Gene

KWMTBOMO11066

Annotation

PREDICTED:_interference_hedgehog-like_[Papilio_xuthus]

Location

Bomo_Chr18(+):11598805-11624200      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.071 Nuclear   Reliability : 1.421

CDS

ATGAACTTCATAAAGTATCCAGAATCCGTAACGGCTCCTGTCGGTGACTCGGTAACCTTCGAGTGTGAAGTGGACGTACCGGCTGAGAAGCTGATTTGGCGAACGCGACCCGTTGACGGCCCTGAAGGTATCTGGGAGAAAGTGGTGACAGGCAAGGAAAAATCCACTGAAGTCTCAAGTCGTCTGGCCGTCGAAGTGAAAGACAATACACAAACTGCTTTTTATCAGTGCGTAGTATTGTACGGTTCAGTGATATTGGTATCGGTACCAGCAAAGCTGAGTGTAGCGAGCCTGGATTTAAGTAAGAACAGTCTTGAGAAACGCGTCATTACTGCACCATTGCATAATACTGTGGTTCTTCACTGCAAACAACCGCTGTCCGATCCACCCGCTGACCTGACCTGGTGGAAAGAGAGTACAAAAGGTTCTAAGAAACCGATAGAAACTCCTCATGGTGTACTGGTGATCCACAATACGTCGTTATCTGACAGCGGCACATACGGCTGCAAGGCCACGAACAAACTCAGCTTGAAAGCTGCGGATCTACCCGAGAAGACTGTGCTGAAGATACAGCGTGACGATACCGGAGAAGTCAGATTCGTGGAGTCGGAAGATTATGTAGGGGTCAAAGATAATGATGTGCTAACGATGCCAGTAAAGCCGAGAGGAACTTTAAGGTTGTATTGCGGAGCGGTCGGAGTTCCTCCTCCGAAGATCACTTGGACCAGGGAAGGAAGAACGCCGCTGCCAAAAAGACACGATCATGCGATACTTAATATTGCGAACTTTACCGCTGCCGATGAAGGTATTTATTCGTGTTCAGCAAACGGCATACGTAGGTCTTGGAAGGTGGTGGTGTTGCAGCCGCCCCGGTGGGAGGGCGTCGCCGCCAACGCCAATGACACGGAGGGCAAGGGGGTCAGTATTAGCTGCGGCAACGCCGTCGGGTACCCCCAGCCCGAGGTCTACTGGGTGTTGAATGGAGAACGCGTCAGCACCGGTACCGGAGTCACCGCTACAGATTCAGACCTGAATATCGAGCACCTAGAGAAGAAGCACGCCGGGATAGTTCAGTGCTTCGCGTGCAACAAGCTCGGGTGTTCGTTCCTGGCGGCCATGCTCACTGTCGTTCCGCTGCAGATATCGGACCAGGATTATTCAATGGAAACGCCGAAAACTTTGCAATCATCATCGCAACTTCCTAAACGTCATAACAGGAAGAATTCAAGGAAGCAGAAAGTTGTACCAGTGATGGTGCCACCATCGCGTCCTAACGTGACCCGCCTGTCCGACCAGAGTGTGATGCTGTCCTGGACACAGCCACGGGAAGGACTTCCCATACTATTTTTTAAGGTGCAGTACAAAGAAGCGACGAATACGAGCAAAGAGTGGAATACATTGACGCAAGAAATCCCTCCCCACATACATTCTTATGAAGTCGACGGTCTCACACCGGACAAGTACTATAGATTTCGAATAGCAGCGGTGTACTCGAACCAAGACAACAATCAGGGTCGGAGCAGTACGCGTTTCTTCCTGCAGAGCGGCGAGTACAAAGGGCCCAGTGCACCTGTACTCACCAAAGTTGAAGCCACCTCGCCTCACAGCCTACAGTCAGATTGGACGGTGGCAAAGACCCAGAAGCTATCCAACGCGCCGACATCGACGAGTCCAGCGCCGGTGTCGGAGGCGGGCGCGACCGGTGCGGGGGGCGCGGGGGGCGCGGGCGTGGCGTTGGGCGCGGCGCTGGGCGCGGGCGGCGTGCTGGTCGCCGCGCTGTTCGCCGCGCTCATGTGTCGGCGAGCCAGGAGACTGCCTAAACACAAAGAGAACGCTTCATCATTGGAAGGCGGTGGGGCTAATGCTTACATTCCCGCCAAAGTTCCGATCACTATAACGTCAAACCCTATGCATTCAGAGGGATCAGACCCTGGAGTAGAAATGTCATTTCTACACAACAATAACACCGGGAACAATGATGACACACTAACGCATTCGAGGAAAAACGGACCGGCACCGCGGCAATACGTATGA

