Gene

KWMTBOMO11065

Annotation

PREDICTED:_uncharacterized_protein_LOC103311346_[Acyrthosiphon_pisum]

Location

Bomo_Chr18(-):11592818-11595624      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.007

CDS

ATGGTCACAGTTGACGTACGCCCGGACGAGATCACACGTAATCCTACCTTCGAGTCTAGCACTGCAGCCTCCACTAATGCGTATGTGGGCTACAGTCGCTCGGTAGTTCTGTTGGGTACTTGTGTAGTTCGCGTTCGTCATCCTCGCAGTACTAATCAATCATTTCTTGTACGTGCGTTGATTGATAGTGGTGCTCAAGATTGTTTCATTACCAAGTCATGTTGTCAACGTTTGGGCTTACCATTACGTCGCTGTCCATTAGCCGTAGTTGGTCTAGGTCAAAATGCTGTACATCACGTGACTGGAGTTACTTCTTGCACTGTACTTTCTCGTACTTCAGAAAATCCTCATTTCAACATTAATCCTATCGTAGTAAATACTATAACGAGTAAAATGCCTGCTACAAACTTACCTACTAATCTTCGTGAATCTTTTAAACATCTGGTCCTCGCTGATGAGAATTTTGATAAACCATCAAATGTAGATTTACTACTCGGCGCAGAACTGTTCCATAGTATTTATGACGGTCAACGCGTTCAGCCCAGTCATGATCTACCGGTAGCTTTACACAGCGTATTTGGTTGGGTCATCACCGGCAAACTTGATACAAACCATTTACCTCCGCCAACAATATCTTCTCTCTTAGCATCCACACGTTCTCTAGACGAGGGACTCAAGCGATTCTGGGAGATCGAAGAACCTCCAAGTCAGGTTATCTTAAACCCTGAAGATATTAAATGTGAACAAATGTACTCAAATCTAACGTATCGTAATCCCGACGGCAGATATGTTGTACCTATGCTTCTCAAAGAACCTATCAGTCAACTAGGCGATTCTTTCAACCAATCTTTCTCTCGGCTCGTTAACCTAGAACGACGCCTTAATCGAAACTTAGAGTTGAAAAAAGAGTACACCGCCTTTATGCGCGAATACAAGCTGTTAGGGCATATGGAGCCTAGCGCTGACTCGAATAAAATCGGGCAGTATATAATTCCTCATCATTGTGTCATTCGCCCGGAAAGTACAACGACTAAACTTAGGGTTGTATTCGATGCTAGCGCCAAAACTACCAATGGCAAATCTCTTAACGATCTTGTATATACTGGTCCAAAACTTCAAAACGATATAGGAGATATACTTACAAAATTTCGGTTGCATGCTGTTGTTTTTACTGCCGACATCAGTAAGATGTATCGAAACATCGTACTTAGGCCAGAAGACCGAAAATGGCAGCATATACTTTGGCGCGATTCTCCTTCTGATCCTGTAACTGAGTATGAGCTGAAAACGGTAACTTACGGGGTTACGAGTTCCCCTTATCTGGCAATACGTACTCTGCATCAATTAGCCTCTGACTACGAAAAAGAGTGGCCCTTAGCTGCTGCTAGTCTTCGTCATGATACTTTCATGGATGACATCACTGTTGGTGCTACATCTATTGAAACTGCACTGAAACATAAAGAAGAGTTAATACAAATGTTAGCGCGTGCTAAGTTCGAATTACGTAAATGGAGTAGCAACTCACCTGAATTCCTCACCCAGATACCAACGGAACATTGTCAGGTTCCAAAAACATTTTGTGATGAAAAACAAAAACAAAGTATCAAGATTCTTGGAGTCCGATGGGATCCAGCTGATGATAACTTCACTTATGCTTTATCAGAACTCACTCCAGGGAATACAAAACGTTCTATTCTATCAAACGTCGCCAGAATTTATGATCCACTCGGATGGTTAGCCCCAATGGTTCTAATAGCTAAGCTTACCTTACAAGAACTATGGCGCCTTCAGCTTGACTGGGATGAAACTGTACCGTCAGATATGTTGTCTCAGTGGCATCTATTTACATCCGAGTTTCACTACCTGAAGGATATTAAAATTCCTCGACTAATTGTACCTCTTCATTCAAAATCATACGAACTTGTAGGTTTTTGTGATGGATCTACCAAGGCTTATGGTTGTTCTGTGTACTTACGTATCACTACCGACACTGAAATTACATCTCACTTGCTTATTGCAAAATCTAAAGTAGCTCCATTAAAAGTTCTTACTGTCAACCGATTGGAGCTATGTAGTGCTGTATTGCTAGCAAAAGTATTGAAGCATATTAGTAATTTACTAAATGAAACTCAAACCTCAAACATAACAATTTCAAAGATATGGGCATTCACTGATAGCTCAACTGTACTATCATGGCTGCAAACAGCACCTCATCGTCTTAAAACTTTCGTTGCACACCGTGTCGTGAAGCTGTTAGATAATTTGTCTGTCGAAAATTGGTATCACGTGTCAACGTATGATAATCCAGCAGATTACTGCAGTCGTGGTCTTACCTGCTCTCAACTTGTGGCTTGTTCCACTTGGTGGACAGGACCCAAATGGATAGTCTCGAATTCTTCTACATGGCCGGTGTCTGAAAAATTACCTTATTTAAAGGAATTAGCCGAAAACTAG

