Silkworm Genome Informatics Database

Gene

KWMTBOMO11062

Pre Gene Modal

BGIBMGA008548

Annotation

PREDICTED:_protein_RMD5_homolog_A_[Amyelois_transitella]

Location

Bomo_Chr18(+):11514765-11519546 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.631

CDS

ATGGATTCCTGTATTGGGGTTGAGCAGGATTTAGACAAAGCAATTACAAAATTTACAAATTTAAATGAACATACCGATGAAGTATTGCAAGATATTATTAACAAAGTAGAGGAGCTGCGGCGGGAAATAGCCCAACAACCACCAAATACACCATTAACACCTGAACAAGCCCAGGTCGTGAGCGAATTAGCCTCTACCATCAAACAGAATGCATTTCAATTGTCAACAGATCACAGAGAACTCCATGCTACAGTGTCAAGAGTGGGCAAGTCTATAGATAGGCATTTCGTGGCCGATTATGCAGCAGTTGCTCCAAAGGCGGAAATGTTCTGTTCTGATGAAAATCGACCTATTATGGAACAAGCCATTGCACAACATTTGTACAGACAGGGCCTAGAGGACGTCGGTGATACGTTTGTAGCCGAAGCCGAAATCAGTGGCGTTGAGCGAACCTGTACGTTTGCGTCGGTACAGCGTTGTGCGACTGCATTGGCCGAGGGCGACCCCACTCCTGCCCTGCAGTGGGCTGAGCAGCACATGCAGGAACTACAGCATTCACCGCTGCCGTTCACTTTGCACAGGATGTACGCTTTGAAGCTGGCGCGCGAGGTGGGCGTGGGTGCGGCCATAGAGTACGCGCGCAGCACGTTCCCGCGACACGCGGCGCGGCACGAGCGCGCGCTGCAGGCGGCCGTGTGCGCGCTGGCGTGGTGCGCGCGCCCGCCCGCCGCCGCGCCGCCCGCGCCGCCGCCCGCCTACCGCCGCCTGCTGCAGCCGCGCGCGCTGGGGGCCGAGGCGGCCGAGCTGTTCGTGGCGGAGGCGTGCGCCGCGCTGCGCCTGGCCCCGCTGTCGGCGCTGGCGGGCGCGGCGCGGGCGGGCGCGCGCGTGCTCCCCGCGCTGCACGACATCCGCTCCAAGATGTCGCACCCGCACGTCATCGCGGCCTGGGCGGAGGACGAGCTGCCCTTCGAGGTGGACCTCGGTGACGAAGGCGGCGGCTACCACTCGGTGTTCGCTTGCCCGATCCTCCGCCAGCAGGCTTCCGACCAGAACCCGCCGATGCGCCTCCTCTGCGGTCACGTCATATCGCGAGACGCTCTCAACAAACTCGCTACGGCAGCCAAATTGAAGTGTCCATACTGTCCCATGGAACAATCACCCGCAGAAGCGAGGCAGATATTTTTCTCGTAG

Protein

MDSCIGVEQDLDKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQPPNTPLTPEQAQVVSELASTIKQNAFQLSTDHRELHATVSRVGKSIDRHFVADYAAVAPKAEMFCSDENRPIMEQAIAQHLYRQGLEDVGDTFVAEAEISGVERTCTFASVQRCATALAEGDPTPALQWAEQHMQELQHSPLPFTLHRMYALKLAREVGVGAAIEYARSTFPRHAARHERALQAAVCALAWCARPPAAAPPAPPPAYRRLLQPRALGAEAAELFVAEACAALRLAPLSALAGAARAGARVLPALHDIRSKMSHPHVIAAWAEDELPFEVDLGDEGGGYHSVFACPILRQQASDQNPPMRLLCGHVISRDALNKLATAAKLKCPYCPMEQSPAEARQIFFS

Uniprot

NA

ProteinModelPortal

NA

KEGG

101738985 K23333 E3 ubiquitin-protein transferase RMND5 [EC:2.3.2.27] | (RefSeq) protein RMD5 homolog B

GO

GO:0005515 GO:0005747 GO:0016021 GO:0003676 GO:0005543 GO:0042626 GO:0016887 GO:0005622 GO:0006810 GO:0003824

Length:

396

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01006

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00888

outside

1 - 396

Pi

187.743348

Theta

155.574044

Tajima's D

0.495308

CLR

1.335806

CSRT

0.51582420878956

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics