Silkworm Genome Informatics Database

Gene

KWMTBOMO11063

Pre Gene Modal

BGIBMGA008311

Annotation

PREDICTED:_forkhead_box_protein_N3-like_isoform_X5_[Papilio_xuthus]

Location

Bomo_Chr18(-):11528426-11553354 View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Nuclear Reliability : 3.541

CDS

ATGGCGCCAATGCGCGGCGAACGTGGCGGGTCGCCGGCCCGAGGCGTTCGCGCGTCACTGCCGCTGCCCCGCCGGCTCATCAGGCAGATCGCGAGGCACGTCGCCTCCAGCGGCCGCTCGCTCAGGCGCCTCGAGGTCTCCGGGCGGGTCATCGACAACTTCGACGACATCGAGGGCGCTTCCGATGACTCGGACATGGAAACATCGCAACCCGCGGTTGCATGTGGAGGGAATGCCGGTAACTTGCCTCCAGCGGACAACGACGACGATCTCACCAGCCTCAGCTGGCTACAAGACAAGAACCTTCTCAGAGGTATAAACTTAACAAAAAGCGACATTGAAGACACGAAAACGATGGGCAGTCAAATCATTCTAAAGACAGAATCGAAAACTCCGCCGCCCGTAGTTCGGCCCCCCTCGCCCCCGCGTACTCCGGTAAAGGCTCCCCCCTCGCCCCCGGCGGTCACGCACACGAAGCCCCCGTATTCGTTCTCGTGCCTCATATTCATGGCGATCGAGGCGGCGCCCGCGCGGGCCCTGCCCGTCAAGGAGATCTACGCGTGGATCATCAAGCACTTCCCGTACTTCAAGCACGCTCCTCAGGGTTGGAAGAACAGCGTGCGACACAATTTGTCGCTGAATAAATGTTTCCACAAGGTGGCAGCAGCGCCGGGTCTCGGGAAAGGATCGTTGTGGACGGTCGACCCCCAGCACCGCGCTTCTTTAATACAGGCGTTCGGTCGTCAGCCGGCTCCGACCCCGGCGGGCGCGGCCGAGCCGAGCGGCGGCAAGAACTCGCCGGACCCGACGCTGTTCCCGTACCTGGCGCGGCGGCTGGCGGCGGAGCCCGGGGCCGACGAGTACCTGGCCGCCGCCACCGTGCTCGCCATGAAGTACGGACCCTCGGTACTCGAACAGTTGCCGCCGGCCGCGTCGCTGGTGATCTCGCGGTGCACGCGCGACGAGCACTCGTACAGCGGCGGGGGGGGCGAGGAGCGGCGCACGGCGGAGGCGCTGCTGCACCTCGCCGGCCTGCCCCCCTCCCCGGCCCTCGCGCCCAGCTAG

Protein

MAPMRGERGGSPARGVRASLPLPRRLIRQIARHVASSGRSLRRLEVSGRVIDNFDDIEGASDDSDMETSQPAVACGGNAGNLPPADNDDDLTSLSWLQDKNLLRGINLTKSDIEDTKTMGSQIILKTESKTPPPVVRPPSPPRTPVKAPPSPPAVTHTKPPYSFSCLIFMAIEAAPARALPVKEIYAWIIKHFPYFKHAPQGWKNSVRHNLSLNKCFHKVAAAPGLGKGSLWTVDPQHRASLIQAFGRQPAPTPAGAAEPSGGKNSPDPTLFPYLARRLAAEPGADEYLAAATVLAMKYGPSVLEQLPPAASLVISRCTRDEHSYSGGGGEERRTAEALLHLAGLPPSPALAPS

Uniprot

A0A212EJX7 A0A194PHC1 A0A3S2P3C8 A0A2A4K025 H9JFL4 A0A1B6EM42 + More
A0A1B6LQF3 K7J264 A0A1B6C7X4 A0A139WJ14 A0A139WIL6 V5GYN0 A0A195AUL3 A0A067RH70 A0A0T6B1D0 A0A2H8TM98 A0A1E1XNA4 K1PIM9 A0A1S4N1N2

Pubmed

22118469 26354079 19121390 20075255 18362917 19820115 + More
24845553 29209593 22992520 20566863

EMBL

AGBW02014369 OWR41781.1 KQ459604 KPI92448.1 RSAL01000035 RVE51321.1 + More
NWSH01000359 PCG77002.1 BABH01002324 BABH01002325 GECZ01030797 JAS38972.1 GEBQ01014059 JAT25918.1 GEDC01027953 JAS09345.1 KQ971338 KYB27821.1 KYB27820.1 GALX01002923 JAB65543.1 KQ976737 KYM75928.1 KK852508 KDR22393.1 LJIG01016212 KRT81279.1 GFXV01003256 MBW15061.1 GFAA01002699 JAU00736.1 JH816865 EKC18744.1 AAZO01007370 AAZO01007371

Proteomes

UP000007151 UP000053268 UP000283053 UP000218220 UP000005204 UP000002358 + More
UP000007266 UP000078540 UP000027135 UP000005408

PRIDE

H9JFL4

Pfam

PF00250 Forkhead

Interpro

IPR001766   Fork_head_dom        + More
IPR036390   WH_DNA-bd_sf
IPR018122   TF_fork_head_CS_1
IPR036388   WH-like_DNA-bd_sf
IPR030456   TF_fork_head_CS_2

SUPFAM

SSF46785 SSF46785

Gene 3D

1.10.10.10

CDD

cd00059 FH

ProteinModelPortal

A0A212EJX7 A0A194PHC1 A0A3S2P3C8 A0A2A4K025 H9JFL4 A0A1B6EM42 + More
A0A1B6LQF3 K7J264 A0A1B6C7X4 A0A139WJ14 A0A139WIL6 V5GYN0 A0A195AUL3 A0A067RH70 A0A0T6B1D0 A0A2H8TM98 A0A1E1XNA4 K1PIM9 A0A1S4N1N2

PDB

6NCM E-value=1.35927e-33, Score=357

KEGG

101739133 K09407 forkhead box protein N | (RefSeq) forkhead box protein N3-like

GO

GO:0003700 GO:0043565 GO:0005634 GO:0003677 GO:0006355 GO:0003676 GO:0005543 GO:0042626 GO:0016887 GO:0005622 GO:0006810 GO:0003824

Subcellular location

Nucleus

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00893999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00921

outside

1 - 354

Pi

185.222432

Theta

163.451114

Tajima's D

0.281788

CLR

1.45513

CSRT

0.449327533623319

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics