SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11045  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008321
Annotation
PREDICTED:_spectrin_beta_chain_isoform_X2_[Amyelois_transitella]
Full name
Spectrin beta chain      
Location in the cell
Cytoplasmic   Reliability : 1.668 Nuclear   Reliability : 1.397
 

Sequence

CDS
ATGACGACCGACATCTCGGTGTCCCGATGGGACCCGTCCGTCGGCCACGGACAGGAGATCATTGATGAAATCGAGTACGACGGCGGAAATTCATCGTCGAGGTTATTCGAACGATCGCGCATTAAAGCGCTTGCAGACGAACGAGAGAGCGTGCAAAAGAAGACATTTCAAAAATGGGTGAACTCACATTTAGTTCGCGTCGGGTTCCGAATTGGGGATCTGTACGTCGATATGAGAGATGGAAAGATGCTTATCAGACTACTCGAGGTGCTGTCTGGAGAGAGACTGCCTCGTCCAACAAAAGGCAAAATGCGTATCCACTGCTTGGAGAACGTGGACAAGGCGCTTCAGTTTCTGCGCGAACAAAGAGTGCACCTGGAGAACATGGGGTCCCATGACATCGTCGACGGCAACCCTAGGCTCAGTCTTGGTCTCATCTGGACTATCATTCTGCGCTTCCAGATCCAAGACATTACAATCGAAGAAACCGACAACAAGGAAACGAAATCGGCGAAGGACGCTCTCCTTCTTTGGTGTCAAATGAAGACGGCGGGTTATAACAACGTGAACGTCCGCAACTTCACGACGTCCTGGCGGGACGGGTTGGCGTTCAACGCGATCATACACAAGCACAGGCCCGACCTTGTTCAGTTCGAGAAACTGCACAGGAGCAACCCTATCCACAACCTTAACAACGCCTTCAACGTTGCCGAGGAAAAGCTTGGACTCACCAAGTTGCTTGACGCGGAAGACATCGCTGTCGACCATCCCGACGAGAAGTCCATCATCACGTACGTGGTGACGTACTATCACTACTTCAGCAAGATGAAGCAGGAGACAGTCCAAGGCAAGAGGATCGGAAAGGTCGTCGGTATCGCGATGGAAAACGACAAGATGATGCAGGAATACGAGTCGCTCACCAGCGATCTCCTGCAGTGGATCGAGCGAACAATCGAGGCGCTCGGCGACAGAACATTCGCGAACTCTCTGGAGGGAGTGCGTCAACAATTGATTCAGTTCGCGAACTATCGCACCGTCGAGAAACCGCCTAAGTTCGTGGAGAAGGGCAACCTGGAGGTGCTGCTGTTCACGCTGCAGTCGCGCATGCGCGCCGCCAACCAGCGCCCGTACACGCCGCGCGAGGGCCGCATGATCCACGACATCAACCGCGCCTGGGAGACGCTGGAGAAGGCCGAGCACGAGCGGGAGCTGGCGCTGCGGGAGGAGCTCATCCGCCAGGAGAAGCTCGAGCAGCTCGCCGCCAGATTCAACCGTAAAGCTCAGATGCGCGAGACCTGGCTGTCGGAGAACCAGCGCCTGGTGAGCCAGGACAACTTCGGGTTCGACCTGGCGGCCGTGGAAGCCGCCGCCAAGAAGCACGAGGCCATCGAGACCGACATCTTCGCGTACGAGGAGCGCGTGCAGGCCGTCGTCGCCGTCTGCTCGGAGCTGCAGGCCGAGAGGTACCACGACATCGAGCGTGTGTGCGCGCGGCGCGACAACGTGCTGCGCCTGTGGGCCTACCTGCTGGAGCTGCTGCGGGCGCGCCGGGCTCGACTCGAACTGTCCCTGCAGCTGCAACAGAACTTCCAGGAAATGCTGTACATCCTCGACTCGATGGAAGAGATCAAGATGCGTCTCTTGACAGACGACTACGGCAAACATTTGATGGGAGTCGAAGATTTATTACAAAAGCATGCGCTGGTTGAAGCCGACATCAACGTACTCGGAGAACGAGTCAAGGTGGTGGTCGGACAGTCGCAGCGCTTCCTGGAGGGCGAGGGCGGCGCGTACCGGCCGTGCGACCCCGCCGTCACCGTGGACCGCATACAGCAGCTCGAGAACGCGTACGCAGAGCTCGTGCACCTCGCCGTGGAGCGCAGAAAGCGTTTGGAGGACAGCCGCAAACTGTGGCAGTTCTACTGGGACATGGCTGATGAAGAGAACTGGATCAAGGAGAAGGAACAGATCGTCTCCGTTGATGACATCGGACACGACCTCACTACCGTGTACTTGCTGATATCGAAGCACAAGGCGCTGGAGGCCGACGTGCTGGCCCACGAGCCGCAGCTAATGAGCGTGGCGGCGGTCGGCGACGAGCTCATCTCCCAGGGACACTTCGGCGCTGACAGGATCCAAGAACGCCTCCGTGACATCCTGTCGCAATGGAACCACCTCCTCGACTTGGTGTCGCTCCGCAAGAGTCGGCTGGACGCCGCCGTGCGCTACCACCAACTGTTTGCTGATGCCGACGACATCGACAACTGGATGCTCGACACCCTCAGATTGGTTTCGTCTGAGGACACCGGCGTTGACGAAGCTCAGGTGCAGAGCCTGCTGAAGAAACATAAGGACGTAACCGACGAACTCAAGAACTACGCCAACGTCATTCAGCAACTGAAGCAACAGGCGCAGGAGCTGAGCCCGGAGGACGCCAACAGCGGCGAGGTGCGCGAGCGGCTGGCGGCCATCGACGCGCGGCACGGCGAGCTGGCCGAGCTGGCGCGCCTCCGCAAGCAGCGCCTGCTGGACGCGCTGTCGCTGTTCAAGCTGCTCGCCGAGGCCGACGCCGCCGACCAGTGGATCGCGGAGAAGCACCGCATGCTCGACACCATGCTGCCGCCCAGCGACATCGACGACGTCGAGATCATGAAGCACAGATACGACGGCTTCGACAAGGAGATGAACGCGAACGCGTCCCGCGTGGCCGTCGTGAACCAGCTGGCGCGGCAGCTCGTGCACGTGGAGCACCCGCAGGCGCCGCGCATCCAGGACCGCCAGCACCAGCTCAACCACGCCTGGAGCGCGCTCCGGGAGAAGGCTGAAGCGAAGAAGGATGAGCTTAAGTCCGCTCAAGGTGTGCAGACATTCCACATCGAATGTCGCGAGACCGTCTCGTGGATCGAGGACAAGAAACGCATACTGCAGCAAACCGACGACCTCGAGATGGATCTTAACGGCGTGATGACTCTCCAACGTCGTTTGTCCGGAATGGAGCGCGACTTGGCCGCCATACAGGCTCGCATCTCGTCCCTGGAGAGCGAGGCCAGCGCCATCGAGAACGAACATCCCGAGGAGGCACAACTCATTCGGGAACGCGTCGAACAGATCACTCAGAACTGGGAGCAACTCACTCACATGCTGAAAGAACGCGACTCGAAATTGGAAGAGGCCGGAGACTTACATCGTTTCCTGCGCTCCGTCGATCATTTCCAGGCGTGGCTCACAAAGACGCAGACCGATGTTGCTTCCGAAGATATCCCATCAAGTCTGCCTGAGGCTGAGAAACTCCTTTCTCAGCACCAAACCATCAAAGAGGAGATTGATAACTATAAGGATGAATATGCTAAGATGATGGAATATGGAGAGAAGATTACTGCCGAACCGTCCACCCAAGATGATCCACAGTATATGTTCCTTCGCGAACGTTTGAAGGCACTGCGCGAGGGATGGGCCGAGCTGCAGCAGATGTGGGAGAACCGACAGCAGCTCCTGGCGCAGAGCCTCGAGTTGCAGCTATTGCAGCGTGATGCCAGACAGGCTGAAGTTTTACTTGCACACCAAGAACACAGGCTCGCCAAAACCGAGCCTCCGACAAACTTGGAACAGGCTGAAAATATTATCAAGGAACACGAGGCCTTCCTCACTACGATGGAGGCTAATGACGATAAGATTAATTCAGTTGTGCAGTTCGCTAATCGCCTCGTCGAGGAGAGGCACTTCGACGCGGACAAGATTCAGCGCAAGGCGGAGAACATCGAGGCACGCCGCAATGCCAACCGCGAAAAGGCACTTAACCTCATGGAGAAGCTCCAAGACCAGCTTCAGTTGCACCAGTTCTTGCAGGACTGCGACGAACTTGGAGAATGGGTTCAGGAGAAGAACGTTACCGCACAAGACGATACCTACCGCTCCGCCAAGACTATCCACTCTAAGTGGACCCGTCATCAGGCTTTCGAAGCTGAAATTGCGGCCAACAAAGAACGACTGTTCGCTGTGCAGAACGCCGCTGAAGAGCTCATGAAGCAGAAACCGGAATTCGTTGAAGTAATTTCGCCCAAGATGCACGAACTCCAAGATCAATTTGAAAACTTGCAGACTACCACCAAGGAGAAGGGCGAGAGGCTCTTCGACGCCAACAGGGAAGTGCTGCTTCACCAAACCTGCGACGACATCGACTCATGGATGAACGAACTTGAGAAGCAAATTCAGAGCACCGATACCGGTAGCGATCTGGCCTCCGTCAATATTCTCATGCAGAAGCAACAGATGATCGAGACCCAGATGGCAGTGAAGGCGAAACAGGTTACGGAACTGGAAACTCAGGCGGAATACCTGCAGAAGACCGTGCCTGACAAGATGGAAGAGATCAAGGAGAAGAAGAAGACTGTTGAGCATAGATTCGAACAACTCAAGGCGCCATTACTCGAACGCCAACGTCACCTTGCCAAGAAGAAGGAAGCCTTCCAGTTCCGTCGTGATGTCGAAGACGAGAAGCTGTGGGTCCAGGAGAAGATGCCCCTGGCCACAAGCACCGACTACGGTAACTCATTGTTCAACGTGCAAATGTTGCAGAAAAAGACTCAGTCGCTGAAGACGGAGACCGACAACCACGAGCCCAGGATTCTGACGGTCATCTCTAACGGACAGAAGCTGATTGACGAGGGACACGAAAGTTCGCCCGAATTCAAACAGCTTATTGACGAGCTCACTGCGAGGTGGCGAGAACTTAAGGATGCCATCGAGGAACGCAAGAACAATCTGTCGCAATGGGAGAAAGCACACCAGTACCTGTTCGATGCGAACGAAGCGGAAGCCTGGATGAGCGAACAGGAACTCTACATGATGGTGGAAGATCGAGGCAAGGATGAGATCTCTGCGCAGAACCTCATGAAGAAACACGAGATTTTGGAGCAAGCTGTCGACGATTATGCACAGACTATCCGTCAATTGGGAGAGACTGTCAGGCAGCTCACCGCCGAAGAACATCCACTCAGTGAACAAATTTCCGTGAAACAATCGCAAGTAGACAAGTTGTATGCAGGACTGAAGGACTTGGCTGGCGAGAGACGAGCCAAACTCGATGAAGCTTTAAGATTATTCCAACTATCCCGCGAGGTCGATGACCTTGAACAATGGATCACAGAGAGGGAACTCGTCGCCAGCAGCCAGGAGCTGGGACAAGACTACGATCATGTCACGCTGCTGTGGGAACGCTTCAAGGAGTTCGCGCGCGAGACCCAGTCGGTGGGCTCGGAGCGAGTCGGCACGGCCGAGCGTATCGCCGACCAGATGATCGCCATGGGACATTCTGACAACGCCACCATCGCGCAGTGGAAGGAGGGCCTCAAGGAAACCTGGCAGGACCTCCTCGAGCTCATCGAGACGAGGACACAGATGTTAGCGGCGTCCCGCGAGCTGCACAAGTACTTCCACGACTGCAAGGACACGCTGCAGCGCGTCAACGAGCGCGCGCGCGGCGTCAGCGACGAGCTCGGCCGCGACGCCATCAGCGTGTCCGCGCTGCAGCGCAAGCACCACAACTTCATGCAGGACCTCACCACGCTGCAGCAGCAGGTGGAGTCCATAAAGAGCGAGTGCTCGCGGCTGGGCGCGTCGTACGCGGGCGAGAAGGCGGCGGAGATCACGCGGCGCGAGCGCGAGGTGGCGGACGCGTGGGCCGCGCTGCAGGCCGCGTGCCGCGCGCGCCGCGCCAAGCTGGAGGACGCCGACCGCCTGTACCGCTTCCTCAGCCAGGTCCGCACGCTCACGCTCTGGATGGACGACGTCGTGCGACAGATGAACACCGGCGAGAAGCCCAGAGACGTGAGCGGCGTCGAGCTTCTGATGAACAACCACCAGTCGCTGAAGGCGGAGATCGACACGCGCGAGGACAACTTCTCGGCCTGCATCTCGCTCGGGAAGGAGCTGCTGGCGCGCCAACACTACGCCTCCGCGGACATCAAGGAGAAGCTACTGCAGCTGACGAATCAAAGGAATGCCCTGCTGCGACGCTGGGAAGAACGCTGGGAGAACTTGCAACTCATACTGGAAGTGTACCAGTTCGCTCGCGACGCGGCCGTGGCGGAGGCGTGGCTCATCGCGCAGGAGCCGTACCTCATGTCGCAGGAGCTGGGGCACACCATCGACGAGGTCGAGAGCCTCATCAAGAAGCACGAGGCCTTCGAGAAATCCGCAGCGGCACAGGAGGACCGGTTCAGCGCTCTGCAGCGACTCACCACCTTCGAAGTGAAAGAGATGAAGCGTCGTCAGGAAGCGGCCGAAGCGGCGGAGCGCGAGAAGCGGGAGCGCGAAGCCGCCGAGGCCGCCGCCGCCGCCGCCGCCGCGCAGGACGCGCTCGACCGCGCCGACACGCCGCACGAGCAGCCCGCCGCCAACGAGGCGAGCTCCGTCCCGAACCCCGCCGCCCTCGCCGCCCCCGCTGACCCCGCCGCCCCCGCACCGCCCTCCCCCCAACAGTCCACGTCGAAACCAACACCGGTTAAACCCGCACGCCTCTCCAAGGGAGCCAGTCCAGCCAGCGAAGATGAAGGGGTCGAGGGAACTCTGGTACGGAAACACGAATGGGAATCCGCCGCCAAACGGGCTTCTAATCGGTCTTGGGATAAGCTTTACGTTGTGGCCAAAGACGGCCGCATGTCGTTCTACAAGGACCAGAAGAGCTACAAGTCGTCGCCGGAACAGTACTGGCGCGGGGAGAGCCCTCTGGACCTCAACGGGGCGGTCGTAGAGGTGGCAGCCAACTACACCAAGAAGAAGCACGTCTTCCGTCTCAGGCTGTCGAGCGGCGCGGAGTTCCTGCTGCAGGCGCACGACGAGGCGGAGATGTCGTGGTGGCTGGAGTCGCTGCGGGCGCGCACGCAGGCGCCGGCCGCGCGCTCGCACACGCTGCCCGCGCCCGCCAACGCCGAGCCCAAGCGACGCTCCTTCTTCACGCTCAAGAAGAACTAA
Protein
MTTDISVSRWDPSVGHGQEIIDEIEYDGGNSSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVGFRIGDLYVDMRDGKMLIRLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLWCQMKTAGYNNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQFEKLHRSNPIHNLNNAFNVAEEKLGLTKLLDAEDIAVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDKMMQEYESLTSDLLQWIERTIEALGDRTFANSLEGVRQQLIQFANYRTVEKPPKFVEKGNLEVLLFTLQSRMRAANQRPYTPREGRMIHDINRAWETLEKAEHERELALREELIRQEKLEQLAARFNRKAQMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVVAVCSELQAERYHDIERVCARRDNVLRLWAYLLELLRARRARLELSLQLQQNFQEMLYILDSMEEIKMRLLTDDYGKHLMGVEDLLQKHALVEADINVLGERVKVVVGQSQRFLEGEGGAYRPCDPAVTVDRIQQLENAYAELVHLAVERRKRLEDSRKLWQFYWDMADEENWIKEKEQIVSVDDIGHDLTTVYLLISKHKALEADVLAHEPQLMSVAAVGDELISQGHFGADRIQERLRDILSQWNHLLDLVSLRKSRLDAAVRYHQLFADADDIDNWMLDTLRLVSSEDTGVDEAQVQSLLKKHKDVTDELKNYANVIQQLKQQAQELSPEDANSGEVRERLAAIDARHGELAELARLRKQRLLDALSLFKLLAEADAADQWIAEKHRMLDTMLPPSDIDDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLVHVEHPQAPRIQDRQHQLNHAWSALREKAEAKKDELKSAQGVQTFHIECRETVSWIEDKKRILQQTDDLEMDLNGVMTLQRRLSGMERDLAAIQARISSLESEASAIENEHPEEAQLIRERVEQITQNWEQLTHMLKERDSKLEEAGDLHRFLRSVDHFQAWLTKTQTDVASEDIPSSLPEAEKLLSQHQTIKEEIDNYKDEYAKMMEYGEKITAEPSTQDDPQYMFLRERLKALREGWAELQQMWENRQQLLAQSLELQLLQRDARQAEVLLAHQEHRLAKTEPPTNLEQAENIIKEHEAFLTTMEANDDKINSVVQFANRLVEERHFDADKIQRKAENIEARRNANREKALNLMEKLQDQLQLHQFLQDCDELGEWVQEKNVTAQDDTYRSAKTIHSKWTRHQAFEAEIAANKERLFAVQNAAEELMKQKPEFVEVISPKMHELQDQFENLQTTTKEKGERLFDANREVLLHQTCDDIDSWMNELEKQIQSTDTGSDLASVNILMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIKEKKKTVEHRFEQLKAPLLERQRHLAKKKEAFQFRRDVEDEKLWVQEKMPLATSTDYGNSLFNVQMLQKKTQSLKTETDNHEPRILTVISNGQKLIDEGHESSPEFKQLIDELTARWRELKDAIEERKNNLSQWEKAHQYLFDANEAEAWMSEQELYMMVEDRGKDEISAQNLMKKHEILEQAVDDYAQTIRQLGETVRQLTAEEHPLSEQISVKQSQVDKLYAGLKDLAGERRAKLDEALRLFQLSREVDDLEQWITERELVASSQELGQDYDHVTLLWERFKEFARETQSVGSERVGTAERIADQMIAMGHSDNATIAQWKEGLKETWQDLLELIETRTQMLAASRELHKYFHDCKDTLQRVNERARGVSDELGRDAISVSALQRKHHNFMQDLTTLQQQVESIKSECSRLGASYAGEKAAEITRREREVADAWAALQAACRARRAKLEDADRLYRFLSQVRTLTLWMDDVVRQMNTGEKPRDVSGVELLMNNHQSLKAEIDTREDNFSACISLGKELLARQHYASADIKEKLLQLTNQRNALLRRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSQELGHTIDEVESLIKKHEAFEKSAAAQEDRFSALQRLTTFEVKEMKRRQEAAEAAEREKREREAAEAAAAAAAAQDALDRADTPHEQPAANEASSVPNPAALAAPADPAAPAPPSPQQSTSKPTPVKPARLSKGASPASEDEGVEGTLVRKHEWESAAKRASNRSWDKLYVVAKDGRMSFYKDQKSYKSSPEQYWRGESPLDLNGAVVEVAANYTKKKHVFRLRLSSGAEFLLQAHDEAEMSWWLESLRARTQAPAARSHTLPAPANAEPKRRSFFTLKKN

Summary

Similarity
Belongs to the spectrin family.
EMBL
RSAL01000035    RVE51333.1    GDQN01009940    GDQN01005007    JAT81114.1    JAT86047.1    + More
KQ459604    KPI92466.1    AGBW02010317    OWR48743.1    NEVH01006564    PNF37986.1    PNF37985.1    PNF37984.1    PNF37982.1    PNF37988.1    PNF37981.1    PNF37983.1    PNF37989.1    KK852804    KDR16227.1    KQ981979    KYN31389.1    GL442629    EFN63222.1    ADTU01001618    KQ976398    KYM92779.1    QOIP01000009    RLU19125.1    KQ980612    KYN15088.1    KK107519    EZA49374.1    GL453780    EFN75525.1    NNAY01000039    OXU31669.1    KQ982585    KYQ54373.1    GEDC01015420    GEDC01011368    JAS21878.1    JAS25930.1    GEDC01019912    GEDC01018981    JAS17386.1    JAS18317.1    GBYB01011167    JAG80934.1    GEDC01025136    JAS12162.1    DS231900    EDS44827.1    KQ435007    KZC13483.1    GFDL01007749    JAV27296.1    GFDL01007748    JAV27297.1    GANO01002441    JAB57430.1    GFDL01007756    JAV27289.1    GFDL01007855    JAV27190.1    GGFK01000575    MBW33896.1    GGFK01000535    MBW33856.1    GBGD01000024    JAC88865.1    GFTR01008963    JAW07463.1    KQ770827    OAD52591.1    CH477362    EAT42646.1    GDKW01000285    JAI56310.1    GECL01003526    JAP02598.1    GGFK01000528    MBW33849.1    ADMH02001220    ETN63607.1    GBBI01002234    JAC16478.1    GGFM01000253    MBW21004.1    GGFJ01000066    MBW49207.1    GGFL01002161    MBW66339.1    GGFJ01000065    MBW49206.1    GL762556    EFZ21222.1    GFDL01007736    JAV27309.1    GFDF01000139    JAV13945.1    ATLV01016991    KE525139    KFB41709.1    AAAB01008823    EAA05634.3    APCN01003435    KQ971338    EFA01607.2    GEZM01081251    JAV61736.1    AXCN02001762    GGFL01000142    MBW64320.1    AXCM01008530    GBHO01003052    GBRD01014085    JAG40552.1    JAG51741.1    GBRD01014086    GDHC01017241    JAG51740.1    JAQ01388.1    GBRD01014084    JAG51742.1    GBHO01003045    JAG40559.1    GBHO01003047    JAG40557.1    GBRD01014083    JAG51743.1    GAKP01011465    GAKP01011464    JAC47488.1    GDHF01030988    GDHF01022939    GDHF01022145    GDHF01014185    GDHF01009959    GDHF01000114    JAI21326.1    JAI29375.1    JAI30169.1    JAI38129.1    JAI42355.1    JAI52200.1    JRES01000510    KNC30495.1    ACPB03018627    GBXI01017246    GBXI01016962    JAC97045.1    JAC97329.1    DS235271    EEB14212.1    GAMC01016135    JAB90420.1    LJIG01009657    KRT82642.1    GAMC01016136    JAB90419.1   
Pfam
PF15410   PH_9        + More
PF00435   Spectrin
PF00307   CH
PF15902   Sortilin-Vps10
PF00058   Ldl_recept_b
PF00057   Ldl_recept_a
PF15901   Sortilin_C
PF00041   fn3
Interpro
IPR001849   PH_domain        + More
IPR001589   Actinin_actin-bd_CS       
IPR011993   PH-like_dom_sf       
IPR041681   PH_9       
IPR002017   Spectrin_repeat       
IPR016343   Spectrin_bsu       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
IPR018159   Spectrin/alpha-actinin       
IPR001605   PH_dom-spectrin-type       
IPR006581   VPS10       
IPR011042   6-blade_b-propeller_TolB-like       
IPR000742   EGF-like_dom       
IPR023415   LDLR_class-A_CS       
IPR031777   Sortilin_C       
IPR000033   LDLR_classB_rpt       
IPR031778   Sortilin_N       
IPR002172   LDrepeatLR_classA_rpt       
IPR036116   FN3_sf       
IPR036055   LDL_receptor-like_sf       
IPR003961   FN3_dom       
IPR013783   Ig-like_fold       
SUPFAM
SSF47576   SSF47576        + More
SSF57424   SSF57424       
SSF49265   SSF49265       
PDB
6ANU     E-value=2.02782e-111,     Score=1036

Ontologies

Topology

Subcellular location
Golgi apparatus  
Length:
2323
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00845999999999998
Exp number, first 60 AAs:
0.00038
Total prob of N-in:
0.00046
outside
1  -  2323
 
 

Population Genetic Test Statistics

Pi
285.605821
Theta
178.775471
Tajima's D
1.868076
CLR
0.143998
CSRT
0.864606769661517
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 FAAGNRDTVEVKNRKYNAASSESSYLNKDNDSISAGAHRAKSVEQSQDKSKYTSGPEGVSYSGRSQNYKDSKQAYADYHSDPNGGSASAGQSRDSSLRERNVHYVSDGEAVAASSDARDENRSAQQNAQANWNADGSYGVSADRSGSASSRRRQANYYSDKDITAASKDDSRADSSRRSNAYYNRDSDGSESAGLSDRRA 100.00 0.0
31250652 IILPLTADIGHQVAITEPKLFITAAECYDNVRKALKFAKSDAKIVLIDDQSSPIPSGTIRYSELAEKAEIDNGVLDKIEKSDDDVACIPFSSGTTGMPKGVEITYRNLIAGMVCMHMKENCFPQLATGELHIFFIFFYCLYVSTSSQSTWC 97.03 9e-63
31250652 LRSVFRYDGFDKEMNANASRVAVVNQLARQLVHVEHPQAPRIQDRQHQLNHAWSALREKVRTARNDLARTAIYRVLRELLFRSMSKYY 100.00 8e-43
31250652 RYFFVEQEMLYILDSMEEIKMRLLTDDYGKHLMGVEDLLQKHALVEADINVLGERVKVKDILIT 100.00 2e-30
31250652 RVWVVQVVVGQSQRFLEGEGGAYRPCDPAVTVDRIQQLENAYAELVHLAVERRCVPQYPLRQFFFLGFYDLVTKTFKSCFILILIIMKNDNME 100.00 2e-28
31250652 LLHRFNRKAQMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVVAVCSELQAERSLFVSL 96.23 1e-27
31250652 ILIQQTVVRNIGDGDTLVNGEPVSVAALKHYDVITLGDRSLRWHYDNPNISKKFQKIEQGMILLIMKFLKNIISKYSFP 95.52 5e-27
31250652 CMFFYYLKMLAASRELHKYFHDCKDTLQRVNERARGVSDELGRDAISVSALQRKHHNFMQDLTTLQQQVPRLT 100.00 6e-25
31250652 SVNVLFFKIQDITIEETDNKETKSAKDALLLWCQMKTAGYNNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQFEKLHRSNPIHNLNNAFNVAEEKLGLTKLLDAEGQLRVLFFFFASMSGRAHSPPGVKWLLEPLDIYDVNAPPTLRYKFQGLCIVTAAVPPFKPKRATASRQK 95.45 8e-21
26822097 TTDISVSR 100.00 3e-11
28467696 WDNEEYWQQAEGK 100.00 3e-11
31250652 IQQLENAYAELVHLAVER 100.00 8e-09
31250652 QLIDELTAR 100.00 4e-08
28556443 TLTLWMDDVVR 100.00 7e-07
26822097 SNPIHNINNAFNVAEEK 100.00 2e-06
26280517 IAAAPVVAAPVAK 100.00 2e-06
28467696 IADPEEACHPSPCGPNTK 100.00 2e-06
28556443 SVDHFQAWLTK 100.00 2e-06
31250652 MHELQDQFENLQTTTK 100.00 7e-05
31250652 NYANVIQQLK 100.00 9e-05
28556443 IQQLENAYAELVHLAVER 100.00 9e-05
31250652 DGLAFNAIIHK 100.00 1e-04
31250652 LVSSEDTGVDEAQVQSLLK 100.00 2e-04
28556443 IHCLENVDK 100.00 2e-04
28556443 NYANVIQQLK 100.00 4e-04
28556443 LLDALSLFK 100.00 4e-04
26822097 IISQHQTIKEEIDNYKDEYAK 100.00 7e-04
31250652 TEPPTNLEQAENIIK 100.00 0.001
28556443 DGLAFNAIIHK 100.00 0.005
28556443 DGLAFNAIIHK 100.00 0.005
28556443 VVGIAMENDK 100.00 0.009
26822097 IADQMIAMGHSDNATIAQWK 100.00 0.021
26280517 YCAYNIGDESAAGDIMAMR 100.00 0.021
31250652 QLVHVEHPQAPR 100.00 0.021
28467696 YDFYIVSQNVR 100.00 0.021
31250652 QVTELETQAEYLQK 100.00 0.034
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