Gene

KWMTBOMO11022

Pre Gene Modal

BGIBMGA008531

Annotation

Myb-MuvB_complex_subunit_Lin-52_[Bombyx_mori]

Location

Bomo_Chr18(+):10127369-10129537      View in EpiBrowser

Full name

Protein lin-52 homolog      

Location in the cell

Nuclear   Reliability : 2.381

CDS

ATGGTGAACATGGCCGCGAAACAAAATTCAATCGTTGATGACCAAGCATCATCCGATGATATTCCGTTGACATCCTTAGAGGAAAGTCTTTTCAGTTCGGAGAAGCTTGATAGAGCTTCACCAGAACTATGGCCTGAACAAATTCCGGGAGTATCGGAGTTTGCACCGATGCCAGGCACGCAGGAGCCTTCCTGGAATGAAGGTCTCACAAAACAGGACTACACTTACATGCAACAACTTGGAACACTTACAGTGAGTGGTCTCATCATGGAAGTCAAAAAACTTCATGACTTAGCTTATCAACTGGGCCTGGAAGAAGCTAAAGAGATGACCCGTGGAAAATACTTGAATATATTTGCATCAAAAAGGCAACGGTAG

Protein

MVNMAAKQNSIVDDQASSDDIPLTSLEESLFSSEKLDRASPELWPEQIPGVSEFAPMPGTQEPSWNEGLTKQDYTYMQQLGTLTVSGLIMEVKKLHDLAYQLGLEEAKEMTRGKYLNIFASKRQR

Subunit

Component of the DREAM complex.

Similarity

Belongs to the lin-52 family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  Protein lin-52 homolog

Uniprot

Q2F5Y1   A0A212F9E8   A0A1E1VZF2   A0A0N1IH52   A0A194PID0   I4DPW4   + More
A0A2H1WDD0   A0A1E1WLT3   E2BKR6   A0A0L7QP15   A0A067QZ79   A0A2J7RHI9   A0A0C9RDZ9   E2AD92   A0A195EU27   F4WZF9   A0A195DQB5   A0A3L8DFM4   A0A0C9RKR1   A0A151IIN7   A0A195BXX6   A0A151X246   A0A1B6CA92   A0A2A3ER71   A0A0N0BDK5   A0A088AP62   U5EWG3   A0A1A9W9N9   V5I7X8   Q17CH2   A0A1I8MHW0   A0A023ED62   A0A1I8PCK1   A0A1B6IMU9   A0A026W049   A0A1B6H2U5   A0A1Q3F8J7   A0A182GVP3   B0W8N2   A0A0A0QXK1   A0A0K8TNW4   C3YGP1   A0A1B0AYR0   A0A0L0BRL1   A0A1Y1N6A1   W4Z3C9   A0A1A9UWH0   A0A0A1WTS5   A0A1B0FEB0   A0A1B0AAX3   W8CBQ1   A0A034WRA8   A0A0K8UJ54   A0A1S3HS93   A0A1S3HS91   V4A0L4   A0A087T2J3   A0A3R7M5E4   A0A2I4BJI8   D2A063   R7TWB3   Q4RLT3   S4RF08   T1FXH7   A0A3Q2VUC5   A0A3Q4G764   A0A3P8NAH1   A0A3P9BQD1   E0V9C9   A7RGP2   A0A0P4WDB0   A0A0P4W5Y2   A0A2B4SK19   B9EPT6   A0A3Q2ZHP4   A0A3M6UK18   G3NQX8  

Pubmed

22118469    26354079    22651552    20798317    24845553    21719571    + More
30249741    17510324    25315136    24945155    24508170    26483478    26369729    18563158    26108605    28004739    25830018    24495485    25348373    23254933    18362917    19820115    15496914    25186727    20566863    17615350    20433749    30382153   

EMBL

DQ311291    ABD36236.1    AGBW02009596    OWR50350.1    GDQN01010995    GDQN01003765    + More
JAT80059.1    JAT87289.1    KQ459718    KPJ20238.1    KQ459604    KPI92484.1    AK403811    BAM19954.1    ODYU01007879    SOQ51037.1    GDQN01003061    JAT87993.1    GL448819    EFN83764.1    KQ414842    KOC60360.1    KK853083    KDR11634.1    NEVH01003741    PNF40301.1    GBYB01005196    JAG74963.1    GL438685    EFN68607.1    KQ981979    KYN31407.1    GL888479    EGI60403.1    KQ980612    KYN15105.1    QOIP01000009    RLU19091.1    GBYB01007501    JAG77268.1    KQ977474    KYN02512.1    KQ976398    KYM92796.1    KQ982585    KYQ54355.1    GEDC01026891    JAS10407.1    KZ288193    PBC34004.1    KQ435859    KOX70592.1    GANO01002962    JAB56909.1    GALX01005660    JAB62806.1    CH477308    EAT44049.1    GAPW01006230    JAC07368.1    GECU01019460    JAS88246.1    KK107519    EZA49392.1    GECZ01000788    JAS68981.1    GFDL01011188    JAV23857.1    JXUM01091495    KQ563919    KXJ73067.1    DS231859    EDS39082.1    KM267673    AIU94799.1    GDAI01001782    JAI15821.1    GG666512    EEN60551.1    JXJN01005924    JRES01001467    KNC22677.1    GEZM01011800    JAV93432.1    AAGJ04163243    GBXI01011818    JAD02474.1    CCAG010000559    GAMC01000289    JAC06267.1    GAKP01002065    JAC56887.1    GDHF01025718    JAI26596.1    KB202990    ESO86806.1    KK113093    KFM59332.1    QCYY01002031    ROT73359.1    KQ971338    EFA01741.1    AMQN01011912    KB309179    ELT95270.1    CAAE01015019    AMQM01000166    KB095811    ESO12428.1    DS234991    EEB09985.1    DS469509    EDO49448.1    GDRN01098309    JAI58966.1    GDRN01098307    GDRN01098302    JAI58967.1    LSMT01000076    PFX28832.1    BT057661    ACM09533.1    RCHS01001388    RMX53874.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000008237    UP000053825    UP000027135    + More
UP000235965    UP000000311    UP000078541    UP000007755    UP000078492    UP000279307    UP000078542    UP000078540    UP000075809    UP000242457    UP000053105    UP000005203    UP000091820    UP000008820    UP000095301    UP000095300    UP000053097    UP000069940    UP000249989    UP000002320    UP000001554    UP000092460    UP000037069    UP000007110    UP000078200    UP000092444    UP000092445    UP000085678    UP000030746    UP000054359    UP000283509    UP000192220    UP000007266    UP000014760    UP000007303    UP000245300    UP000015101    UP000264840    UP000261580    UP000265100    UP000265160    UP000009046    UP000001593    UP000225706    UP000264800    UP000275408    UP000007635   

PRIDE

Q2F5Y1   

Pfam

PF10044   LIN52

Interpro

IPR018737   DREAM_LIN52       

ProteinModelPortal

Q2F5Y1   A0A212F9E8   A0A1E1VZF2   A0A0N1IH52   A0A194PID0   I4DPW4   + More
A0A2H1WDD0   A0A1E1WLT3   E2BKR6   A0A0L7QP15   A0A067QZ79   A0A2J7RHI9   A0A0C9RDZ9   E2AD92   A0A195EU27   F4WZF9   A0A195DQB5   A0A3L8DFM4   A0A0C9RKR1   A0A151IIN7   A0A195BXX6   A0A151X246   A0A1B6CA92   A0A2A3ER71   A0A0N0BDK5   A0A088AP62   U5EWG3   A0A1A9W9N9   V5I7X8   Q17CH2   A0A1I8MHW0   A0A023ED62   A0A1I8PCK1   A0A1B6IMU9   A0A026W049   A0A1B6H2U5   A0A1Q3F8J7   A0A182GVP3   B0W8N2   A0A0A0QXK1   A0A0K8TNW4   C3YGP1   A0A1B0AYR0   A0A0L0BRL1   A0A1Y1N6A1   W4Z3C9   A0A1A9UWH0   A0A0A1WTS5   A0A1B0FEB0   A0A1B0AAX3   W8CBQ1   A0A034WRA8   A0A0K8UJ54   A0A1S3HS93   A0A1S3HS91   V4A0L4   A0A087T2J3   A0A3R7M5E4   A0A2I4BJI8   D2A063   R7TWB3   Q4RLT3   S4RF08   T1FXH7   A0A3Q2VUC5   A0A3Q4G764   A0A3P8NAH1   A0A3P9BQD1   E0V9C9   A7RGP2   A0A0P4WDB0   A0A0P4W5Y2   A0A2B4SK19   B9EPT6   A0A3Q2ZHP4   A0A3M6UK18   G3NQX8  

PDB

6C48     E-value=1.6157e-09,     Score=143

KEGG

692891    K21775 protein lin-52 | (RefSeq) Myb-MuvB complex subunit Lin-52

GO

GO:0070176   GO:0006351   GO:0016021   GO:0007049   GO:0006412   GO:0005622   GO:0042626   GO:0016887   GO:0006810   GO:0003824  

PANTHER

PTHR31489  

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01209

Exp number, first 60 AAs:

0

Total prob of N-in:

0.62787

inside

1  -  125

 

 

Pi

169.91593

Theta

180.746235

Tajima's D

-0.133314

CLR

1.751443

CSRT

0.337283135843208

Interpretation

Uncertain