Protein

MVTVDVRPDEITRNPTFESSTAASTNAYVGYSRSVVLLGTCVVRVRHPRSTNQSFLVRALIDSGAQDCFITKSCCQRLGLPLRRCPLAVVGLGQNAVHHVTGVTSCTVLSRTSENPHFNINPIVVNTITSKMPATNLPTNLRESFKHLVLADENFDKPSNVDLLLGAELFHSIYDGQRVQPSHDLPVALHSVFGWVITGKLDTNHLPPPTISSLLASTRSLDEGLKRFWEIEEPPSQVILNPEDIKCEQMYSNLTYRNPDGRYVVPMLLKEPISQLGDSFNQSFSRLVNLERRLNRNLELKKEYTAFMREYKLLGHMEPSADSNKIGQYIIPHHCVIRPESTTTKLRVVFDASAKTTNGKSLNDLVYTGPKLQNDIGDILTKFRLHAVVFTADISKMYRNIVLRPEDRKWQHILWRDSPSDPVTEYELKTVTYGVTSSPYLAIRTLHQLASDYEKEWPLAAASLRHDTFMDDITVGATSIETALKHKEELIQMLARAKFELRKWSSNSPEFLTQIPTEHCQVPKTFCDEKQKQSIKILGVRWDPADDNFTYALSELTPGNTKRSILSNVARIYDPLGWLAPMVLIAKLTLQELWRLQLDWDETVPSDMLSQWHLFTSEFHYLKDIKIPRLIVPLHSKSYELVGFCDGSTKAYGCSVYLRITTDTEITSHLLIAKSKVAPLKVLTVNRLELCSAVLLAKVLKHISNLLNETQTSNITISKIWAFTDSSTVLSWLQTAPHRLKTFVAHRVVKLLDNLSVENWYHVSTYDNPADYCSRGLTCSQLVACSTWWTGPKWIVSNSSTWPVSEKLPYLKELAEN

Similarity

Belongs to the synaptobrevin family.

Uniprot

A0A1U8N896   V5GHM7   A0A0A9Z001   X1WVF9   A0A0K8SX96   A0A224XGH3   + More
A0A2S2PNC2   A0A2S2PM34   A0A0A9VYL4   A0A0A9VSF7   X1WY64   A0A1B6GGX5   A0A0A9WAJ3   A0A437AV42   A0A0A9WE49   X1WRA3   A0A0J7K7U0   A0A0A9WBL7   J9JVD6   X1XET3   X1WY95   J9K351   A0A1B6KIX6   A0A1B6LLT3   A0A0A9ZJJ6   A0A1B6MT91   A0A2S2NPW7   A0A1B6LKM8   X1XU26   A0A146KZL4   A0A0A9ZG52   X1X412   J9JNP4   J9JUM9   A0A0A9ZHU0   A0A1Y1LM33   A0A2S2PI15   A0A0A9W8L8   X1XU46   A0A0A9Z275   A0A1Y1KMX0   A0A146L5E8   A0A2S2NIB3   A0A1Y1LIG5   W8C1U1   A0A0A9X3X8   J9L9H5   A0A023EYR9   A0A023F0C4   A0A146L7F7   A0A146LBU6   J9LPA9   J9JVZ7   A0A2S2QVB8   A0A2S2NNC8   J9JUK4   J9KD60   X1WYQ7   A0A0A9WP39   A0A2S2PBK9   A0A146LEU7   A0A2S2QDN7   A0A2S2P1X6   A0A023F096   A0A2S2PLW6   A0A2S2NBR8   A0A2S2P963   A0A1B6KZV2   A0A0A9WH19   A0A146KRI6   A0A1B6MUZ9   A0A2S2NCY5   J9LIW1   A0A146M9H0   A0A0J7KDN6   A0A2S2NHU0   A0A2S2PC00   A0A2S2P2U4   J9JLG6   X1X8C2   A0A2S2NWE9   X1XTX7   A0A0A9YNG0   A0A0A9YYJ5   A0A0A9X2P1   A0A2S2QLL5   X1WYQ8   A0A0A9WW84   X1WZY4   A0A1U8N859   A0A2S2NZ22   W8ANH7   J9K0A1   J9L3C9   A0A0A9X8U7   A0A0A9WWW3   A0A2S2R2J0   A0A0A9WHD6   J9M7R2   X1X5R1  

Pubmed

25893780    25401762    26823975    28004739    24495485    25474469    + More

EMBL

GALX01004947    JAB63519.1    GBHO01006408    JAG37196.1    ABLF02026240    ABLF02055027    + More
GBRD01007977    JAG57844.1    GFTR01008866    JAW07560.1    GGMR01018294    MBY30913.1    GGMR01017890    MBY30509.1    GBHO01044316    JAF99287.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    ABLF02012239    ABLF02012241    ABLF02017372    ABLF02042178    ABLF02066436    GECZ01008071    JAS61698.1    GBHO01038800    JAG04804.1    RSAL01000392    RVE41994.1    GBHO01038805    GBHO01038804    GBHO01038801    JAG04799.1    JAG04800.1    JAG04803.1    ABLF02066034    LBMM01012238    KMQ86334.1    GBHO01039691    GBHO01039690    JAG03913.1    JAG03914.1    ABLF02008594    ABLF02041762    ABLF02030854    ABLF02067347    ABLF02025193    GEBQ01028569    JAT11408.1    GEBQ01015458    JAT24519.1    GBHO01000059    JAG43545.1    GEBQ01000825    JAT39152.1    GGMR01006575    MBY19194.1    GEBQ01015737    JAT24240.1    ABLF02001506    ABLF02008029    ABLF02035899    ABLF02037719    ABLF02046327    ABLF02064627    GDHC01018192    JAQ00437.1    GBHO01000060    JAG43544.1    ABLF02008635    ABLF02023121    ABLF02065930    ABLF02065931    ABLF02005684    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GBHO01000061    JAG43543.1    GEZM01054766    GEZM01054765    JAV73410.1    GGMR01016460    MBY29079.1    GBHO01039838    GBHO01006034    JAG03766.1    JAG37570.1    ABLF02003339    ABLF02058001    GBHO01007689    JAG35915.1    GEZM01085145    GEZM01085143    JAV60187.1    GDHC01016272    JAQ02357.1    GGMR01003897    MBY16516.1    JAV73413.1    GAMC01006864    JAB99691.1    GBHO01030122    GBHO01030121    GBHO01030120    GBHO01030116    JAG13482.1    JAG13483.1    JAG13484.1    JAG13488.1    ABLF02008636    GBBI01004410    JAC14302.1    GBBI01004408    JAC14304.1    GDHC01014268    JAQ04361.1    GDHC01014057    JAQ04572.1    ABLF02035780    ABLF02015138    GGMS01012504    MBY81707.1    GGMR01005823    MBY18442.1    ABLF02039606    ABLF02041863    ABLF02041670    GBHO01034065    GBHO01034061    JAG09539.1    JAG09543.1    GGMR01014165    MBY26784.1    GDHC01011948    JAQ06681.1    GGMS01006636    MBY75839.1    GGMR01010723    MBY23342.1    GBBI01004276    JAC14436.1    GGMR01017784    MBY30403.1    GGMR01002024    MBY14643.1    GGMR01013370    MBY25989.1    GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    GBHO01037781    JAG05823.1    GDHC01019528    JAP99100.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    GGMR01002421    MBY15040.1    ABLF02003736    ABLF02008292    ABLF02008294    ABLF02046909    ABLF02052378    GDHC01002235    JAQ16394.1    LBMM01009202    KMQ88311.1    GGMR01003717    MBY16336.1    GGMR01014351    MBY26970.1    GGMR01011131    MBY23750.1    ABLF02030698    ABLF02030705    ABLF02030709    GGMR01008932    GGMR01010920    MBY21551.1    MBY23539.1    ABLF02006304    ABLF02036268    GBHO01027036    GBHO01010996    GBHO01010995    GBHO01010993    GBHO01010991    JAG16568.1    JAG32608.1    JAG32609.1    JAG32611.1    JAG32613.1    GBHO01012499    GBHO01012498    GBHO01012497    GBHO01007479    GBHO01007451    GBHO01007450    JAG31105.1    JAG31106.1    JAG31107.1    JAG36125.1    JAG36153.1    JAG36154.1    GBHO01028617    JAG14987.1    GGMS01009443    MBY78646.1    ABLF02028666    ABLF02066713    GBHO01031928    GBHO01031926    JAG11676.1    JAG11678.1    ABLF02036131    ABLF02041527    ABLF02064049    GGMR01009860    MBY22479.1    GAMC01020552    JAB86003.1    ABLF02067195    ABLF02041650    GBHO01028371    GBHO01028370    JAG15233.1    JAG15234.1    GBHO01034255    GBHO01034254    JAG09349.1    JAG09350.1    GGMS01014951    MBY84154.1    GBHO01037676    JAG05928.1    ABLF02005251    ABLF02055296    ABLF02006784   

Proteomes

UP000189702    UP000007819    UP000283053    UP000036403   

Pfam

PF18701   DUF5641        + More
PF05380   Peptidase_A17
PF03564   DUF1759
PF05585   DUF1758
PF17921   Integrase_H2C2
PF00665   rve
PF00078   RVT_1
PF13774   Longin

Interpro

IPR001584   Integrase_cat-core        + More
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR011012   Longin-like_dom_sf       
IPR010908   Longin_dom       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR017907   Znf_RING_CS       
IPR001995   Peptidase_A2_cat       

SUPFAM

SSF53098   SSF53098        + More
SSF64356   SSF64356       
SSF57756   SSF57756       
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A1U8N896   V5GHM7   A0A0A9Z001   X1WVF9   A0A0K8SX96   A0A224XGH3   + More
A0A2S2PNC2   A0A2S2PM34   A0A0A9VYL4   A0A0A9VSF7   X1WY64   A0A1B6GGX5   A0A0A9WAJ3   A0A437AV42   A0A0A9WE49   X1WRA3   A0A0J7K7U0   A0A0A9WBL7   J9JVD6   X1XET3   X1WY95   J9K351   A0A1B6KIX6   A0A1B6LLT3   A0A0A9ZJJ6   A0A1B6MT91   A0A2S2NPW7   A0A1B6LKM8   X1XU26   A0A146KZL4   A0A0A9ZG52   X1X412   J9JNP4   J9JUM9   A0A0A9ZHU0   A0A1Y1LM33   A0A2S2PI15   A0A0A9W8L8   X1XU46   A0A0A9Z275   A0A1Y1KMX0   A0A146L5E8   A0A2S2NIB3   A0A1Y1LIG5   W8C1U1   A0A0A9X3X8   J9L9H5   A0A023EYR9   A0A023F0C4   A0A146L7F7   A0A146LBU6   J9LPA9   J9JVZ7   A0A2S2QVB8   A0A2S2NNC8   J9JUK4   J9KD60   X1WYQ7   A0A0A9WP39   A0A2S2PBK9   A0A146LEU7   A0A2S2QDN7   A0A2S2P1X6   A0A023F096   A0A2S2PLW6   A0A2S2NBR8   A0A2S2P963   A0A1B6KZV2   A0A0A9WH19   A0A146KRI6   A0A1B6MUZ9   A0A2S2NCY5   J9LIW1   A0A146M9H0   A0A0J7KDN6   A0A2S2NHU0   A0A2S2PC00   A0A2S2P2U4   J9JLG6   X1X8C2   A0A2S2NWE9   X1XTX7   A0A0A9YNG0   A0A0A9YYJ5   A0A0A9X2P1   A0A2S2QLL5   X1WYQ8   A0A0A9WW84   X1WZY4   A0A1U8N859   A0A2S2NZ22   W8ANH7   J9K0A1   J9L3C9   A0A0A9X8U7   A0A0A9WWW3   A0A2S2R2J0   A0A0A9WHD6   J9M7R2   X1X5R1  

PDB

4OL8     E-value=0.0459652,     Score=89

KEGG

NA   

GO

GO:0015074   GO:0003676   GO:0008270   GO:0016021   GO:0004190  

Length:

817

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0381000000000001

Exp number, first 60 AAs:

0.03245

Total prob of N-in:

0.00178

outside

1  -  817

 

 

Pi

4.716823

Theta

39.797414

Tajima's D

0.381331

CLR

106.401465

CSRT

0.476726163691815

Interpretation

Uncertain