Pre Gene Modal
BGIBMGA008317
Annotation
PREDICTED:_beta-amyloid-like_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.03
Sequence
CDS
ATGGCGACAAATGGCGCTGATCCCCAAGTAGCAGTGCTATGCGAGGCCGGTAGCACGTACCACCCGCAGTACATGTCAGCCGCCGGACGGTGGACTCCCGATCTGACCACGAAACCGCATAACTGCCTCAAGGACAAAATGGAGATCCTCGACTACTGCAAAAAGGTATACCCGAGTCATGACATTACGAACATCGTGGAAGCATCTCATTACGTGAAAGTGAGCAACTGGTGCAAGCTGGGAACCGCCAACGCTGCCAAATGCAAGGTCACTAGATGGGTGAAGCCTTTCCGTTGTCTCGAAGGTCCATTCCAATCGGACGCTCTGCTGGTGCCCGAGAGCTGCCTGTTCGACCACATCCACAACCAGAGTCGATGCTGGCAGTTCGCCCGGTGGAACGCGACGGCTGGACGCGCTTGTGCCCAACGCGGACTTCGACTCAGGACTTTCGCTATGCTGTTGCCTTGCGGGATCAGTCTGTTTTCTGGAGTCGAATTCGTCTGCTGCCCCAAGCATTTCAAAGAAAACGTTAAAATGCACAAACCCATGGACGTAGGAGTACCCGTAAGTCCTGGCGGAGAGGAAATGTTGGCAGCTTCCGCGGCTATGGACGAACGCGACGACGACCTGCTCGACGACGATGATGCTCTGGATGATGATGATGACGACGACACCCTCAACCTGAGCGACGATGACGACGACGATGATACTGATGACGGTAAATTCAATTTAGCAACTAATACAAATAAAGTAGAGAATAGAATATTAGACATGGACGAGGACGAAGATGCTGATCTGTCTCGCGACGATGATGCGGAGGACGATGACTATACCGATGGCGACGACAGCGCCTGGCCCCACCCCGAGTCCTCGTCCTCGCCGTCGACCACCACTCCCACCACCACAACTACCACTACCACCGCGGCTTCTACTGCTACCTCTGACCCTTACTTCTCTCACTTTGATCCTCGCACTGAACACCAGAGCTACAAGGACGCCCAGCAACGCTTGGAGGAGACCCACCGTGAGAAGATCACGAAGGTGATGAAGGAATGGTCGGAACTGGAAGACCGTTACCAGCAGATGATGACCGCGGACCCCGCCGCCGCCCAAACCTTCCGCCAGCGGATGACCGCCAAGTTCCAGGCTAACGTTCAATCTTTGGAGGAAGAGGGTGTATCGGAGCGGCGTCGGCTGGCTGCTCTCCACCAGCAGCGCGTGCTCGCTCACCTCGCCCAGCGTCGCCGCACCGCGCTCGCTTGCTACACCCGCTCGCTCAAGGACACACCGCCTAACGCCCACCGCGTCCAGAAATGCCTGCAGCGATTGGTGCGTGCTCTGGCCGCCGAACGTAGTGGAGCTCTGGCCGCGTGGCGCCGCGCTGCAGCCGCTGGAAGGGAGGCCGCCTCAGCTGAACGCGCCAGTGCCGCTGACCGACTTCAGGATGCCGACCGTGCCCTCCAGCGAGCCCTCTCGTCTCTCCGCCGTCGTCCCCACCTCTACGCCAGCATCGGAACTGCTATTGAAGATTATGTTCAGTCAATGCAGTCCAAAGATGACATGGCCGTGTCTCTGATGTCGATGACCCCTGAGGCTGAGGAGCTGCTGTTGGACCGCATCGAGGCCGAAGTCCAGAGGGAGCAGGCCGCCAGGGAACAGCTCAGCGTCAAGAGAGACCAGCGCGCCAAGCAGCGCCAGGACATCCAGAATGAAAGAACCAAGACATCCAACGGTGTTAAGGATAGCGAAGAAAGCGATGACGAAACGAATGAAATAAGCGAGGGCGAGACGAGCAGCGTTGCCCCCTCCGCGGTGCCAGCCTCCCCCGCGTCCAGCGCGGCCCCCGCCTCGCCCTCCCCTCTCCCCTCCCTCGCTCCAGTTCCCGTACATGACGTCACTACACGGGCCGCTTACACTCAGGACACCACGACTACCGAAATCGTAACGACAACCGTGACCGACGCTCCGGAGGGTGAGACCGAGACAGCCGAAGTGGAAACCACCAGCCGCCGTACAACCAGCGAGGTATTCTATACAAATACTGAAGGAGAAGGACTTCGTGCAGCCTTGGAACATGCCGAGGAACGCGCCCCGCCCCCGCCCGCACACGCTCTCAAACACGAACTGCAACACTCGCAGCCTGGTTACACAGTGCGCGGCACAGGCGGCGCCGGTGGGTCTGGCGGGGCGGGTGCCCTGTACCCGGCGCTGTGTGTGGGCGGCGCGGCGCTGGCGGCCGCCGCGTGCGTCGCCCTCGCTGTCGCTCGTCGCCGCGACCGCGCTCCTCAAGCACAAGGCTTCGTGCAGGTGGAGCAGACCGGTGTGGTGGCTCCGACTCCAGAGGAACGACACGTAGCCAACATGCAGATCAATGGCTACGAGAACCCCACCTACAAATACTTCGAGGTCAAGGAGTAA
Protein
MATNGADPQVAVLCEAGSTYHPQYMSAAGRWTPDLTTKPHNCLKDKMEILDYCKKVYPSHDITNIVEASHYVKVSNWCKLGTANAAKCKVTRWVKPFRCLEGPFQSDALLVPESCLFDHIHNQSRCWQFARWNATAGRACAQRGLRLRTFAMLLPCGISLFSGVEFVCCPKHFKENVKMHKPMDVGVPVSPGGEEMLAASAAMDERDDDLLDDDDALDDDDDDDTLNLSDDDDDDDTDDGKFNLATNTNKVENRILDMDEDEDADLSRDDDAEDDDYTDGDDSAWPHPESSSSPSTTTPTTTTTTTTAASTATSDPYFSHFDPRTEHQSYKDAQQRLEETHREKITKVMKEWSELEDRYQQMMTADPAAAQTFRQRMTAKFQANVQSLEEEGVSERRRLAALHQQRVLAHLAQRRRTALACYTRSLKDTPPNAHRVQKCLQRLVRALAAERSGALAAWRRAAAAGREAASAERASAADRLQDADRALQRALSSLRRRPHLYASIGTAIEDYVQSMQSKDDMAVSLMSMTPEAEELLLDRIEAEVQREQAAREQLSVKRDQRAKQRQDIQNERTKTSNGVKDSEESDDETNEISEGETSSVAPSAVPASPASSAAPASPSPLPSLAPVPVHDVTTRAAYTQDTTTTEIVTTTVTDAPEGETETAEVETTSRRTTSEVFYTNTEGEGLRAALEHAEERAPPPPAHALKHELQHSQPGYTVRGTGGAGGSGGAGALYPALCVGGAALAAAACVALAVARRRDRAPQAQGFVQVEQTGVVAPTPEERHVANMQINGYENPTYKYFEVKE
Summary
Uniprot
ProteinModelPortal
PDB
4PWQ
E-value=1.81992e-30,
Score=334
Ontologies
GO
Topology
Length:
805
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.68491
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.05525
outside
1 - 731
TMhelix
732 - 754
inside
755 - 805
Population Genetic Test Statistics
Pi
238.158891
Theta
158.233684
Tajima's D
2.232407
CLR
0.075769
CSRT
0.913304334783261
Interpretation
Uncertain