Protein

MNFIKYPESVTAPVGDSVTFECEVDVPAEKLIWRTRPVDGPEGIWEKVVTGKEKSTEVSSRLAVEVKDNTQTAFYQCVVLYGSVILVSVPAKLSVASLDLSKNSLEKRVITAPLHNTVVLHCKQPLSDPPADLTWWKESTKGSKKPIETPHGVLVIHNTSLSDSGTYGCKATNKLSLKAADLPEKTVLKIQRDDTGEVRFVESEDYVGVKDNDVLTMPVKPRGTLRLYCGAVGVPPPKITWTREGRTPLPKRHDHAILNIANFTAADEGIYSCSANGIRRSWKVVVLQPPRWEGVAANANDTEGKGVSISCGNAVGYPQPEVYWVLNGERVSTGTGVTATDSDLNIEHLEKKHAGIVQCFACNKLGCSFLAAMLTVVPLQISDQDYSMETPKTLQSSSQLPKRHNRKNSRKQKVVPVMVPPSRPNVTRLSDQSVMLSWTQPREGLPILFFKVQYKEATNTSKEWNTLTQEIPPHIHSYEVDGLTPDKYYRFRIAAVYSNQDNNQGRSSTRFFLQSGEYKGPSAPVLTKVEATSPHSLQSDWTVAKTQKLSNAPTSTSPAPVSEAGATGAGGAGGAGVALGAALGAGGVLVAALFAALMCRRARRLPKHKENASSLEGGGANAYIPAKVPITITSNPMHSEGSDPGVEMSFLHNNNTGNNDDTLTHSRKNGPAPRQYV

Uniprot

H9JGA5   A0A2A4JM33   A0A194PGD1   A0A3S2LDF3   A0A2P8XQX9   A0A067RES3   + More
T1IAC2   A0A1B6LUZ6   W8AFL0   A0A146LCY4   A0A0A9X973   A0A0A9XEP1   A0A0A9XQU2   A0A146KQA7   A0A0A9XNK8   A0A1B6HKT6   A0A336MD34   Q16XM4   A0A1B6JHU6   A0A336MI97   A0A0K8VSK0   A0A0M8ZWB8   A0A2R7WTY1   A0A0C9R944   A0A232EVS6   A0A0C9QTS6   A0A0C9R7T4   A0A0K8VCL6   A0A0K8UWM7   A0A034W5J6   A0A182N460   A0A088A238   E0VM31   K7J263   A0A1S4EEV9   A0A182FQQ4   W5J2M9   A0A182H9K9   A0A182QQI3   A0A182PRH7   E2A7S0   A0A2A3ELG6   A0A182MA69   A0A2A3EMX8   A0A1L8DJX5   B4NDH8   A0A1B6CKP4   A0A1L8DK43   A0A182R699   A0A0M5J0T5   A0A1B6F257   B4L1Y0   A0A2S2QWE7   A0A182VHX3   Q7PUH1   E9IFN3   A0A0J7L9R4   A0A0L7QV73   C0PV50   A0A026VTY3   A0A2S2QVB5   A0A182YAS4   A0A1I8PA29   B4M8A4   E2BPT6   Q95R27   Q9W4Y6   A0A3B0K4R5   B4R3I7   A8JUV7   B4Q0Z9   A0A0R1EG90   A0A3B0K7A8   A0A3B0K938   B4I9V8   A0A0L0CJL9   A0A3L8DBY2   A0A195BYY2   A0A1B0CMF9   B4JKX7   A0A158NS40   A0A195BCB5   A0A1B0A137   B5DNW7   A0A1Y1NNU9   A0A1A9VWU9   A0A1Y1NJ26   A0A195FW39   B3MYV9   A0A1Y1NJS2   A0A1A9XA40   A0A0R3P221   A0A1Y1NN14   A0A0N8NZE9   A0A1B0AMZ7   A0A195DD05   A0A0Q5T4D8  

