCGATAACAATGCTATAGAATACATATCGGAGAGAGCTTTTGGCGGTCTGGCTCAATTGAGAAAATTGTGGCTATCGGGGAATAGGTTGACGACATTTTACGAGGACGCTCTCGAAGATATGCGGAGTCTGGTAGTGTTGGATTTAAGAAATAATCTGTTGGAAACGATATCTTACGAGGCGATTCGACCACTGGTCGAGAATGTTAAATCAAGTTCGGCTGCAGTCTACTTAGAGGGTGAGTTGCAATACTCAAACTATAACTTATAA

Protein

MEQVTKYLIIIASVMTVKLTVTESKNDTKPRIDRRYFHVPMFVNICDIEDRRSKVHCYCDNNKPKMATRADCWVFGGGITEDDPIWPNFSSQSELEHLIFNARSDDALTFIPAKAIVRLDKLKHVTIQFGTIKRIPPYAFTNSSTLRQIVLKSTKITKLEKHAFSRLMMLSNLSLDDNQIEELKRESFYNLPNLHILHLSNNNISLIHEGCFKHLNNLIELRLDYNYISVVTREMFEGLENLSKLNLRHNKLTMIGNLAFTELWGLKELMLDNNAIEYISERAFGGLAQLRKLWLSGNRLTTFYEDALEDMRSLVVLDLRNNLLETISYEAIRPLVENVKSSSAAVYLEGELQYSNYNL

Uniprot

H9JFL1   A0A194QGQ1   A0A194RI53   A0A2H1X1V4   A0A2A4JNA6   A0A0L7LRI8   + More
A0A3S2NX82   A0A212F0E9   A0A2H1VKA7   A0A0L7LJM4   H9JGE2   A0A2Z5U6Q8   A0A212EWB6   A0A194RIU1   A0A194QI49   A0A3S2LY46   A0A212FJY7   A0A0L7LT00   A0A2A4JHU6   A0A194RII6   A0A2H1WRJ5   H9JGE5   A0A194QGR0   A0A0L7LCW6   A0A2H1X0G1   A0A2A4IZZ4   A0A3S2NQN6   A0A212EY84   A0A0L7KSB1   A0A2H1WWK7   H9JGC9   A0A194RI80   A0A194QGJ2   A0A3S2P0I5   A0A194QMB6   A0A2J7RGY8   D1ZZZ7   A0A2P8YXU8   A0A2P9A985   A0A0L7QK14   A0A1B6EUX6   A0A1B6IKB2   A0A154PP99   E0VLF1   A0A1Y1KVT1   A0A1Y1KSF1   A0A2R7VVV6   A0A067RE87   A0A336L4T9   T1HG84   A0A088AP31   A0A1Y1MUS6   A0A1Y1MUR2   A0A182SV66   Q177Q1   A0A194RMP0   A0A084VHE4   E9I8W9   B0X9P1   A0A0M8ZTC3   A0A336LLJ4   A0A182HFA7   E2A8P1   A0A232EZM6   A0A1B6CMN5   A0A182NCF0   A0A182XBB6   A0A182KLR3   Q7PYM2   Q16QN1   A0A182U569   A0A182I059   A0A182IMQ6   A0A182VJ73   A0A0P4W4I6   A0A182MKY2   A0A182VZ11   A0A195C8C6   A0A182R6D0   A0A182QL42   A0A182PKK5   A0A182FKT3   W5JPC6   A0A182K4I7   A0A182XVW5   A0A182KH31   A0A1A9WLG2   A0A182XVW4   A0A195F1M2   A0A0P4W729   A0A1I8QD93   A0A0A9X110   A0A1A9ZUD0   A0A1A9YCJ8   A0A1B0B0B4   A0A182M1F9   B0X035   A0A182PKK4   A0A195EJP1   A0A182UD95  

Pubmed

19121390    26354079    26227816    22118469    18362917    19820115    + More
29403074    20566863    28004739    24845553    17510324    24438588    21282665    26483478    20798317    28648823    20966253    12364791    14747013    17210077    20920257    23761445    25244985    25401762   

EMBL

BABH01002360    KQ458880    KPJ04594.1    KQ460154    KPJ17242.1    ODYU01012753    + More
SOQ59218.1    NWSH01001048    PCG72923.1    JTDY01000246    KOB78072.1    RSAL01000035    RVE51318.1    AGBW02011096    OWR47219.1    ODYU01002867    SOQ40882.1    JTDY01000864    KOB75625.1    BABH01033551    AP017473    BBB06699.1    AGBW02012044    OWR45761.1    KPJ17255.1    KPJ04605.1    RSAL01000117    RVE46822.1    AGBW02008193    OWR54044.1    JTDY01000194    KOB78356.1    NWSH01001336    PCG71627.1    KPJ17254.1    ODYU01010456    SOQ55582.1    BABH01033535    KPJ04604.1    JTDY01001654    KOB73240.1    ODYU01012486    SOQ58819.1    NWSH01004345    PCG65199.1    RSAL01000372    RVE42134.1    AGBW02011598    OWR46445.1    JTDY01006497    KOB65961.1    ODYU01011209    SOQ56804.1    BABH01033645    KPJ17267.1    KPJ04617.1    RSAL01000068    RVE49260.1    KPJ04616.1    NEVH01003750    PNF40092.1    KQ971338    EFA02447.2    PYGN01000295    PSN49068.1    LT717637    SIW61629.1    KQ414990    KOC58968.1    GECZ01028051    GECZ01022424    GECZ01015237    GECZ01002416    JAS41718.1    JAS47345.1    JAS54532.1    JAS67353.1    GECU01020353    JAS87353.1    KQ435007    KZC13567.1    DS235271    EEB14207.1    GEZM01076966    GEZM01076965    GEZM01076964    GEZM01076963    JAV63506.1    GEZM01076967    GEZM01076962    JAV63508.1    KK854111    PTY11469.1    KK852559    KDR21353.1    UFQS01001597    UFQT01001597    SSX11539.1    SSX31106.1    ACPB03023550    GEZM01020065    GEZM01020063    JAV89424.1    GEZM01020064    JAV89423.1    CH477372    EAT42413.1    KPJ17266.1    ATLV01013162    KE524842    KFB37388.1    GL761662    EFZ22980.1    DS232543    EDS43243.1    KQ435859    KOX70547.1    UFQT01000045    SSX18826.1    JXUM01036703    JXUM01036704    JXUM01036705    KQ561103    KXJ79693.1    GL437657    EFN70198.1    NNAY01001478    OXU23825.1    GEDC01022564    GEDC01019421    GEDC01017721    JAS14734.1    JAS17877.1    JAS19577.1    AAAB01008987    EAA01440.5    CH477742    EAT36704.1    APCN01002046    GDRN01085066    JAI61404.1    AXCM01006762    KQ978081    KYM97087.1    AXCN02000019    ADMH02000940    ETN64619.1    KQ981856    KYN34475.1    GDRN01085074    JAI61403.1    GBHO01029960    JAG13644.1    JXJN01006686    AXCM01004687    DS232227    EDS37910.1    KQ978782    KYN28470.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000037510    UP000283053    + More
UP000007151    UP000235965    UP000007266    UP000245037    UP000053825    UP000076502    UP000009046    UP000027135    UP000015103    UP000005203    UP000075901    UP000008820    UP000030765    UP000002320    UP000053105    UP000069940    UP000249989    UP000000311    UP000215335    UP000075884    UP000076407    UP000075882    UP000007062    UP000075902    UP000075840    UP000075880    UP000075903    UP000075883    UP000075920    UP000078542    UP000075900    UP000075886    UP000075885    UP000069272    UP000000673    UP000075881    UP000076408    UP000091820    UP000078541    UP000095300    UP000092445    UP000092443    UP000092460    UP000078492   

PRIDE

H9JFL1    H9JGE2    H9JGE5    H9JGC9   

Pfam

PF13855   LRR_8        + More
PF00560   LRR_1
PF13306   LRR_5

Interpro

IPR032675   LRR_dom_sf        + More
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JFL1   A0A194QGQ1   A0A194RI53   A0A2H1X1V4   A0A2A4JNA6   A0A0L7LRI8   + More
A0A3S2NX82   A0A212F0E9   A0A2H1VKA7   A0A0L7LJM4   H9JGE2   A0A2Z5U6Q8   A0A212EWB6   A0A194RIU1   A0A194QI49   A0A3S2LY46   A0A212FJY7   A0A0L7LT00   A0A2A4JHU6   A0A194RII6   A0A2H1WRJ5   H9JGE5   A0A194QGR0   A0A0L7LCW6   A0A2H1X0G1   A0A2A4IZZ4   A0A3S2NQN6   A0A212EY84   A0A0L7KSB1   A0A2H1WWK7   H9JGC9   A0A194RI80   A0A194QGJ2   A0A3S2P0I5   A0A194QMB6   A0A2J7RGY8   D1ZZZ7   A0A2P8YXU8   A0A2P9A985   A0A0L7QK14   A0A1B6EUX6   A0A1B6IKB2   A0A154PP99   E0VLF1   A0A1Y1KVT1   A0A1Y1KSF1   A0A2R7VVV6   A0A067RE87   A0A336L4T9   T1HG84   A0A088AP31   A0A1Y1MUS6   A0A1Y1MUR2   A0A182SV66   Q177Q1   A0A194RMP0   A0A084VHE4   E9I8W9   B0X9P1   A0A0M8ZTC3   A0A336LLJ4   A0A182HFA7   E2A8P1   A0A232EZM6   A0A1B6CMN5   A0A182NCF0   A0A182XBB6   A0A182KLR3   Q7PYM2   Q16QN1   A0A182U569   A0A182I059   A0A182IMQ6   A0A182VJ73   A0A0P4W4I6   A0A182MKY2   A0A182VZ11   A0A195C8C6   A0A182R6D0   A0A182QL42   A0A182PKK5   A0A182FKT3   W5JPC6   A0A182K4I7   A0A182XVW5   A0A182KH31   A0A1A9WLG2   A0A182XVW4   A0A195F1M2   A0A0P4W729   A0A1I8QD93   A0A0A9X110   A0A1A9ZUD0   A0A1A9YCJ8   A0A1B0B0B4   A0A182M1F9   B0X035   A0A182PKK4   A0A195EJP1   A0A182UD95  

PDB

4QXF     E-value=9.02951e-18,     Score=221

KEGG

101739410    no KO assigned | (RefSeq) connectin-like

GO

GO:0016021   GO:0005515   GO:0006355   GO:0043565   GO:0003676   GO:0005543   GO:0042626   GO:0016887   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 24,         Likelihood:  0.602034

 

 

Length:

359

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.30465

Exp number, first 60 AAs:

0.30351

Total prob of N-in:

0.03483

outside

1  -  359

 

 

Pi

239.339792

Theta

196.083271

Tajima's D

0.691296

CLR

0

CSRT

0.567521623918804

Interpretation

Uncertain