Silkworm Genome Informatics Database

Gene

KWMTBOMO11059

Pre Gene Modal

BGIBMGA008314

Annotation

PREDICTED:_transcriptional_regulator_ATRX_homolog_[Amyelois_transitella]

Location

Bomo_Chr18(-):11474027-11505074 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.081

CDS

ATGCCCTTATCTATGCTCGAAAAATATCCAATAAATTACGATTGTAAATTATACAGAATAAGGAAAAAGAAAATTCTGACCACATCAGAGAAAGGTAGGAGAACAAGTGATAGTTCGGTTAATTCAGAAAAGGAAACAATACACAATGATACAGACCAACCACAAGTTACTGATGCTTCTGAGCAAGGTCAATTTCCAGACACATCTTTAGAAACATCTCATGTGTTAGATAAATCTGGACCAAATATAGAAAATGAAGAAGAAACAACATTAAATGTAGATTCATTACATTGCCAAATTGACACCTGCAATTTAGGCAATAATGTTGATGAAGACAGTCATAATGAAACTGCGAAGCAATATACCCCAGGATCAGAAAAATCTGAATGTGAACAAGCAGAAAAAGATAGTTTAAAGAAACATAAAAATGCAGTTTCTGAAAGTATACAGGAGTGTAGTAGAACTACTGAAGTAGCAGACAACTCAAGTAATATGATAGGTGTCAATAATTGTTCTAGAGAAACAGAAGACAAAAGTATTGATGGACCTGATGTAAATAAAGATCTTGTTATTACAACAGAAATGCTACTGGAGACTCTATTTGAAACAGAAACAGAAAAACCAAATGACGTAATTCTAAGCGAAAAAGAAGAACAAAAGAAACCTTTCATTAAATGTGTGAATTTAAATAAACTATTGAAACCTGATCTATACCAAGATGCCAATAAAGGATCCAAAAAGACAGGAGAAAATGAGAATGAACATAGCGAGTTACTGAACACAAACAGGAAGCAAGATAGTGTTCAGAAATCCACAAGAGTTGTTTCTGAAACAGGAAAAACTACAATATATGATACAGAAGATAACTACTGGAAGAAAAAAAGAGAAGAAGCTAAAGCATTTAAATCAAAACAATTCGTAATTTCAATAAATAGACTACCTAAATTAACTATCGCATTTCTACATGCCAATAAATTAAAAAGAATTGTTCAAAATGGATTAACTGTTTGTAAAATTAATCCAGAAATAGATAAAACAACTAAAGACATCTCAAGAGAAATAAAGTCAGCCCTCTTGAATGAGTCAGATTCTGATGGTTTTACTGCAGGAACACCTAAAACTTTATCTGCAGTTACTGAAAAAATCAAAGATTCCTTACTGATTGAGTCTGAAAGTGATGCAGGAGGTAAACATTCAGCAAGTGAGAATTATAGTTCAAAAAATTGTGAATCTCAAAAAGAGGTCCATAAACATAAATCCAAAAGAAAAAACAAAGATCTCAAGTCTATAGAGATAGACAAAATTAATGATTCAGAAGGTATTAAAAGTTCTGAAAATGATGAAGAGAAAAAATCTTATGACACTTCAAACATTCAAAACAGTAGAACGGAATCAGTGAAAACTTCTTTATTAGAAGATTCTGATTCCAACTCCAGTAAGAAAACCTTAGTGATTAGTAGAACAAAAGAGAACTGTTTTAATTCTAATGATGATTCTAAAGAAGATGATACTTCAAAATATAGTGAATGTAATGAAAACAGAAATGCTTCAGATAGTGCTAGTAAAGACAAAAATACTTCAACATTAAATCTAGAAACTATAAAAAATCATACAGGTGATGAAAATAGTGATAATAGTTCAAAAACTCCAATTAAGTCTAATGATAACTCATGTGAAACTCTTCATAATAATGAGAAAAAATTAACTCCTCAATCCAAAAGGAAACGAATAATGGAGAGCATGAAAGCAAAGAAAATGCTCTTGTCGTATTCTAGTTCTGATGAGGAAATACAGCAGAAAACAAGGTTTAAAAAAATCAAACGAGCATTGCTCGATGAAAGTTCAGATGATGAGAGTAACTCAAATCATCAAAAGCACAAGGAAAAGCAGAATAGTTCAGAAATTTCATCATCCTCATCTGAACGAAAGAAAAAGCAAGATTCAAAATTGGATATATCAAATAAAAAGGGCAATTCCAAAAACCCTAAAGCAGAGAAAGAGAAAATAAACAATGAGGACTCCCATAGAAGCAAGATGGTCCGATCTAAGACGAAGCCTGGGAGCAGCATCAGCCAAAATTCAGACACTCAGGATGACAAAGATGTTGATAGGCTTACAAACTTGGATGCGTTAGAGAAACCTCGTCGACGTGAAACTGAAGATAAGAGGAGTAGAACAAATAACAGAGCAAGATCTAAAGCAAACGAAATAATCGGTGAACAGATGCTCGAGCCGGACACTAGTTCTGATGTTGCTTCAGAAGCCGGGAGCGATGTTTGTGAAGAAATACCACCGGTAACATTTAACAATGGTATTGAGCATCTCAGTAAAAGTGAACTGCTGGGAGAAAGTGACTCGTCGATTTCAAATGAAAAAGAAAAAAGTTCAGAGAACACACCGACAGTGGACGAGTCTGAAGATGACAATTTAAAATCAAAACGACGTAAGGCGAACGCCATCTCGTCGGACTCTGAAGCCGGTTCGTCTCGCAAGAAGGAGGACCGAGAAGTCAAGCTGAGCGACTTCGAGGACTCTGAGGAGAGCTCTGAATCCAACAAGAAGAGCAAACGGAAGAAGAAGGGAAGTGAAAGTGACGCGTCCGGGTCTTGTTCCGATGGAAATAAGAAGAAACGGCGTAGAATCAAACAGATAAATGAGAGCGATTGTTCAGATTCGGAAGAAGAGACTGAGGGTAGGAATAAACATGGAAGGAAAAATATACGTAAGGTTATGGGTAAAGACCAGCTGGAAGAGGCTACCAAAAAAGCGGCGCGCCAGGAGAAGGAGAGGATTGCTAGAATCGCTGAGAGACAGAAATTGTACAACAATCTGGAATTTGATGAATCTGGAAAACCTGATGAAGTGGTCTTGGAGAAGGTTGTTCTTGATTTCGACCCAGAGACCAAGGAGCCGCTCATACAAGTTGACAGAGGCCTTGTCAAAAAACTAAAGCCACATCAGGCAAACGGAATAAAGTTCATGTGGGATGCGTGCTTTGAAAGTGTGAAACGTATAAAAAAGGACAAGGGCTCTGGGTGTATTTTGGCACATTGTATGGGCCTGGGAAAAACGTTACAAGTGATATCGCTGACGCACACGCTGCTGACGCACGGGTCGCTGACCGGCGTGAGCAGGGTGCTGGTGGTGTGCCCGCTGTCCACGGTCCTCAACTGGGTCAACGAGTTCCGCATGTGGTTGAAACACGCCGAGAACAACTTTGAAGTCGACGTGTACGAACTCTCCAGGTTCAAACAAAATTCAGAACGCGCATTCCAATTGAGTCAGTGGTACAAAAGCGGAGGTGTTTGCGTTCTCGGCTATGAAATGTTCCGGAATCTCTCAGCCGACAACACTAAGAAATTTAAGAAGAAAATGCTCAAGAACTTCCAGGAGAGCTTGGTTGACCCCGGTCCAGATCTAGTAGTATGTGACGAGGGTCATCTTCTGAAAAACGAAAAGACAAGCCTCTCGCAGTCTATGAACAAAGTGAAGACGCTACGTCGCATCGTACTTACTGGGACGCCCCTACAGAATAATCTGAAAGAATACTACTGCATGGTGCAGTTCGTGAAGCCGAACCTGCTGGGCAAGTACAACGAGTACCTGAACCGTTTCGTGAACCCGATCACCAACGGGCAGTACACGGACTCCACCGAGCACGACATCCGCGTCATGAAGAGGCGCTCGCACGTCCTACACAAGATGTTGGACGGAGCAGTGCAGAGGAGGGATTACGGAGTGCTAGCGCCTTTCCTGCCTCCGAAGCACGAATACGTACTCTTCATTACTCTCAGCGAAGTACAAGTCAAACTGTACCAACATTATTTGGAAAACTATTCACGAAGGCCGATGCCAGGGAAATCATCAGGATTCCTGTTCCCCGACTTCCAGTCGCTGCAGAGGATATGGACGCATCCGCTCGTTCTCAAGTACAACTCTGAACGCTACGAGATTATGCAGCAAAAGAAAAGAGAAAGAGAAGAAGAAGACTCCGAAGGATCACTTGTGGACTTCATTGACGACGACTCCACGCCTGAGGAAACTTCAACAGAGGAGTCTTCCGACGACTCATCAGATGTGAGTGACGACAGTCAAAAAAAGAGTAAGAAGAAGAAAGCAGCTAAGAAGAGCAAGGCGAAAGACTCTAAAGCTTCGACGCGTCGGGGGACCAGGGCCAACCCAGTGGAACAAGAAGATCATCATTCTGACATCGAGGAAGTGGTTGAGGTAAAAAATGAAAATCCGACTGAGTGGTGGATCAAACTTGTCACCGAGGACGAGCTGGAAGACATGCGGCACTCGCATAAACTTGTTCTGCTCTTCGACATATTGAGGCAGTGCGAAGCCATCGGAGATAAACTATTGGTGTTCTCACAATCTCTGTATTCATTGGACCTCATAGAACATTTCCTAGGTAAAGTAGACGACGCGACTCAGGCAGGCCGGATCGATGAGAAACTGGGCGGACACATGGGTTCATGGTCTCCCGGTATAGATTATTTTCGTTTAGATGGCTCTACGTCGTGCGAGAACCGCTCCATTTGGTGTAAGAATTTCAACAGAGAAGATAATCCAAGAGCAAGATTATTCTTGATCTCTACTCGGGCGGGTGGCCTCGGAATTAACTTGGTGGCGGCCAATCGCGTGGTCATATTTGATGTGTCTTGGAACCCTTCGCACGACGTGCAGAGTATCTTCAGAGTCTACCGATTTGGACAGAAGAAACCTTGTTATGTGTACAGGTTTTTGGCCATGGGCACAATGGAAGAAAAAATCTACGAGCGGCAAGTAACCAAACAAGCCATCTCGAAGCGCGTGATCGACGAGCAGCAGATAGACCGGCACTACGCCGAGAACGACCTCGCCGAGCTCTACAAGTTCGAGCCCGCCCCGCTCGCGCCCCGCGAGCTCCCCGCGCTGCCCAAGGACCGGCTGTTCGCCGAGATGCTGCGGGAGCACGAGCTGCAGATTTACAAATATCATGAGCATGACTCACTATTGGAGAACAAAGAAGAGGAGACTTTAACCGAGGAGGAACGTAAAGCCGCCTGGGAGGACTTCGAGAACGAAAAGAACAGACCGCCTCCCGCGCCCTTCCCCTCCGCCTGGCCCATGCACAATGGAATGATGCCGGGACTACTGGCGCAACAGCAGCAGCTGGCGTACGCGGTGGCGGCCATGCTGCGCAAGGACATGCCCAACATCACCGACAGCCAGATCCGGGACATGTTGCCGATGATATACAACTCTAATCCTGCGGTCGGTATGATACAGAAAATGAGCGAAATGTATAAGTATGCGCAGCCCAGTATGATGAATCCTGCAATGATGGGCTCTGCTATGAACGCCGCGACCGGCAGCGGCTCGAGCGGCTCCAGCTCGCTGCAGTACGAGCCGCCCTGGCAGAGACAGCAGCAACAACAACAACAAATGCGACTCCAACAACTCATGCAACATCAGAACCAAATGGGTGCGAAGTACTACGCAGGCGGACTGGGCAGCCGCGATCCGGTGGCCATGGCGCTGCAGCAGCAACGAGCCCGCGACCTCATGCTGGGCGGCACCCGGCCCCGCGGGCGGCCCCCCCTCCAGCGAGCCCCGCCCGTAGCGCACGCCCCGCCCGCGCACATGCAGGACGTCGTCAACCTCGACTCCGACTAG

Protein

MPLSMLEKYPINYDCKLYRIRKKKILTTSEKGRRTSDSSVNSEKETIHNDTDQPQVTDASEQGQFPDTSLETSHVLDKSGPNIENEEETTLNVDSLHCQIDTCNLGNNVDEDSHNETAKQYTPGSEKSECEQAEKDSLKKHKNAVSESIQECSRTTEVADNSSNMIGVNNCSRETEDKSIDGPDVNKDLVITTEMLLETLFETETEKPNDVILSEKEEQKKPFIKCVNLNKLLKPDLYQDANKGSKKTGENENEHSELLNTNRKQDSVQKSTRVVSETGKTTIYDTEDNYWKKKREEAKAFKSKQFVISINRLPKLTIAFLHANKLKRIVQNGLTVCKINPEIDKTTKDISREIKSALLNESDSDGFTAGTPKTLSAVTEKIKDSLLIESESDAGGKHSASENYSSKNCESQKEVHKHKSKRKNKDLKSIEIDKINDSEGIKSSENDEEKKSYDTSNIQNSRTESVKTSLLEDSDSNSSKKTLVISRTKENCFNSNDDSKEDDTSKYSECNENRNASDSASKDKNTSTLNLETIKNHTGDENSDNSSKTPIKSNDNSCETLHNNEKKLTPQSKRKRIMESMKAKKMLLSYSSSDEEIQQKTRFKKIKRALLDESSDDESNSNHQKHKEKQNSSEISSSSSERKKKQDSKLDISNKKGNSKNPKAEKEKINNEDSHRSKMVRSKTKPGSSISQNSDTQDDKDVDRLTNLDALEKPRRRETEDKRSRTNNRARSKANEIIGEQMLEPDTSSDVASEAGSDVCEEIPPVTFNNGIEHLSKSELLGESDSSISNEKEKSSENTPTVDESEDDNLKSKRRKANAISSDSEAGSSRKKEDREVKLSDFEDSEESSESNKKSKRKKKGSESDASGSCSDGNKKKRRRIKQINESDCSDSEEETEGRNKHGRKNIRKVMGKDQLEEATKKAARQEKERIARIAERQKLYNNLEFDESGKPDEVVLEKVVLDFDPETKEPLIQVDRGLVKKLKPHQANGIKFMWDACFESVKRIKKDKGSGCILAHCMGLGKTLQVISLTHTLLTHGSLTGVSRVLVVCPLSTVLNWVNEFRMWLKHAENNFEVDVYELSRFKQNSERAFQLSQWYKSGGVCVLGYEMFRNLSADNTKKFKKKMLKNFQESLVDPGPDLVVCDEGHLLKNEKTSLSQSMNKVKTLRRIVLTGTPLQNNLKEYYCMVQFVKPNLLGKYNEYLNRFVNPITNGQYTDSTEHDIRVMKRRSHVLHKMLDGAVQRRDYGVLAPFLPPKHEYVLFITLSEVQVKLYQHYLENYSRRPMPGKSSGFLFPDFQSLQRIWTHPLVLKYNSERYEIMQQKKREREEEDSEGSLVDFIDDDSTPEETSTEESSDDSSDVSDDSQKKSKKKKAAKKSKAKDSKASTRRGTRANPVEQEDHHSDIEEVVEVKNENPTEWWIKLVTEDELEDMRHSHKLVLLFDILRQCEAIGDKLLVFSQSLYSLDLIEHFLGKVDDATQAGRIDEKLGGHMGSWSPGIDYFRLDGSTSCENRSIWCKNFNREDNPRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDVQSIFRVYRFGQKKPCYVYRFLAMGTMEEKIYERQVTKQAISKRVIDEQQIDRHYAENDLAELYKFEPAPLAPRELPALPKDRLFAEMLREHELQIYKYHEHDSLLENKEEETLTEEERKAAWEDFENEKNRPPPAPFPSAWPMHNGMMPGLLAQQQQLAYAVAAMLRKDMPNITDSQIRDMLPMIYNSNPAVGMIQKMSEMYKYAQPSMMNPAMMGSAMNAATGSGSSGSSSLQYEPPWQRQQQQQQQMRLQQLMQHQNQMGAKYYAGGLGSRDPVAMALQQQRARDLMLGGTRPRGRPPLQRAPPVAHAPPAHMQDVVNLDSD

Uniprot

A0A3S2TP26 A0A194PGM1

Pubmed

26354079

EMBL

RSAL01000035 RVE51323.1 KQ459604 KPI92452.1

Proteomes

UP000283053 UP000053268

Pfam

PF00176 SNF2_N + More
PF00271 Helicase_C

Interpro

IPR014001   Helicase_ATP-bd        + More
IPR001650   Helicase_C
IPR000330   SNF2_N
IPR038718   SNF2-like_sf
IPR027417   P-loop_NTPase

SUPFAM

SSF52540 SSF52540

Gene 3D

3.40.50.10810

CDD

cd00079 HELICc

ProteinModelPortal

A0A3S2TP26 A0A194PGM1

PDB

1Z3I E-value=2.26388e-32, Score=354

KEGG

101743077 no KO assigned | (RefSeq) zinc finger protein 431-like

GO

GO:0005524 GO:0006281 GO:0016021 GO:0003676 GO:0005543 GO:0042626 GO:0016887 GO:0005622 GO:0006810 GO:0003824

Length:

1886

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00632999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1886

Pi

194.950983

Theta

168.513669

Tajima's D

0.211751

CLR

0.646535

CSRT

0.431028448577571

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics