SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11010
Annotation
PREDICTED:_uncharacterized_protein_LOC101743267_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.15
 

Sequence

CDS
ATGCCTCAGTCCCCTTCACCTCGTCTGCGTCATTACAGGACAATGACCGCAATATGTTTCGTTTGCAACCTCCCGATACTGTCCCACCAAGTGGGGCTTGTGTGGGCCGGCGGCAACGGCTGGGACGAGCTGACCCGTTCCACGCTAGAAGAGTCCACACTAAGGCAAAGACTCGGCAGCCGAAGAGATTCTGCGGCGCAAGTATCCTGTCTATCGCCGCCAGAGCCCGACGTCTCAGATCAACCCAGAGGTGGACCTCGTCGTCGTCGTTCATCCCTGGCCCAGCTGACTGACATTCTCCGTGAATGGGGAGGCGGCGGTGCTCCCAGAAGACAGAGAGCCCCACTCTCTAGAAGAGAAACACTTGCCGACCTAGCTCGATCCCTGCCGTGGACACGATCCGAACCCCCACCACGTCGACGGCGTGATTCATCAGCTGATTCTGGAATTAAGTCCATGGCTTCCAAGCGTCGTGATTCGAAATCGGCTCAGCCAGATTTCCGAGCGGAATTTTCGAATTATTTTGAACGAAGGGATTCAACTATTATTATACCAACAAAAGATAAACGTATGAAACGTCGTAGTTCTGAAGAAAAGGAACGTAGAGATTCAGTTGATGGTACTAGACATAGACGTGATTCCATAATTGCTCAGCCACCACGCATTGTAGCAACACACAGGAAGCGACGCAGCTCTCCACCTCCACCTGCTGCACCATCTTTCGTAGAAGTATCTTCCGATCCGGGTCCTTCGACTCAACCACCATCGGTAACCGTAGTCACTGTCCACGAACCAAGCCGATCTGACGGAGAATGCCACCCTATGACTATGCCTACGATTATAACGTCGGCTGTGACACCATCACCGACCTCACCAACAGTACCGACGACCAGCACATCGCAGTCAGTTCAAACAAGCCAAGGCACTCAAGCTGCACAGACTAATCAAGCGACCACTCCCGTTGGAAAAGCTCCGTTAAATTTGGGAGGTCGCCGAGACTCGACTACACAGTGTGGTCGGGCGAGACGAGATTCTCGTGCAGCTGCAAGCCCGGAACGCCGACTGGGCAGACTACAAAGACAAGCTACAGCATTCGATGATCCGACTGGTCCTCCTGGAGCCAGGCGAAGGGACTCTGGTCCATCCTTAGGTCCCGATGATGAAGGAAGAGTTAGAAGAGATTCTCTTAGTCCTGATTCTGCTGCTCGTCCAAGACGTGACCGTTCACAATTAAGTCCCGACCGGGCAGGTGGTGGGGAATTGAGTCCTTCGGCAGCCCGTCGCCGAAGCAGATTACGGCGTCAAGCTTCTTGTGCAAGAATGGGTAGGGCTAGAAGCCCAGAATCCAGTTCATGCTCCAGCCGGGATCCAAGCCCGTGTGCACGTCCTCCGGAGCGCACTATGATCCGGAGGCAATCGACAACAGAAGAAATATTAATTGCTCGCGGTTTTCGACGACAATCTACAACCGAAGAGATGATAAGGTGCCGAAACTTTAGACGACAAAGCTCACAAAGCGATGACGCTTGCATGCGAGCACGCGGTCGACGCGATTCATCAACACAAATATTGGACGGAACGATAGGAACTATGACTGTTGAGACAACAAGCACATTCTTCGATTCCAGCACGCAAACAGAACCGTCTCCGCTGTATGACAACAACCACTATCATGAGGAATGTCTCCGTTGCAACTCCTGCGGACTGAATCTTACTGGACCCAATCAGAAGCGCGCACGCCGTTTCAAAAATCATATTCTGTGCGACCTGCACTTCGCCGACGTAGCGCTGATGGAGTGCAGCGATTTCATGCAGCAACTACGCAGCTTCAAACCACAATCGCTGGGCTGCGCCGTCGCTAGGCGCAAGTCTTCAACTACCCTCATATTCCCGTTGCCACCTCAGGCCTGTTCAGATGAATTTTGCGAGGAGTACCCTCACAATCTGATACCGACACCCGGCTACTGGATCGAGTGCTCGCGTCAGAAGATAGCGAGCGATACTATTTGGGACGAGTCTGAATCCGAACATGACAGTGGACCCGATCGTGAAAATGCAGAAGATCGCCACGGAAGGTCTGGCTCTTTGGATGAAGCAGCTGAAGACAGCAGCAACGGAGGCAGCACGCCCAAGAAGAAAACTGTTATTGAAGAACAATGGGAAAGATCGGGAGGCTTCGAACTTACCTCAGTCGAGCAGGAAACATACGAAAAGTACTTCTACGGCACAGAACATTGGAACTATTTTACTAATGACGAGGATCTCGGACCCGTCATACTTTCTATTAAACAGGAGACACTCAACTCTAGAGATCAGTTCAGGATCCTGGTCCGAGCGATTAGCTACACAGTTCATGGACTAATTCCCGCATCGTGCGTCTTCGCTGACCGTTACAATCGTGAAGAAGTGGTCCGCTCTCTTGGCAAGGAAGTCAACATCAACCCACCACTCATGTTGGGACAGCTGCCTGATACTCCCGAAGAATTACTGAAACTTGATCAGGTGTTCATAAAGTCGGAATTGAAAGTAGGAGTTATCTACGTAAAAGAAAATCAGTACACGGAAGAAGAAATACTGGACAACAACGAGAATTCTCCTTTATTCGAAGAATTCTTACAGGTCATGGGAGAGAAAGTACGGCTTAAAGGATTCGATAAATACAAAGGCGGCCTCGACACAGTACACGACTTGACTGGCTTGTATTCAGTCTACACCAACTGGAGGAGTATCGAGATAATGTTTCACGTCTCCACTCTCCTGCCTTATGAGAGACATGATCCTCAGAAGCTGCAAAGGAAACGCCATATAGGCAATGATATCGTATGTGTCGTCTTCCTTGAAGCGGATAATACATCCTTCTCACCGGCATGTATCAAGAGCCACTTCTTACATACATTCATTTTGGTTCGAGTGTCGGCCAAGATTAAACGTCGACCGACAAGGTACGAAGTATCTGTAGTGACGCGGGACGAAGTGGGTGCCTACAAGCCATACCTTTGGGAACAAAGCGTCTTTGATAAAGGTCCCATGTTCAGAGAATGGTTACTAACAAAAATTGTGAATGGCGAAAGAGCGTCGTACTCGGCACCGAAATTTGCAAGAATGCAAGAAAGAACACGCAGTCAGATGCTGGAAGACATTGTCGCTAATCTACAGAATCACGCAGAAACGGGGCAAATACCGAAGCCTTATCGAAGAGGTTCTTGGCGGCCAATAGGGCATATGAGACCCTCTTCGCCTCTTCTAGATTCCGTGAGAGATCAATTCGAAGATTATGATCAACTTGCTAGAGACTTCACCCGAGTTTTCCTGAATAATGAATTGAACACGGCAACAAACGCACAACTTTTCGACGTCGTTTTTCTTGTGGGGCAATCAAAACAGAAAACCAAATTTATTGGAGTACGGGCCATCCTTGGCGTAAGAAGCAGGGTTTTCCAAGAGATGCTGTACGGCATTCAGACAGGCTTCGGGTCTCCTCAAGTTCCCGTTGCCGAGTTACTAGCTCGGCCAGCGCCTACACTTTTGTCTCCAACTCCTGCGAGGCAGAAGAGCAGCAACTTCTTGCAAGTTCCGGACATCGAATCACCAAGGCCAAAAAGCGTGCCAAGTTCCCCGATGGTGAAGCGCGCGTTCTCCCGCCTCGGTACCATCACGGCGGGCTGGGGACGATCCATCAGGAAACAACACTCGCAACTAAATGCTGATGACAAGAAAAGATGGGCCAGTTCCCAAGATTGCTCCAGTAATTATATTTTGTTTAATTAG
Protein
MPQSPSPRLRHYRTMTAICFVCNLPILSHQVGLVWAGGNGWDELTRSTLEESTLRQRLGSRRDSAAQVSCLSPPEPDVSDQPRGGPRRRRSSLAQLTDILREWGGGGAPRRQRAPLSRRETLADLARSLPWTRSEPPPRRRRDSSADSGIKSMASKRRDSKSAQPDFRAEFSNYFERRDSTIIIPTKDKRMKRRSSEEKERRDSVDGTRHRRDSIIAQPPRIVATHRKRRSSPPPPAAPSFVEVSSDPGPSTQPPSVTVVTVHEPSRSDGECHPMTMPTIITSAVTPSPTSPTVPTTSTSQSVQTSQGTQAAQTNQATTPVGKAPLNLGGRRDSTTQCGRARRDSRAAASPERRLGRLQRQATAFDDPTGPPGARRRDSGPSLGPDDEGRVRRDSLSPDSAARPRRDRSQLSPDRAGGGELSPSAARRRSRLRRQASCARMGRARSPESSSCSSRDPSPCARPPERTMIRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDACMRARGRRDSSTQILDGTIGTMTVETTSTFFDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNHILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCEEYPHNLIPTPGYWIECSRQKIASDTIWDESESEHDSGPDRENAEDRHGRSGSLDEAAEDSSNGGSTPKKKTVIEEQWERSGGFELTSVEQETYEKYFYGTEHWNYFTNDEDLGPVILSIKQETLNSRDQFRILVRAISYTVHGLIPASCVFADRYNREEVVRSLGKEVNINPPLMLGQLPDTPEELLKLDQVFIKSELKVGVIYVKENQYTEEEILDNNENSPLFEEFLQVMGEKVRLKGFDKYKGGLDTVHDLTGLYSVYTNWRSIEIMFHVSTLLPYERHDPQKLQRKRHIGNDIVCVVFLEADNTSFSPACIKSHFLHTFILVRVSAKIKRRPTRYEVSVVTRDEVGAYKPYLWEQSVFDKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDIVANLQNHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLARDFTRVFLNNELNTATNAQLFDVVFLVGQSKQKTKFIGVRAILGVRSRVFQEMLYGIQTGFGSPQVPVAELLARPAPTLLSPTPARQKSSNFLQVPDIESPRPKSVPSSPMVKRAFSRLGTITAGWGRSIRKQHSQLNADDKKRWASSQDCSSNYILFN

Summary

Pfam
PF00651   BTB        + More
PF02145   Rap_GAP
PF00241   Cofilin_ADF
Interpro
IPR035974   Rap/Ran-GAP_sf        + More
IPR000331   Rap_GAP_dom       
IPR000210   BTB/POZ_dom       
IPR001781   Znf_LIM       
IPR011333   SKP1/BTB/POZ_sf       
IPR029006   ADF-H/Gelsolin-like_dom_sf       
IPR002108   ADF-H       
SUPFAM
SSF111347   SSF111347        + More
SSF54695   SSF54695       
Gene 3D
PDB
1SRQ     E-value=6.35141e-71,     Score=684

Ontologies

Topology

Length:
1255
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.37701
Exp number, first 60 AAs:
1.37307
Total prob of N-in:
0.06491
outside
1  -  1255
 
 

Population Genetic Test Statistics

Pi
227.619938
Theta
173.790131
Tajima's D
0.929704
CLR
0.35515
CSRT
0.63846807659617
Interpretation
Uncertain
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