SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11019
Pre Gene Modal
BGIBMGA008530
Annotation
PREDICTED:_uncharacterized_protein_LOC105841986_isoform_X2_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.299
 

Sequence

CDS
ATGTCTCTAAGTGGTCGGCGGAAACCCCCGGGTGGAGTAACGCTCATCGCAGGCGTATGGGATCTGAACCAGAGGTCACGCGCTAAAACTCGTGTACCTGCTATACATATACACAAAGAATACACGAATGAGCATTTGGACCGTGATCTTGCTATTCTTACTTGGCGACTACCATTAAAACTGGGCCCAAACATCCAACCAGCTTGCCTCGGTGATGTAAATTTAGGAGCAGATTGCATGATCTTCGGATGGAGTGGTTTTGATCAAGCAATAAAGTCAAGGTCCAAATGGCAAAGGGTAACGACCGGCGATTGCGACGATATCGTAACCTCCTCCGAGCAAGAGATTCCAAGAACAGCATTCTGTGCTAAATTCCATTCTCGTCGCACCGTGAGCGGTATAGGAGGCTCCTTGATTTGTAACGTGGACGGTCGCTGGTCTTTAGTCGGCGTTGCCGTGTCTCGTCACATTTCGTTGGTGTTACTACCAGCTCGACCTTGGGGTTTGAAGGCTGGCAACTTTATAGACGGAATTTAA
Protein
MSLSGRRKPPGGVTLIAGVWDLNQRSRAKTRVPAIHIHKEYTNEHLDRDLAILTWRLPLKLGPNIQPACLGDVNLGADCMIFGWSGFDQAIKSRSKWQRVTTGDCDDIVTSSEQEIPRTAFCAKFHSRRTVSGIGGSLICNVDGRWSLVGVAVSRHISLVLLPARPWGLKAGNFIDGI

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
ODYU01010292    SOQ55297.1    AGBW02013933    OWR42547.1    KQ459718    KPJ20236.1    + More
KQ459604    KPI92487.1    HAAD01002954    CDG69186.1    KK852794    KDR16418.1    KB017697    EPY75934.1    RCHS01001248    RMX54502.1    BDGG01000001    GAU90294.1    GAU90293.1    JH431820    ABJB010271822    ABJB010614650    DS638984    EEC01712.1    AMGL01045758    KB202284    ESO90979.1    GANP01005967    JAB78501.1    JH432147    GAU88765.1    FX985344    BAX07357.1    GDIQ01140981    JAL10745.1    GDIQ01125389    JAL26337.1    GDIQ01038971    JAN55766.1    GDIQ01059507    JAN35230.1    GDIQ01041874    JAN52863.1    GDIQ01234453    JAK17272.1    GDIQ01161232    JAK90493.1    GDIQ01157880    JAK93845.1    GDIQ01127090    JAL24636.1    HAAD01005238    CDG71470.1    GDIQ01061558    JAN33179.1    GDIQ01110693    JAL41033.1    GDIQ01125387    JAL26339.1    GDIQ01048379    JAN46358.1    DS469965    EDO30908.1    GDIQ01110694    JAL41032.1    GDIP01207989    JAJ15413.1    GDIQ01229301    JAK22424.1    GDIQ01125386    JAL26340.1    GDIQ01231549    JAK20176.1    GDIQ01229300    JAK22425.1    GDIQ01120842    JAL30884.1    GDIQ01077648    JAN17089.1    GDIQ01112386    JAL39340.1    GDIQ01140982    JAL10744.1    GDIP01201101    JAJ22301.1    GDIQ01144186    JAL07540.1    GDIQ01127091    JAL24635.1    GDIQ01038972    JAN55765.1    GDIQ01176858    JAK74867.1    GDIP01030108    JAM73607.1    GDIQ01215911    JAK35814.1    CABD030081773    AAEX03003454    AAEX03003455    GDIQ01136440    JAL15286.1    GDIQ01123440    JAL28286.1    GDIQ01136439    JAL15287.1    GDIQ01081361    JAN13376.1    GDIQ01242750    JAK08975.1    GDIQ01191855    JAK59870.1    GDIQ01152938    JAK98787.1    GDIQ01123441    JAL28285.1    GDIQ01127048    JAL24678.1    GDIQ01079660    JAN15077.1    GDIQ01112387    JAL39339.1    GDIQ01241304    JAK10421.1    GDIQ01038970    JAN55767.1    GDIQ01063308    JAN31429.1    GDIQ01110692    JAL41034.1    GDIQ01131043    JAL20683.1    GDIQ01242749    JAK08976.1    GDIQ01063307    JAN31430.1    GDIQ01125388    JAL26338.1    GDIQ01123443    JAL28283.1    GDIQ01102555    JAL49171.1    GDIQ01129742    JAL21984.1    GDIQ01138941    JAL12785.1    GDIQ01186510    JAK65215.1    GL194201    EFB25343.1    GDIQ01196511    JAK55214.1    LSMT01000021    PFX32561.1    OUUW01000001    SPP74314.1    QCYY01001411    ROT78226.1    GDIQ01241305    JAK10420.1    ACTA01140837    SPP74313.1    GDIQ01140979    JAL10747.1   
Pfam
PF00089   Trypsin        + More
PF01549   ShK
PF00431   CUB
PF00594   Gla
PF00530   SRCR
PF00629   MAM
PF00090   TSP_1
PF18322   CLIP_1
PF15494   SRCR_2
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
IPR003582   ShKT_dom       
IPR033116   TRYPSIN_SER       
IPR035914   Sperma_CUB_dom_sf       
IPR000859   CUB_dom       
IPR035972   GLA-like_dom_SF       
IPR017857   Coagulation_fac-like_Gla_dom       
IPR000294   GLA_domain       
IPR013320   ConA-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR036772   SRCR-like_dom_sf       
IPR001190   SRCR       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR017448   SRCR-like_dom       
IPR000998   MAM_dom       
IPR012224   Pept_S1A_FX       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR041515   PPAF-2_Clip       
IPR017327   Peptidase_S1A_TMPRSS13       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
SUPFAM
SSF50494   SSF50494        + More
SSF49854   SSF49854       
SSF57630   SSF57630       
SSF49899   SSF49899       
SSF48726   SSF48726       
SSF56487   SSF56487       
SSF82895   SSF82895       
PDB
6I44     E-value=0.000164472,     Score=102

Ontologies

Topology

Length:
178
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07135
Exp number, first 60 AAs:
0.00035
Total prob of N-in:
0.07724
outside
1  -  178
 
 

Population Genetic Test Statistics

Pi
234.599058
Theta
194.440743
Tajima's D
0.552058
CLR
0.199682
CSRT
0.531123443827809
Interpretation
Uncertain
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