SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11024
Annotation
cytochrome_P450_CYP339A1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.623
 

Sequence

CDS
ATGTTAATGTGTCAAGTTCGCCACCTTCAGTTACACGGAAGGTTGCATTTACTATCGAGATTTTTAAGTAGAAGTCCAAATTCAAGTCAAAGTGCGATTCCTCAACAACTATCAAAAGATGATCTGAAACAAGAACATTCACCGATCGGTGCTTTGCCTGTTGAAAACAAAAATACCAACGAAATATTTCCAACAGCAAGAGTTATTCCAATGATGTTGACCAACAAGGAATCTGTCGTGTTACCTTTTGACGATGTACCAGGTCCGAAATCATTGAAGTATTTGTCGACAGTGCGTCAGTATTTATCGGATATCGGCACTCAACTGACTGCTGGTATACTGACATTTGGAGTCAACATAGGAACCTTCATAAATAGTAGAAAGCCTTTGAAAAAGTTTTCCGCTCTATTCGATGAGTACGGTCCTGTGGTACGCTTTATAAGCCCAGTGGGTAATGACATTGTACTGATCAACCACCCGGATCATATTCAAAAAGTGTACACGATAGAAGGTGATTGCCCTGTCAGGTCAACATTGGATTCCCTGGAAAAATACCGTATTGAACACAGAAATCATATCTATGGAGGACTTTACACACTGTAA
Protein
MLMCQVRHLQLHGRLHLLSRFLSRSPNSSQSAIPQQLSKDDLKQEHSPIGALPVENKNTNEIFPTARVIPMMLTNKESVVLPFDDVPGPKSLKYLSTVRQYLSDIGTQLTAGILTFGVNIGTFINSRKPLKKFSALFDEYGPVVRFISPVGNDIVLINHPDHIQKVYTIEGDCPVRSTLDSLEKYRIEHRNHIYGGLYTL

Summary

Similarity
Belongs to the cytochrome P450 family.
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D

Ontologies

Topology

Length:
200
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.02275
Exp number, first 60 AAs:
0
Total prob of N-in:
0.18725
outside
1  -  200
 
 

Population Genetic Test Statistics

Pi
153.275545
Theta
141.775602
Tajima's D
0.103004
CLR
18.647025
CSRT
0.392880355982201
Interpretation
Uncertain
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