Gene

KWMTBOMO11028

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like?_partial_[Polistes_dominula]

Location

Bomo_Chr18(-):10201251-10203668      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.759

CDS

ATGTCAGCAAAAAGTTCAAAGAAACGTCCAAAAATACGCTTGTTCGACGATTTTTCATCAAATTCGCCATCTGAAGCAGATTTAGATCCCTTCGAGGATAATGACGGTGATTATGGTTCTGACACGAACTATGAACCACAAAATATAGAAGAAACTGGTGCATCCAGTTCATCAGAGGAAATATTTTCTATAAGACCTCGTCGAATTATATCTGGAGGCCCTGTGGCTTCATCGGATTCAAGTAAGTCTGATATCTCAATTAGAAGTTCAGATTCTGATCAGGACGATAGAACTATCGAAAATGCTGAACCGATTTCCGAATCAGTAGACGACTTACCATCCCTTCTTATATCTCAACATGACAATGATATAGATTCAGAACCAGTGCAAAATCGGATAAGATCTCCTGTACCAGAGGAGATACCGTGGTTACATAGCACAGAAGAAATACCTGATTTTGAATTCGATGTCGAGTCATATGGCGTTCAGTTTGACGTTACCTCTCAGACTAGCATTGAACAAATTTTCGATCACGTGTTTCCAAAAGAGTTACTCGAGTACCTGGTCCAGTGTACTAATAATTATGGTACAGCTTTGTGTCAGTCAAACAAACCGTCAACCCGATATTCCCGGTCTCAAAATTTTCGAAATACTACGACTGTTGAGATGAAAAAGTTTCTTGGACTTTCGTTATTACATGGACATATTCGCACTCCTAAACAACAAAAACTATTTACTTATGATGATCCACTATATTATCATCCTGTGTTCTCATATACAATGTCTTCGCGGCGATATGAACAGATACTTCGATGTATATGTTGTTCAGAACTGGATGCAAAAGGCGCAGAAAAGATTAACAAATTTGTTGATTTGTTGACATTGAATTTTAGAAAGATATACAAACCTGATAAAGAGCTTAGTTTAGATGAATCTTTACTATTGTATCGAGGCCGACTTCACTTTCGGCAGTACATAAAGTCCAAAAAAGCAAGATATGGGATTAAATTCTATGTCTTGGCAACGGCTGATGGTTATGTTCTTAATATAATAATGTATAGCGGAAAAGACGAGAATACCCAATTGAGAGGTGTAACGAAGCTTGAACGGTTGGTAATGCGATTGATGAGACCGTTTTTATTGAAAGGACATCACCTCTTCATGGATAATTACTACAATTCGGTCACTCTTTCTCAGAAACTTTTTGATTTGAAAACCCATACAAATGGTACTCTTCGTGTTAATAGAAAAGATAATCCAAAGGAAGTAGTGGACAGAAAATTAAAAAAAGGTGATCATGTTTGGGTAAGGAAAAATAAAGTGTATGTTAGCAAATGGGTTGATAAGCGACCAGTGATTATGTTGACCACTAGAGAACACCCCCGTATTATAGAAACAACAAACAGGTTTGGGAAAATAGTTAAGAAGCCTATTGAAGTAGCAACATATAATAAATACATGTCCGGTGTAGATAGGTCTGACCAGATGATAAGTTACTATTCTTCGCCGAGGAAAACTATACGCTGGTACAAAAAAGTACTTTTTCATCTTTTGGATACCGCTGTATGGAATTCCTATTACTTATACAAGAAATTTGTACTGAAAAACCCAAAATATGAGTTATCTTCATATCGGGAGGAGTTAATAAAAAAATTAATAGATTTGAAAGAAAACTGTAAGGGTAAAGATTTAGTATTAGATTTAAAAAAACACAATAGCAGAAAACACAATAACCCCCAAAAGAACATATTTGCAGATCAAGAACGAAAATTTTGGGGTCATTGGCCCAAACGCCAACCTGCACCTGAAAATTCTAAGAAAAAATACTCATTTCTGATGTGTAAAATGTGTTCCAAGAATAAGAAGAGGGTCGAAACTAGCTACAGGTGCATTGGTTGTCCAGGACTTCCTCCATTATGTCCTGAATGTTTCCAGGATTATCACCAAATTCTTGAACAGCAAGAACAATAA

Protein

MSAKSSKKRPKIRLFDDFSSNSPSEADLDPFEDNDGDYGSDTNYEPQNIEETGASSSSEEIFSIRPRRIISGGPVASSDSSKSDISIRSSDSDQDDRTIENAEPISESVDDLPSLLISQHDNDIDSEPVQNRIRSPVPEEIPWLHSTEEIPDFEFDVESYGVQFDVTSQTSIEQIFDHVFPKELLEYLVQCTNNYGTALCQSNKPSTRYSRSQNFRNTTTVEMKKFLGLSLLHGHIRTPKQQKLFTYDDPLYYHPVFSYTMSSRRYEQILRCICCSELDAKGAEKINKFVDLLTLNFRKIYKPDKELSLDESLLLYRGRLHFRQYIKSKKARYGIKFYVLATADGYVLNIIMYSGKDENTQLRGVTKLERLVMRLMRPFLLKGHHLFMDNYYNSVTLSQKLFDLKTHTNGTLRVNRKDNPKEVVDRKLKKGDHVWVRKNKVYVSKWVDKRPVIMLTTREHPRIIETTNRFGKIVKKPIEVATYNKYMSGVDRSDQMISYYSSPRKTIRWYKKVLFHLLDTAVWNSYYLYKKFVLKNPKYELSSYREELIKKLIDLKENCKGKDLVLDLKKHNSRKHNNPQKNIFADQERKFWGHWPKRQPAPENSKKKYSFLMCKMCSKNKKRVETSYRCIGCPGLPPLCPECFQDYHQILEQQEQ

Uniprot

A0A2H1X1T8   A0A2S2QM22   X1WLJ9   J9LEV6   J9M7T0   X1XG64   + More
A0A1E1WHA1   A0A1B6E873   H9J421   A0A2J7PIT0   A0A1Y1NAK0   A0A1A9ZX35   A0A2J7Q4C7   A8J4L3   A8J4K9   A0A2B4SRV7   A0A2J7QY13   A0A1B6KKZ3   A0A0A9W0B8   A8J4M5   A0A2J7RD45   J9K106   A0A1A9XAR1   A0A1Y1K821   A0A1A9VCE3   A8J4K6   A0A1B6GS29   A0A146MED9   A8J4K3   A0A1B6KP55   A0A2J7R6C2   A0A147BD88   A0A2J7Q7Q8   A0A2J7PU06   A0A2J7QF25   A0A2J7QX07   A0A226D2G8   A0A1A9WYH0   J9K770   J9JV15   S4P9J6   F7FDY8   A0A1A9WYG9   A0A2K6S7R1   A0A1B6E3U1  

Pubmed

19121390    28004739    17934208    25401762    26823975    29652888    + More
23622113   

EMBL

ODYU01012766    SOQ59237.1    GGMS01009616    MBY78819.1    ABLF02004947    ABLF02018406    + More
ABLF02007064    ABLF02023363    ABLF02023369    ABLF02055317    GDQN01004768    JAT86286.1    GEDC01003168    JAS34130.1    BABH01041064    NEVH01024959    PNF16251.1    GEZM01013350    GEZM01013349    GEZM01013347    GEZM01013346    GEZM01013345    GEZM01013342    JAV92637.1    NEVH01018384    PNF23441.1    AB300559    AB300560    AB300561    AB300562    BAF82022.1    BAF82024.1    AB300558    BAF82021.1    LSMT01000021    PFX32631.1    NEVH01009368    PNF33480.1    GEBQ01027849    JAT12128.1    GBHO01042743    GDHC01013469    JAG00861.1    JAQ05160.1    AB300563    BAF82026.1    NEVH01005303    PNF38748.1    ABLF02038619    GEZM01089191    JAV57612.1    AB300557    BAF82020.1    GECZ01004548    JAS65221.1    GDHC01001432    JAQ17197.1    AB300556    BAF82019.1    GEBQ01026738    GEBQ01000704    JAT13239.1    JAT39273.1    NEVH01006795    PNF36382.1    GEGO01007089    JAR88315.1    NEVH01017441    PNF24617.1    NEVH01021212    PNF19822.1    NEVH01015302    PNF27192.1    NEVH01009400    PNF33122.1    LNIX01000039    OXA39353.1    ABLF02021061    ABLF02019804    GAIX01003729    JAA88831.1    GEDC01004717    JAS32581.1   

Proteomes

UP000007819    UP000005204    UP000235965    UP000092445    UP000225706    UP000092443    + More
UP000078200    UP000198287    UP000091820    UP000008225    UP000233220   

PRIDE

H9J421   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A2H1X1T8   A0A2S2QM22   X1WLJ9   J9LEV6   J9M7T0   X1XG64   + More
A0A1E1WHA1   A0A1B6E873   H9J421   A0A2J7PIT0   A0A1Y1NAK0   A0A1A9ZX35   A0A2J7Q4C7   A8J4L3   A8J4K9   A0A2B4SRV7   A0A2J7QY13   A0A1B6KKZ3   A0A0A9W0B8   A8J4M5   A0A2J7RD45   J9K106   A0A1A9XAR1   A0A1Y1K821   A0A1A9VCE3   A8J4K6   A0A1B6GS29   A0A146MED9   A8J4K3   A0A1B6KP55   A0A2J7R6C2   A0A147BD88   A0A2J7Q7Q8   A0A2J7PU06   A0A2J7QF25   A0A2J7QX07   A0A226D2G8   A0A1A9WYH0   J9K770   J9JV15   S4P9J6   F7FDY8   A0A1A9WYG9   A0A2K6S7R1   A0A1B6E3U1  

KEGG

NA   

GO

GO:0003676  

Length:

656

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.12823

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14249

outside

1  -  656

 

 

Pi

205.222643

Theta

148.988721

Tajima's D

1.186448

CLR

1.373349

CSRT

0.712864356782161

Interpretation

Uncertain