Gene

KWMTBOMO11051  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008542

Annotation

vacuolar_ATP_synthase_subunit_D_[Bombyx_mori]

Location

Bomo_Chr18(+):10965474-10970982      View in EpiBrowser

Full name

V-type proton ATPase subunit D       + More
V-type proton ATPase subunit D 1      

Alternative Name

Vacuolar proton pump subunit D
Vacuolar H+ ATPase subunit 36-1
Vacuolar proton pump subunit D 1
dV-ATPase D

Location in the cell

Cytoplasmic   Reliability : 1.169 Mitochondrial   Reliability : 1.625

CDS

ATGTCTGGGAAAGATAGATTAGCGATTTTCCCTTCTCGGGGTGCCCAGATGTTAATTAAGGGTCGCCTGGCTGGTGCAGTGAAAGGCCATGGTCTCCTCAAGAAGAAGGCTGATGCCCTTCAAGTGAGGTTCCGTATGATCTTGAGCAAAATCATTGAGACTAAAACCCTTATGGGTGAAGTGATGAAAGAAGCTGCTTTCTCTTTGGCTGAAGCTAAGTTCACAACTGGAGACTTCAACCAAGTTGTCCTACAAAATGTTACCAAGGCTCAAATCAAGATTAGGTCCAAGAAGGACAATGTTGCTGGTGTCACCCTCCCAATCTTTGAGTCATACCAGGATGGTTCTGATACCTACGAGTTGGCTGGTTTGGCCCGTGGTGGGCAGCAGCTTGCAAAGCTGAAGAAGAACTTCCAGAGCGCTGTAAAGCTTTTGGTCGAGTTAGCTTCACTGCAGACTTCATTTGTCACTCTCGACGAGGTTATTAAGATCACGAATAGACGTGTCAACGCCATTGAGCACGTAATCATTCCCCGGCTGGAACGTACACTCGCGTACATCATCTCCGAGCTGGACGAGCTTGAGCGTGAGGAGTTCTACCGTCTCAAGAAGATCCAGGACAAGAAGAAGATTATCAAGGACAAGGCAGAAGCGAAAAAAGCCGCTCTCCTGGCTGCCGGCAACGACTTGCGCGGTGGGGTCACCAACTTGCTGGACGAGGGCGATGAGGACTTGCTGTTCTAA

Protein

MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYRLKKIQDKKKIIKDKAEAKKAALLAAGNDLRGGVTNLLDEGDEDLLF

Description

Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (By similarity).

Subunit

V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c', c'' and d).

Similarity

Belongs to the V-ATPase D subunit family.

Keywords

Hydrogen ion transport   Ion transport   Transport   Complete proteome   Reference proteome  

Feature

chain  V-type proton ATPase subunit D

Uniprot

Q2F5J5   A0A0B5L9U3   A0A0N1PHG0   A0A212EXI0   S4PT98   Q9U0S4   + More
A0A2A4JDX5   A0A194PGN0   A0A2H1W3N8   A0A1J1IJ98   A0A0R6XLQ4   A0A0L0C3F9   A0A1E1WSZ4   H9JG95   A0A1L8EEW8   A0A1I8Q819   K7J5T1   T1PHY7   A0A1A9XA11   A0A1A9VWQ3   A0A1B0AXZ3   A0A1B0A184   A0A1A9WWX7   D3TLR6   Q6PPH4   A0A1B6I5Z8   A0A0A1XE03   A0A0K8WCV4   A0A034WM46   W8B2U5   A0A0K8TRG0   A0A1I9WLG3   D2A2Z0   B4KNU4   E2BRT1   A0A1B0GMK9   B4NMT5   A0A1B6FD11   E0W3E9   M9TIB0   A0A0M4EJR8   A0A1W4WCQ3   A0A0J9RDK9   B4P7C0   Q9V7D2   B3NQB7   A0A1Y1MDE4   B4J8E1   A0A154PQ92   A0A182PW81   A0A158NZX1   B3MHH8   B4LJW3   A0A1L8DFE3   A0A3B0JSS3   Q28YM9   B4H8F2   A0A026WZR7   A0A182KGI3   A0A084W5Q0   A0A1S4H3M6   A0A182VPT2   A0A182KYE4   A0A182RPK1   A0A0J7L6D8   A0A2M3Z3G3   A0A2M4A4L8   A0A2M4BY29   A0A182QDZ7   W5JTQ6   A0A182YN37   A0A0M8ZT39   A0A182IL65   J3JU11   A0A1B6E9N4   A0A1Q3FYT3   A0A1B0CX38   A0A1W4WCL2   A0A023EL05   A0A182F8V0   Q1HQU5   V5GKJ3   V9IJ71   A0A088AP17   A0A0P4VLF5   R4FQ03   A0A182MBX6   A0A0C9RVM8   A0A336MIU6   A0A0V0G4Y6   A0A2S2QL20   A0A023FBA3   U5EZF8   A6YPI5   A0A2H8TGT0   A0A2J7PW84   B4QGW0   A0A067QTK5   Q201Y0   A0A0C9RZD5  

Pubmed

26354079    22118469    23622113    11030595    26108605    19121390    + More
20075255    25315136    20353571    25830018    25348373    24495485    26369729    27538518    18362917    19820115    17994087    20798317    20566863    23950915    22936249    17550304    10731132    12537572    12537569    28004739    21347285    15632085    24508170    30249741    24438588    12364791    20966253    20920257    23761445    25244985    22516182    24945155    26483478    17204158    17510324    27129103    25474469    18207082    24845553   

EMBL

DQ311428    ABD36372.1    KM923795    AJG43854.1    KQ460813    KPJ12145.1    + More
AGBW02011741    OWR46202.1    GAIX01012413    JAA80147.1    AJ251992    NWSH01001778    PCG70171.1    KQ459604    KPI92462.1    ODYU01006106    SOQ47658.1    CVRI01000048    CRK99134.1    KP341656    GDQN01009026    AKK21115.1    JAT82028.1    JRES01000955    KNC26777.1    GDQN01001123    JAT89931.1    BABH01002283    GFDG01001561    JAV17238.1    AAZX01020590    KA647488    AFP62117.1    JXJN01005460    CCAG010000155    EZ422368    ADD18644.1    AY588072    AAT01084.1    GECU01025355    JAS82351.1    GBXI01005100    JAD09192.1    GDHF01003397    JAI48917.1    GAKP01003732    JAC55220.1    GAMC01013683    JAB92872.1    GDAI01000877    JAI16726.1    KU932347    APA33983.1    KQ971338    EFA02241.1    CH933808    EDW08989.1    GL450024    EFN81600.1    AJVK01026270    CH964282    EDW85674.1    GECZ01021682    JAS48087.1    DS235882    EEB20155.1    KC473162    AGJ51962.1    CP012524    ALC41542.1    CM002911    KMY94011.1    CM000158    EDW92065.1    AF218238    AE013599    AY069116    CH954179    EDV55893.1    GEZM01036930    JAV82335.1    CH916367    EDW02300.1    KQ435007    KZC13534.1    ADTU01005077    CH902619    EDV37978.2    CH940648    EDW61617.1    GFDF01008979    JAV05105.1    OUUW01000001    SPP75781.1    CM000071    EAL25936.1    CH479223    EDW34987.1    KK107063    QOIP01000005    EZA61236.1    RLU22589.1    ATLV01020682    KE525304    KFB45544.1    AAAB01008971    LBMM01000532    KMQ98118.1    GGFM01002282    MBW23033.1    GGFK01002435    MBW35756.1    GGFJ01008773    MBW57914.1    AXCN02001878    ADMH02000408    ETN66668.1    KQ435859    KOX70575.1    BT126722    AEE61684.1    GEDC01010438    GEDC01002646    JAS26860.1    JAS34652.1    GFDL01002338    JAV32707.1    AJWK01033182    JXUM01064039    JXUM01064040    GAPW01003726    KQ562279    JAC09872.1    KXJ76246.1    DQ440349    CH477615    ABF18382.1    EAT38272.1    GALX01003877    JAB64589.1    JR048522    AEY60692.1    GDKW01000648    JAI55947.1    GAHY01000649    JAA76861.1    AXCM01002501    GBYB01013015    JAG82782.1    UFQS01001095    UFQT01000769    UFQT01001095    SSX08978.1    SSX27087.1    SSX28889.1    GECL01003002    JAP03122.1    GGMS01009160    MBY78363.1    GBBI01000072    JAC18640.1    GANO01000874    JAB58997.1    EF638996    ABR27881.1    GFXV01001436    MBW13241.1    NEVH01020936    PNF20598.1    CM000362    EDX07223.1    KK852969    KDR13105.1    ABLF02041083    DQ413206    ABD72674.1    GBYB01013491    JAG83258.1   

Proteomes

UP000053240    UP000007151    UP000218220    UP000053268    UP000183832    UP000037069    + More
UP000005204    UP000095300    UP000002358    UP000095301    UP000092443    UP000078200    UP000092460    UP000092445    UP000091820    UP000092444    UP000007266    UP000009192    UP000008237    UP000092462    UP000007798    UP000009046    UP000092553    UP000192221    UP000002282    UP000000803    UP000008711    UP000001070    UP000076502    UP000075885    UP000005205    UP000007801    UP000008792    UP000268350    UP000001819    UP000008744    UP000053097    UP000279307    UP000075881    UP000030765    UP000075920    UP000075882    UP000075900    UP000036403    UP000075886    UP000000673    UP000076408    UP000053105    UP000075880    UP000092461    UP000192223    UP000069940    UP000249989    UP000069272    UP000008820    UP000005203    UP000075883    UP000235965    UP000000304    UP000027135    UP000007819   

PRIDE

Q2F5J5    Q9U0S4    H9JG95    Q9V7D2    A0A088AP17   

Pfam

PF01813   ATP-synt_D

Interpro

IPR002699   V_ATPase_D       

ProteinModelPortal

Q2F5J5   A0A0B5L9U3   A0A0N1PHG0   A0A212EXI0   S4PT98   Q9U0S4   + More
A0A2A4JDX5   A0A194PGN0   A0A2H1W3N8   A0A1J1IJ98   A0A0R6XLQ4   A0A0L0C3F9   A0A1E1WSZ4   H9JG95   A0A1L8EEW8   A0A1I8Q819   K7J5T1   T1PHY7   A0A1A9XA11   A0A1A9VWQ3   A0A1B0AXZ3   A0A1B0A184   A0A1A9WWX7   D3TLR6   Q6PPH4   A0A1B6I5Z8   A0A0A1XE03   A0A0K8WCV4   A0A034WM46   W8B2U5   A0A0K8TRG0   A0A1I9WLG3   D2A2Z0   B4KNU4   E2BRT1   A0A1B0GMK9   B4NMT5   A0A1B6FD11   E0W3E9   M9TIB0   A0A0M4EJR8   A0A1W4WCQ3   A0A0J9RDK9   B4P7C0   Q9V7D2   B3NQB7   A0A1Y1MDE4   B4J8E1   A0A154PQ92   A0A182PW81   A0A158NZX1   B3MHH8   B4LJW3   A0A1L8DFE3   A0A3B0JSS3   Q28YM9   B4H8F2   A0A026WZR7   A0A182KGI3   A0A084W5Q0   A0A1S4H3M6   A0A182VPT2   A0A182KYE4   A0A182RPK1   A0A0J7L6D8   A0A2M3Z3G3   A0A2M4A4L8   A0A2M4BY29   A0A182QDZ7   W5JTQ6   A0A182YN37   A0A0M8ZT39   A0A182IL65   J3JU11   A0A1B6E9N4   A0A1Q3FYT3   A0A1B0CX38   A0A1W4WCL2   A0A023EL05   A0A182F8V0   Q1HQU5   V5GKJ3   V9IJ71   A0A088AP17   A0A0P4VLF5   R4FQ03   A0A182MBX6   A0A0C9RVM8   A0A336MIU6   A0A0V0G4Y6   A0A2S2QL20   A0A023FBA3   U5EZF8   A6YPI5   A0A2H8TGT0   A0A2J7PW84   B4QGW0   A0A067QTK5   Q201Y0   A0A0C9RZD5  

PDB

6O7X     E-value=3.48274e-48,     Score=481

KEGG

692984    K02149 V-type H+-transporting ATPase subunit D | (RefSeq) vacuolar ATP synthase subunit D

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04145    Phagosome - Bombyx mori (domestic silkworm)
04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0042626   GO:0006811   GO:0046961   GO:0033176   GO:0033181   GO:0000221   GO:0015991   GO:0005634   GO:0008270   GO:0003676   GO:0005543   GO:0016887   GO:0005622   GO:0006810   GO:0003824  

PANTHER

PTHR11671  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00462999999999999

Exp number, first 60 AAs:

0.00159

Total prob of N-in:

0.03152

outside

1  -  247

 

 

Pi

18.148157

Theta

164.790074

Tajima's D

0.174877

CLR

1.786311

CSRT

0.418029098545073

Interpretation

Uncertain