SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11007  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008525
Annotation
PREDICTED:_glutaredoxin-related_protein_5?_mitochondrial-like_[Plutella_xylostella]
Full name
Glutaredoxin      
Location in the cell
Cytoplasmic   Reliability : 2.203
 

Sequence

CDS
ATGAAAGGCGTACCGGACGCGCCAAGATGCGGTTTCAGTAATGCTGTTGTGCAGATTATGAGGATGCATGCAGTTCCGTACGAGAGCCATGATGTGTTGAGTGATGAAAATCTTAGACAAGGTATAAAAGATTATTCGAATTGGCCTACAATACCTCAAGTCTTTATCAATGGTGAATTTGTTGGTGGTTGTGACATAATGCTGCAGATGCACCAATCTGGTGAACTCATTGAGGAACTGAAGAAAGTGGGTATAAAAAGTGCACTTTTAACAGCTGAAGAGGCAAAGCAAGGGGAGAAGAAAAATTAA
Protein
MKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGEFVGGCDIMLQMHQSGELIEELKKVGIKSALLTAEEAKQGEKKN

Summary

Similarity
Belongs to the glutaredoxin family. Monothiol subfamily.
Feature
chain  Glutaredoxin
EMBL
BABH01002131    NWSH01002874    PCG67397.1    KU356685    AMW64460.1    AK401722    + More
KQ459604    BAM18344.1    KPI92494.1    GAIX01003758    JAA88802.1    ODYU01005498    SOQ46414.1    KQ459765    KPJ20008.1    RSAL01000170    RVE45189.1    AGBW02012451    OWR45046.1    JTDY01000503    KOB76870.1    KQ971338    EFA02650.1    AAZX01002628    GL453666    EFN75709.1    CH480847    EDW51043.1    CM000366    EDX17919.1    AE014298    AY084192    AAF48392.2    AAL89930.1    CM000162    EDX01704.1    JH431806    CH933812    EDW06057.2    GFDL01000389    JAV34656.1    CH954180    EDV47081.1    AJWK01010098    APGK01051454    KB741190    KB632094    ENN73028.1    ERL88721.1    CH964291    EDW86523.1    BT128133    AEE63094.1    CH940653    EDW62820.1    CH916371    EDV91991.1    GL443213    EFN62391.1    AXCM01001791    GECU01023039    JAS84667.1    AJVK01019389    CP012528    ALC48868.1    PYGN01000803    PSN40619.1    LBMM01012724    KMQ86029.1    GECZ01002562    JAS67207.1    ATLV01004135    KE524190    KFB35037.1    KQ981153    KYN08911.1    AXCN02000010    APCN01000368    AAAB01008859    EAA07977.3    IACF01002960    LAB68592.1    NNAY01000171    OXU30335.1    KQ982548    KYQ55220.1    KQ981906    KYN33238.1    GBHO01022874    GBRD01012341    GDHC01008536    JAG20730.1    JAG53483.1    JAQ10093.1    ADMH02001952    ETN60332.1    OUUW01000003    SPP78684.1    GL887888    EGI69671.1    KQ976424    KYM88421.1    ADTU01012955    AJVK01059064    CH477208    EAT47763.1    GGFK01009351    MBW42672.1    NEVH01006580    PNF37641.1    KQ435821    KOX72462.1    KQ435078    KZC14486.1    JXUM01034776    GAPW01005651    GAPW01005650    KQ561036    JAC07947.1    KXJ79939.1    GEMB01005694    JAR97628.1    CH479242    EDW37634.1    LJIJ01000032    ODN04959.1    KK121026    KFM79596.1    CH902630    EDV38461.1    CH379063    EAL32570.2    ABJB010596121    DS968760    EEC19883.1    GADI01001573    GANP01009349    JAA72235.1    JAB75119.1    IAAA01016965    LAA05826.1    GANP01013476    JAB70992.1    GGFK01009397    MBW42718.1    GGFK01009350    MBW42671.1    JX844655    JX844658    AFU83107.1    AFU83110.1    GGFJ01010394    MBW59535.1    GFTR01002204    JAW14222.1    GEFM01001754    JAP74042.1    KZ288215    PBC32569.1    IAAA01016966    LAA05829.1    QOIP01000007    RLU20174.1    GEFM01000646    JAP75150.1    GDRN01093659    JAI59849.1    JRES01000359    KNC31962.1    GECL01001275    JAP04849.1    GEBQ01005908    JAT34069.1    GAMD01002657    JAA98933.1    GGFJ01010393    MBW59534.1    KQ414735    KOC62320.1    KQ978251    KYM95990.1    JO842521    AEO34138.1   
Pfam
PF00462   Glutaredoxin
Interpro
IPR033658   GRX_PICOT-like        + More
IPR014434   Monothiol_GRX       
IPR002109   Glutaredoxin       
IPR004480   Monothiol_GRX-rel       
IPR036249   Thioredoxin-like_sf       
IPR033599   TAF1B/Rrn7       
SUPFAM
SSF52833   SSF52833       
PDB
2MMZ     E-value=7.24579e-36,     Score=370

Ontologies

Topology

Length:
102
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00624
Exp number, first 60 AAs:
0.00424
Total prob of N-in:
0.29776
outside
1  -  102
 
 

Population Genetic Test Statistics

Pi
283.762643
Theta
200.132103
Tajima's D
1.315339
CLR
0.955323
CSRT
0.743162841857907
Interpretation
Uncertain
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