Silkworm Genome Informatics Database

Gene

KWMTBOMO11034

Pre Gene Modal

BGIBMGA008537

Annotation

PREDICTED:_zinc_finger_CCCH_domain-containing_protein_14_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr18(+):10570944-10588428 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.179

CDS

ATGGACGTCGTAGGAAGTGAAATAGGCCAGAAAATGCGGTCTGCTATCAAGGCTAAGCTGACCGAACTGGGCTGTTATGTAGATGATGAGCTACCCGACTATGTCATGGTGATGGTAGCAAACAAGCGCACTCGTGGGCAGATGGAAGAAGATCTTCAATTGTTCCTTGGAGACAATACTGAACTCTTTGTGAATTGGCTTCACCAAGTTCTCAAAAAGCTACAACAAGTTTCAGTCACTGCCCCAATAACAGTTGAAAGAGAGAAGAGCAAAGAAAGATCCGTGTCCAAAGACCGCAAGCCGAAAGAAAAGAAAGCAAAAGAAAAATCGAAAAAGAGTGACTCAAAAAAATCCAAAAAGAAAGTTAAAGAAAAAGAAATTCATAAGAAAGAAATCAAGAAAGCTCACAAGAAAAAGAAAAGCAAACATCACGATATAATAAGACCAAATATACCTCCATTGCTGATGAACATGGAAAAGAATTCAGAGCCATCAATAACTGATGTCTTTGCTGGCCAGATACTAAAAAACCACGGTGTATTAATAGAACCACAAAGCCAGGATGAAAAAAATGAAACTAAGTCTACAGTTAAAGAAAGCAAAAAGCCAGTCGTACCTGTAATTGATTTAGCAACAATTTCATCTGAACAAAATCTTTCTTCTACATCTGAATCTACTAAGATTGTGGAAGAAGTGGTTGAAAAATCAACGGAATCGTCTGCGAATAGAGATGAACAAATTAAAGAAATCAATGAGATTGAAGTCAAAATACAGGGACTAAAGCAAAAATTAGTGGAACAGTTGGATTCTATGTCAGATGATGATGAAGACTTTTTAAATATAAGGACGGAAGCTGATGAGCTAATGAATGATTTTGCCGATGAAGTCTTTCAGGAAGTCTCACAGTCCATCCCAAAGACTCCACCGCTGCAAAAGAAACTTACATCACCACGGAAAATGGTTGAACCTGTTCCCCCTACTCCAAATCGCAGTGCAGAAACTGTTGAATTGTTACCCCAATTTGAACTAAAGCTACCCAAGAGGCCTGCAAGAGATCGAATTAGTAGAGATATAACCAGAAAGGTCGAATCTAAAGAGACAGAGAAAAAACAGAAGAGTCCGGAAAGGTTCACACCAGAACCGGAACCACCTCAAAAACCAACAAAGATTACATACAACGATCAGCCTGCATCCCAAAAAAGGAAGTCAGACTCCGATGAAGCAGGTCAACGTAATACTGAAAGTAGTTCTAAAAAGATCACTTCCAGAATATCGGTGTTGGAGAATCGTCCTGTCCGTTCGTCGTGCACAAGCGTAGTGCGGGTGCGCCCGCGGCCGCGTGTCGCCGCCACTGCCTCCAGCCTGCTCATGAAAGCCGTAGCTGATGCTCATAAGAGCTTATTAAATATTCCCCCTAAAATAGAAGCGGATTCACAGAAAGTGAAACGGGCCCTAGTACTGCCCATGCGTCGGATGGACGCGCAGAACATTGTCATCCAAGTGCCGGCGGGCGGTCCCGCTGCCGATGCTGACGATGCTGACAGGAACGCTGACGTCATAAGCCTCGAAATGGACAGCAATGATGATGAGAGCTCCAGAGCGCCGAGTGACGTTGACAAAGAAGAGTATGTACCGGCTTCGATAACGAAGAAAATAAAAAACACCGAATACGTACCTTCGAGGCGATTCGAAGGAAGGATCTCCACGAAAAAAAACGACACGCTTATCATTGAAACAATAAATATTCACAATCCAACCGTAGACAAAGACAAAAGTACGCAGTTCATAGTCACTATGGACGGTTACCATCCGAACTCGTTTTTGAAAAAGAAACTTCTCGACGAGGGCATCTTGAACGATGAAGAAGCCAATAAAACGAAAGAATCCAAAGAACCTCCAGTGGAAGCTAACGTTACTAAAGAAGAAAAATCAGACGAAATTGAACTTGAACCCGCTGAAAATACAGACGAAGATACGCCAGTAAAACGTCTCAGTGCTACAAAAGATGACGCGACAGAAGCCAAGATAAAAACCGAAGAAGTACTCGCTAAAAGGATAACCACGGAAATGCTAAAAGATCTGTCGCCTCCTGTTAGGAAAAGAAAGGCCTCTCCTATTGTATTCGACGTGTCGAAGAAAGAGAAAGTCGTCGAAAAAGAAGAGAGACAGAGAACGGAAAGTGCCAGTAGTGACAGTCATATCGTGGTCACCACTAATAACACACATAAATACGATGCAGTTCCACCACTGTCCCAAGCGGAACGCAAGCCGATATGGTGCAAGGCGTTCCCGATGTGTAGATACGGCTCGACGTGCGCCTTCATACACCCGCGCTGCAAGTTCGCCGCGAGCTGCACGCGACGGAACTGCGTTTACTCGCACCTGCCGGGCGCGCCCTTGCCACTGACAACGCCATCTGTCGCGTCCCACGTGATCCCGGTCGCGAACTACAAGTCGATATCGTCTGTGGCCGTCCCGGGCATGTGCAAGTTCTACCCGGGCTGCGTGAATCCAATGTGCCACTTCTACCACCCAAAGCCCTGCCGCTTCGGGAAAAACTGCACAAACAAACTTGAATGTAATTTTTATCATAGTGATGTACCTAAATGGAAGTATTGTGTATAA

Protein

MDVVGSEIGQKMRSAIKAKLTELGCYVDDELPDYVMVMVANKRTRGQMEEDLQLFLGDNTELFVNWLHQVLKKLQQVSVTAPITVEREKSKERSVSKDRKPKEKKAKEKSKKSDSKKSKKKVKEKEIHKKEIKKAHKKKKSKHHDIIRPNIPPLLMNMEKNSEPSITDVFAGQILKNHGVLIEPQSQDEKNETKSTVKESKKPVVPVIDLATISSEQNLSSTSESTKIVEEVVEKSTESSANRDEQIKEINEIEVKIQGLKQKLVEQLDSMSDDDEDFLNIRTEADELMNDFADEVFQEVSQSIPKTPPLQKKLTSPRKMVEPVPPTPNRSAETVELLPQFELKLPKRPARDRISRDITRKVESKETEKKQKSPERFTPEPEPPQKPTKITYNDQPASQKRKSDSDEAGQRNTESSSKKITSRISVLENRPVRSSCTSVVRVRPRPRVAATASSLLMKAVADAHKSLLNIPPKIEADSQKVKRALVLPMRRMDAQNIVIQVPAGGPAADADDADRNADVISLEMDSNDDESSRAPSDVDKEEYVPASITKKIKNTEYVPSRRFEGRISTKKNDTLIIETINIHNPTVDKDKSTQFIVTMDGYHPNSFLKKKLLDEGILNDEEANKTKESKEPPVEANVTKEEKSDEIELEPAENTDEDTPVKRLSATKDDATEAKIKTEEVLAKRITTEMLKDLSPPVRKRKASPIVFDVSKKEKVVEKEERQRTESASSDSHIVVTTNNTHKYDAVPPLSQAERKPIWCKAFPMCRYGSTCAFIHPRCKFAASCTRRNCVYSHLPGAPLPLTTPSVASHVIPVANYKSISSVAVPGMCKFYPGCVNPMCHFYHPKPCRFGKNCTNKLECNFYHSDVPKWKYCV

Uniprot

A0A2H1VYH5 A0A194PMX5 A0A0N1ID80 A0A2A4K0U8 A0A212ETG6

Pubmed

26354079 22118469

EMBL

ODYU01005222 SOQ45868.1 KQ459604 KPI92475.1 KQ460813 KPJ12133.1 + More
NWSH01000269 PCG77867.1 AGBW02012587 OWR44786.1

Proteomes

UP000053268 UP000053240 UP000218220 UP000007151

Interpro

IPR040366 Nab2/ZC3H14 + More
IPR000571 Znf_CCCH

ProteinModelPortal

A0A2H1VYH5 A0A194PMX5 A0A0N1ID80 A0A2A4K0U8 A0A212ETG6

PDB

4LJ0 E-value=0.00248496, Score=100

KEGG

101737780 K23038 zinc finger CCCH domain-containing protein 14 | (RefSeq) zinc finger CCCH domain-containing p

GO

GO:0008143 GO:1900364 GO:0043488 GO:0046872 GO:0007186 GO:0016021 GO:0008152 GO:0016787 GO:0042626 GO:0016887 GO:0005622 GO:0006810 GO:0003824

PANTHER

PTHR14738

Length:

874

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00524

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.00003

outside

1 - 874

Pi

229.111956

Theta

166.325913

Tajima's D

1.457189

CLR

0.332334

CSRT

0.779211039448028

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics