Gene

KWMTBOMO11040

Annotation

DnaJ_(Hsp40)_homolog_13_[Bombyx_mori]

Location

Bomo_Chr18(-):10705322-10712253      View in EpiBrowser

Full name

DnaJ-like protein 60      

Location in the cell

Extracellular   Reliability : 1.082 Mitochondrial   Reliability : 1.245 Nuclear   Reliability : 1.313

CDS

ATGTTTTTTATAAAACGAAATTCTGACTTCAAGTCTTTAAATGGGTTTATAAGATTTTACAGCTTTGGACGAAGGTGTCATTATGATGTTCTTAATTTGCGTAGAAATTGTTCCGACAAAGAAATCAAAAATGCATTCATTCAGTTAAGTAAAGAATATCATCCAGACAAGAATAAAGATGCAAAAGCACAAGAGAGATTTGTCCAGATTGTTGAAGCGTATAATATTCTTGGCAAACCAGGCACCAGAGCTCAATATGACAGCATAACTGAAGTTTCAACTGGACCCAATTCTTACGTTTATAAAACTCATGTGCCTTATAATCTACGTAAAAATGCACAGTACAGTTACTACTATGATTTCGGATCCAAAGCACATAGTGCGAAAGGAAATACAAACACATATTATAGTAATGAGAGTGCCAAGAAAATGCCCAATTATTATATAATTTTCACATGTATCGGTATCACCTTACTTGGTGCTATCCTGCAAGGATATGTAATAAGAAACATGTATGTCGGTCAGCGCAAGCAAGCATTACAGAAGTCAATGGAACTTGCTGATGAACTCGATAAAGTAAGGGCAGCCGCTACTGGTAACGGAAATGAGATGCAAACTCGATTGCTGTTAGACAAGATCGTAACCGCCTCCAACGCCACGGTGGCCACTGCGTCACTTGGTCACGCACTAGCAACGGACAAAAAAAATATTTCGGAAACGTTCGTTCCAGAATATGGAATTGCAGACGCGACAGAGGACTATTCTTATGAATGTTCAATAAATAATGACTTGAAGTTACTAAGTGAACTTTTGCAGAAAATTATGGAATACTTGGAATAA

Protein

MFFIKRNSDFKSLNGFIRFYSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYDSITEVSTGPNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTNTYYSNESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELADELDKVRAAATGNGNEMQTRLLLDKIVTASNATVATASLGHALATDKKNISETFVPEYGIADATEDYSYECSINNDLKLLSELLQKIMEYLE

Keywords

Chaperone   Complete proteome   Developmental protein   Differentiation   Membrane   Reference proteome   Spermatogenesis   Transmembrane   Transmembrane helix  

Feature

chain  DnaJ-like protein 60

Uniprot

Q2F6B4   A0A2H1WRP1   A0A194PGP5   A0A0N1INV2   A0A212F180   A0A139WJH0   + More
A0A336MIM9   A0A1W4WIT7   A0A1S4H340   A0A182VI55   A0A182XB74   A0A182HQW3   A0A084WG97   A0A182R7P3   A0A182WA44   A0A1B0CR54   A0A182FN48   A0A0A9W272   B4PAV6   B3NQG1   Q9W1A1   P92029   A0A0J9RKE6   B4I2E5   A0A0Q9X8E9   A0A182JWH9   A0A2T7NWU3   B4KNV6   A0A0K8UMG7   A0A2J7PC22   A0A034WP18   A0A0K8VEU4   A0A0K8TSR0   A0A1B0FGA3   A0A034WSJ5   A0A0L0CQV8   T1IG94   A0A0P4W083   A0A226EVR0   A0A1B0AWQ5   B4J8C9   A0A1A9X928   B3MDN5  

Pubmed

26434795    26354079    22118469    18362917    19820115    12364791    + More
24438588    25401762    26823975    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    9372188    22936249    25348373    26369729    26108605    27129103   

EMBL

DQ311158    FJ592086    FJ592088    JN872888    ABD36103.1    ACT34047.1    + More
ACV41274.1    ODYU01010518    SOQ55677.1    KQ459604    KPI92472.1    KQ460813    KPJ12136.1    AGBW02010931    OWR47500.1    KQ971338    KYB28021.1    UFQS01001084    UFQT01001084    SSX08898.1    SSX28809.1    AAAB01008980    APCN01001605    ATLV01023494    KE525344    KFB49241.1    AJWK01024414    GBHO01041072    GBRD01016743    GDHC01016103    JAG02532.1    JAG49084.1    JAQ02526.1    CM000158    EDW92496.1    CH954179    EDV56964.2    AE013599    BT128828    AAF47173.3    AEM92659.1    Y11900    CM002911    KMY96282.1    CH480820    EDW53940.1    CH933808    KRG04413.1    PZQS01000008    PVD25622.1    EDW09001.1    GDHF01024405    JAI27909.1    NEVH01027072    PNF13883.1    GAKP01001656    JAC57296.1    GDHF01014840    JAI37474.1    GDAI01000442    JAI17161.1    CCAG010011116    GAKP01001655    JAC57297.1    JRES01000032    KNC34755.1    ACPB03006809    GDKW01000334    JAI56261.1    LNIX01000002    OXA61174.1    JXJN01004888    CH916367    EDW02288.1    CH902619    EDV37498.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000007266    UP000192223    UP000075903    + More
UP000076407    UP000075840    UP000030765    UP000075900    UP000075920    UP000092461    UP000069272    UP000002282    UP000008711    UP000000803    UP000001292    UP000009192    UP000075881    UP000245119    UP000235965    UP000092444    UP000037069    UP000015103    UP000198287    UP000092460    UP000001070    UP000092443    UP000007801   

PRIDE

Q2F6B4    Q9W1A1    P92029   

Pfam

PF00226   DnaJ

Interpro

IPR036869   J_dom_sf        + More
IPR001623   DnaJ_domain       
IPR018253   DnaJ_domain_CS       

SUPFAM

SSF46565   SSF46565       

Gene 3D

1.10.287.110    

CDD

cd06257  DnaJ

ProteinModelPortal

Q2F6B4   A0A2H1WRP1   A0A194PGP5   A0A0N1INV2   A0A212F180   A0A139WJH0   + More
A0A336MIM9   A0A1W4WIT7   A0A1S4H340   A0A182VI55   A0A182XB74   A0A182HQW3   A0A084WG97   A0A182R7P3   A0A182WA44   A0A1B0CR54   A0A182FN48   A0A0A9W272   B4PAV6   B3NQG1   Q9W1A1   P92029   A0A0J9RKE6   B4I2E5   A0A0Q9X8E9   A0A182JWH9   A0A2T7NWU3   B4KNV6   A0A0K8UMG7   A0A2J7PC22   A0A034WP18   A0A0K8VEU4   A0A0K8TSR0   A0A1B0FGA3   A0A034WSJ5   A0A0L0CQV8   T1IG94   A0A0P4W083   A0A226EVR0   A0A1B0AWQ5   B4J8C9   A0A1A9X928   B3MDN5  

PDB

4J80     E-value=1.85204e-10,     Score=156

KEGG

692803    K09524 DnaJ homolog subfamily C member 4 | (RefSeq) DnaJ-13, DNAJ13; DnaJ (Hsp40) homolog 13

GO

GO:0016021   GO:0007283   GO:0007275   GO:0051082   GO:0006457   GO:0030154   GO:0016020  

Subcellular location

Membrane  

Length:

279

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.00307

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.52934

inside

1  -  145

TMhelix

146  -  168

outside

169  -  279

 

 

Pi

182.979831

Theta

174.031252

Tajima's D

0.865595

CLR

1.446681

CSRT

0.625068746562672

Interpretation

Uncertain