SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11061  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008312
Annotation
mitochondrial_prohibitin_complex_protein_2_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.88
 

Sequence

CDS
ATGGCACAAAGTAAGATAAATGACATGGCAGGAAAATTCGCTAAAGGTGGGCCACCTGGTCTTGGCATCGGTCTCAAAGTGGTAGCCGTTGTCGGCGCTGCGGCTTATGGCGTCTCCCAATCGGTGTTTACCGTGGAAGGAGGTCATCGTGCCATTATGTTCAACAGAATAGGAGGAGTACAACAGCACGTATTCACTGAAGGTATGCACTTCCGTATACCGTGGTTTCAATACCCCATCATTTATGATATCAGATCCCGACCTCGCAAGATATCTTCCCCGACTGGTTCAAAAGATTTACAGATGGTAAACATTTCCCTCCGAGTACTTTCTCGACCAGATGCCAATATGCTAGCAACAATGTACAGACAACTTGGAACAGATTATGATGAAAAGGTTTTGCCATCTATATGCAATGAAGTCCTAAAATCGGTTGTTGCCAAATTCAATGCCTCCCAGCTGATCACACAGCGTCAGCAGGTGTCTCTACTAATCAGAAGAGAGTTGGTTGAGCGTGCTGCTGATTTTAATATTATCCTTGATGATGTATCCCTCACTGAACTAAGCTTTGGTAAGGAATACACAGCTGCAGTAGAAGCTAAACAAGTTGCACAACAGGAGGCTCAGCGTGCAGCTTTTGTAGTTGAAAGGGCAAAGCAAGAGCGTCAACAGAAAATTGTGCAAGCAGAGGGAGAAGCTGAAGCTGCTGAGATGTTGGGTAAAGCCATGGGCATGAACCCTGGTTATTTAAAACTTAGGAAAATTCGTGCTGCTCAAAGTATTTCGAGAATGATTGCTCAATCTCAGAACCGTGTCTTCCTCCCTGGAAACAGTCTGATGATCAATCTTCAAGATCCTACTTTTGATGATTTGTCTGAGAAACTCACTAAAAAGAAGTAA
Protein
MAQSKINDMAGKFAKGGPPGLGIGLKVVAVVGAAAYGVSQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVEAKQVAQQEAQRAAFVVERAKQERQQKIVQAEGEAEAAEMLGKAMGMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPGNSLMINLQDPTFDDLSEKLTKKK

Summary

EMBL
BABH01002322    DQ311392    ABD36336.1    HQ337624    ADQ90002.1    NWSH01000359    + More
PCG77010.1    AK401721    KQ459604    BAM18343.1    KPI92450.1    AGBW02014369    OWR41779.1    KQ460154    KPJ17237.1    JTDY01001108    KOB74853.1    ODYU01008394    SOQ51960.1    NEVH01004413    PNF39567.1    PNF39568.1    KK853474    KDR07361.1    GEZM01045565    GEZM01045564    JAV77745.1    LJIG01009712    KRT82532.1    ATLV01023406    KE525343    KFB49098.1    JXUM01152402    GAPW01002914    KQ571446    JAC10684.1    KXJ68175.1    GGFK01004389    MBW37710.1    AXCN02000651    GAPW01002921    JAC10677.1    GGFL01002691    MBW66869.1    AAAB01008980    EAA13889.4    AXCM01001667    APCN01005755    GBHO01012067    GBHO01012063    GBRD01010596    GBRD01010594    GDHC01014664    JAG31537.1    JAG31541.1    JAG55228.1    JAQ03965.1    GGFL01002690    MBW66868.1    JXUM01062272    JXUM01062273    KQ562192    KXJ76445.1    CH477860    EAT35551.1    GBHO01012064    GBRD01010595    GBRD01010592    GDHC01011072    JAG31540.1    JAG55229.1    JAQ07557.1    ACPB03025237    GBHO01012066    GBRD01010593    GDHC01017467    JAG31538.1    JAG55231.1    JAQ01162.1    GFTR01004748    JAW11678.1    GDKW01000851    JAI55744.1    GAHY01000580    JAA76930.1    GGFM01002753    MBW23504.1    GGFK01004265    MBW37586.1    GGFJ01007872    MBW57013.1    CH478151    EAT33777.1    EAT35550.1    BT128250    AEE63210.1    AK417424    BAN20639.1    KQ971346    KYB26993.1    GFDL01011655    JAV23390.1    DS235076    EEB11424.1    GBGD01002319    JAC86570.1    EAT35549.1    GEMB01002672    JAS00521.1    GBBI01000773    JAC17939.1    GEDC01017066    JAS20232.1    EFA05476.1    ADMH02001884    ETN60638.1    CVRI01000057    CRL02359.1    GECL01003259    JAP02865.1    GALX01003498    JAB64968.1    DS231823    EDS26618.1    AJWK01006928    GDAI01000422    JAI17181.1    GEDC01020529    JAS16769.1    GANO01000732    JAB59139.1    GFDL01001160    JAV33885.1    JX317625    AFU08568.1    GAKP01006953    JAC51999.1    GFDF01004145    JAV09939.1    GAMC01007095    GAMC01007094    GAMC01007093    GAMC01007092    JAB99461.1    GECZ01029784    JAS39985.1    UFQT01000285    UFQT01000393    SSX22824.1    SSX23945.1    APGK01007420    APGK01007424    KB737275    KB737274    KB632191    ENN83049.1    ENN83055.1    ERL89831.1    GFDF01004187    JAV09897.1    GECU01015314    JAS92392.1    KQ982584    KYQ54408.1    JX317624    AFU08567.1    EF070576    ABM55642.1    GDHF01016394    JAI35920.1    AJVK01070774    GBXI01006328    JAD07964.1    GDHF01020585    JAI31729.1    SSX22823.1    GECZ01016196    JAS53573.1    GECZ01002254    JAS67515.1    GECZ01007011    JAS62758.1    GDHF01003225    JAI49089.1    GBXI01010391    JAD03901.1    GECU01019191    JAS88515.1    KQ977890    KYM98982.1    OUUW01000001    SPP73677.1    KQ976395    KYM93096.1    ADTU01020332   
Pfam
PF01145   Band_7
Interpro
IPR001107   Band_7        + More
IPR000163   Prohibitin       
IPR036013   Band_7/SPFH_dom_sf       
SUPFAM
SSF117892   SSF117892       

Ontologies

Topology

Length:
299
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.83716
Exp number, first 60 AAs:
16.81672
Total prob of N-in:
0.73765
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  299
 
 

Population Genetic Test Statistics

Pi
125.159447
Theta
119.149467
Tajima's D
0.0202
CLR
0.10635
CSRT
0.370131493425329
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 IVQAEGEAEAAEMIGK 100.00 3e-06
26280517 IGGQGTGIYGSIK 100.00 3e-06
27102218 FNASQIITQR 100.00 3e-06
28467696 IGGVAPIINTNQR 100.00 3e-06
28556443 IGGVQQHVFTEGMHFR 100.00 3e-06
28556443 GGPPGLGIGLK 100.00 3e-06
28556443 QIFVPAPDIK 100.00 3e-06
26822097 GGPPGIGIGIK 100.00 7e-05
26280517 IPVDMIGGQVAK 100.00 7e-05
28467696 IPVYVSEQYPK 100.00 7e-05
28556443 IPWFQYPIIYDIR 100.00 7e-05
28556443 IPWFQYPIIYDIR 100.00 7e-05
28556443 IPWFQYPIIYDIR 100.00 7e-05
28556443 IGGVQQHVFTEGMHFR 100.00 7e-05
28556443 IGGVQQHVFTEGMHFR 100.00 7e-05
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