SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11031
Pre Gene Modal
BGIBMGA008322
Annotation
PREDICTED:_G-protein_coupled_receptor_moody-like_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 4.772
 

Sequence

CDS
ATGGGCGATCTATTCCCGAGTATACCGAAGAGTACTTTCGCGAGTGTCACAGAGGGGGGGAATTATAGTGGGGGTAGAATTCTGGGACTGGACGAGTACAGATCGGACGCGGAGTTGGCTGACGTGGAACTGTTCAAGGATTACCCGGAGCCTCTGCTGAGATTCGCTTCGGCATGCTGCGTACTTTTTATGCTGGTCGGCATTCCTGGAAACCTGATTACTATCATCGCGCTCGCACGATGTAAAAAGGTGCGAAACGCTACAGCGGTGTTTATTATGAATCTATCGTGCTCTGACCTTCTGTTTTGCTGCTTCAATCTACCACTTGCTGCATCAACCTTCTGGAGGCGATCGTGGGCCCATGGGAAAACTTTATGCAGAATGTTTCCATTGGCGCGATACGCACTGGTGGCCGTATCACTCTTCACCGTTTTAGCTATCACTATCAACAGATACGTAATGATCTCTCATCCAAGGCTATACCCCAAGTTGTACCGTCGTAAATATTTGGCGATTATGGTGGGAAGCACCTGGGCATTCTCCTTCGGAGCCCTTATAGCGACGTGGTTAGAAAAATGGGGACGTTTCGGCCTTGACCCCTCAATCGGCTCGTGCTCTATACTTCCAGACCGCAATAATCGATCTCCGAAAGAATTCCTGTTTGTCGGCGCTTTCATGCTTCCTTGTCTAGCAATCGTGATTTGCTATGCGAGGATATTTTGTATAGTACGCGACGCAGCGAGAAAGTCCCGGGCACCGGTTCGTCGGACCAGACCTGCTCTAGAAGATTCTGCCGTTGGGTCGGCATCGACAGCCTTAGAGCGATCACCCGGACCGGAAAATGGAGTTACGCACCACAATCATAATTCGGCACCTAAACGAGCGTTACTTGCACCCCCAGCCCTACACTATCCTCCAACACCAGGACCAGAACGGTCTTCCTCCTCGGGTGTAGATACTCTAGATGGACACGACGAAGAATGCGCCCTCGATGCCAAACCCCGAACCCCGAGCGGCAGTGAAACTTCGAAACGGCTCAAACAAGCTGCGACCGCTTTAAAAAAATCGCCAGCCTCAGTGCGACCGCCTCGTCTAACAACCAAAGACAGGAAACTTCTCAAAATGATCATGGCGATTATGTTATCGTTTTGGGTGTGCTACCTACCAATAACATTGACGAAAATATTTCGAGAATTCACATCGCATCCTGCCGCGAACATCGCCGGCTACATCCTAATATACCTAACAACGTGCATCAATCCTATAATATACGTAGTGATGTCCAGTGAGTACCGTCAGGCGTACAAGAACCTGCTTATGTGTCGTCGCTGGGCGTGA
Protein
MGDLFPSIPKSTFASVTEGGNYSGGRILGLDEYRSDAELADVELFKDYPEPLLRFASACCVLFMLVGIPGNLITIIALARCKKVRNATAVFIMNLSCSDLLFCCFNLPLAASTFWRRSWAHGKTLCRMFPLARYALVAVSLFTVLAITINRYVMISHPRLYPKLYRRKYLAIMVGSTWAFSFGALIATWLEKWGRFGLDPSIGSCSILPDRNNRSPKEFLFVGAFMLPCLAIVICYARIFCIVRDAARKSRAPVRRTRPALEDSAVGSASTALERSPGPENGVTHHNHNSAPKRALLAPPALHYPPTPGPERSSSSGVDTLDGHDEECALDAKPRTPSGSETSKRLKQAATALKKSPASVRPPRLTTKDRKLLKMIMAIMLSFWVCYLPITLTKIFREFTSHPAANIAGYILIYLTTCINPIIYVVMSSEYRQAYKNLLMCRRWA

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
Pfam
PF00001   7tm_1
Interpro
IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
PDB
6ME7     E-value=1.99462e-18,     Score=227

Ontologies

Topology

Length:
445
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
154.07494
Exp number, first 60 AAs:
6.40877
Total prob of N-in:
0.00090
outside
1  -  53
TMhelix
54  -  76
inside
77  -  88
TMhelix
89  -  111
outside
112  -  130
TMhelix
131  -  153
inside
154  -  168
TMhelix
169  -  191
outside
192  -  219
TMhelix
220  -  242
inside
243  -  371
TMhelix
372  -  391
outside
392  -  405
TMhelix
406  -  428
inside
429  -  445
 
 

Population Genetic Test Statistics

Pi
172.951741
Theta
151.939114
Tajima's D
0.383285
CLR
0.082363
CSRT
0.47617619119044
Interpretation
Uncertain
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