Pubmed

19121390    26354079    29403074    24845553    24495485    26823975    + More
25401762    17510324    28648823    25348373    20566863    20075255    20920257    23761445    26483478    20798317    17994087    12364791    21282665    24508170    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26108605    30249741    21347285    15632085    28004739    23185243   

EMBL

BABH01002335    NWSH01001132    PCG72460.1    KQ459604    KPI92446.1    RSAL01000035    + More
RVE51319.1    PYGN01001517    PSN34324.1    KK852508    KDR22391.1    ACPB03010646    GEBQ01012474    JAT27503.1    GAMC01019520    JAB87035.1    GDHC01013623    JAQ05006.1    GBHO01026317    JAG17287.1    GBHO01026316    JAG17288.1    GBHO01021275    JAG22329.1    GDHC01020400    JAP98228.1    GBHO01021282    JAG22322.1    GECU01032413    JAS75293.1    UFQT01000792    SSX27261.1    CH477536    EAT39367.1    GECU01008875    JAS98831.1    UFQS01001347    UFQT01001347    SSX10448.1    SSX30134.1    GDHF01010501    JAI41813.1    KQ435821    KOX72440.1    KK855540    PTY23032.1    GBYB01012899    JAG82666.1    NNAY01001949    OXU22478.1    GBYB01004092    JAG73859.1    GBYB01004090    JAG73857.1    GDHF01015686    GDHF01000682    JAI36628.1    JAI51632.1    GDHF01021589    JAI30725.1    GAKP01009557    JAC49395.1    DS235286    EEB14437.1    ADMH02002181    ETN58011.1    JXUM01030734    JXUM01030735    JXUM01030736    KQ560894    KXJ80447.1    AXCN02000026    GL437382    EFN70538.1    KZ288215    PBC32557.1    AXCM01011906    PBC32556.1    GFDF01007363    JAV06721.1    CH964239    EDW82884.2    GEDC01023316    GEDC01005317    JAS13982.1    JAS31981.1    GFDF01007364    JAV06720.1    CP012528    ALC48424.1    GECZ01025430    JAS44339.1    CH933810    EDW07701.2    GGMS01012886    MBY82089.1    AAAB01008987    EAA01552.6    GL762880    EFZ20623.1    LBMM01000111    KMR04901.1    KQ414727    KOC62464.1    BT072906    ACN76538.1    KK107906    EZA47263.1    GGMS01012400    MBY81603.1    CH940653    EDW62380.2    GL449658    EFN82287.1    AY061833    AAL27644.1    AE014298    BT044213    AAF45784.2    ACH92278.1    ADV37624.1    ADV37625.1    OUUW01000018    SPP89194.1    CM000366    EDX16939.1    ABW09329.3    CM000162    EDX01366.1    KRK06121.1    KRK06122.1    SPP89193.1    SPP89192.1    CH480825    EDW43989.1    JRES01000394    KNC31684.1    QOIP01000010    RLU17652.1    KQ978457    KYM93822.1    AJWK01018665    AJWK01018666    AJWK01018667    CH916370    EDW00230.1    ADTU01024463    KQ976528    KYM81862.1    CH379065    EDY73219.1    GEZM01001451    JAV97757.1    GEZM01001449    JAV97759.1    KQ981208    KYN44658.1    CH902632    EDV32803.2    GEZM01001450    JAV97758.1    KRT07256.1    KRT07257.1    KRT07258.1    KRT07259.1    GEZM01001452    JAV97756.1    KPU74132.1    JXJN01000671    KQ980989    KYN10712.1    CH954183    KQS26039.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000245037    UP000027135    + More
UP000015103    UP000008820    UP000053105    UP000215335    UP000075884    UP000005203    UP000009046    UP000002358    UP000079169    UP000069272    UP000000673    UP000069940    UP000249989    UP000075886    UP000075885    UP000000311    UP000242457    UP000075883    UP000007798    UP000075900    UP000092553    UP000009192    UP000075903    UP000007062    UP000036403    UP000053825    UP000053097    UP000076408    UP000095300    UP000008792    UP000008237    UP000000803    UP000268350    UP000000304    UP000002282    UP000001292    UP000037069    UP000279307    UP000078542    UP000092461    UP000001070    UP000005205    UP000078540    UP000092445    UP000001819    UP000078200    UP000078541    UP000007801    UP000092443    UP000092460    UP000078492    UP000008711   

PRIDE

H9JGA5    Q95R27    Q9W4Y6   

Pfam

PF00041   fn3        + More
PF07679   I-set
PF13895   Ig_2
PF00250   Forkhead

Interpro

IPR036116   FN3_sf        + More
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR030456   TF_fork_head_CS_2       
IPR001766   Fork_head_dom       
IPR018122   TF_fork_head_CS_1       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR029063   SAM-dependent_MTases       
IPR001660   SAM       
IPR013761   SAM/pointed_sf       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       
SSF46785   SSF46785       
SSF53335   SSF53335       
SSF47769   SSF47769       

Gene 3D

2.60.40.10     1.10.10.10     1.10.150.50    

CDD

cd00063  FN3
cd00059  FH

ProteinModelPortal

H9JGA5   A0A2A4JM33   A0A194PGD1   A0A3S2LDF3   A0A2P8XQX9   A0A067RES3   + More
T1IAC2   A0A1B6LUZ6   W8AFL0   A0A146LCY4   A0A0A9X973   A0A0A9XEP1   A0A0A9XQU2   A0A146KQA7   A0A0A9XNK8   A0A1B6HKT6   A0A336MD34   Q16XM4   A0A1B6JHU6   A0A336MI97   A0A0K8VSK0   A0A0M8ZWB8   A0A2R7WTY1   A0A0C9R944   A0A232EVS6   A0A0C9QTS6   A0A0C9R7T4   A0A0K8VCL6   A0A0K8UWM7   A0A034W5J6   A0A182N460   A0A088A238   E0VM31   K7J263   A0A1S4EEV9   A0A182FQQ4   W5J2M9   A0A182H9K9   A0A182QQI3   A0A182PRH7   E2A7S0   A0A2A3ELG6   A0A182MA69   A0A2A3EMX8   A0A1L8DJX5   B4NDH8   A0A1B6CKP4   A0A1L8DK43   A0A182R699   A0A0M5J0T5   A0A1B6F257   B4L1Y0   A0A2S2QWE7   A0A182VHX3   Q7PUH1   E9IFN3   A0A0J7L9R4   A0A0L7QV73   C0PV50   A0A026VTY3   A0A2S2QVB5   A0A182YAS4   A0A1I8PA29   B4M8A4   E2BPT6   Q95R27   Q9W4Y6   A0A3B0K4R5   B4R3I7   A8JUV7   B4Q0Z9   A0A0R1EG90   A0A3B0K7A8   A0A3B0K938   B4I9V8   A0A0L0CJL9   A0A3L8DBY2   A0A195BYY2   A0A1B0CMF9   B4JKX7   A0A158NS40   A0A195BCB5   A0A1B0A137   B5DNW7   A0A1Y1NNU9   A0A1A9VWU9   A0A1Y1NJ26   A0A195FW39   B3MYV9   A0A1Y1NJS2   A0A1A9XA40   A0A0R3P221   A0A1Y1NN14   A0A0N8NZE9   A0A1B0AMZ7   A0A195DD05   A0A0Q5T4D8  

PDB

2IBB     E-value=2.00901e-19,     Score=238

KEGG

101739270    K20245 brother of ihog | (RefSeq) interference hedgehog-like

PATHWAY

04341    Hedgehog signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0043565   GO:0005634   GO:0003700   GO:0097108   GO:0001751   GO:0035017   GO:0035222   GO:0015026   GO:0009986   GO:0007224   GO:0071694   GO:0035230   GO:0005886   GO:0016301   GO:0048749   GO:0005515   GO:0006355   GO:0003676   GO:0005543   GO:0042626   GO:0016887   GO:0005622   GO:0006810   GO:0003824  

Subcellular location

Nucleus  

Length:

677

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.54519

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08112

outside

1  -  574

TMhelix

575  -  597

inside

598  -  677

 

 

Pi

175.872566

Theta

160.271968

Tajima's D

0.352819

CLR

101.157436

CSRT

0.474976251187441

Interpretation

Uncertain