SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11003
Pre Gene Modal
BGIBMGA014328
Annotation
PREDICTED:_nitrogen_permease_regulator_3-like_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.435
 

Sequence

CDS
ATGGAAGTTAATCCATTAAACATATTTTTTGTGAAATCTGACAGCAAGGGCGATAGGCTTTTGTTTAGATATCCATATACGATAGAACATAAAGGTGAGAATAAACAGAAGAGATGTGGCAGGCACAACCCTTACGCAATTACTTCAACAGAGGATTTACTCCAGAATTCACAATCTCAAACGTCGAATATTTGCAAAGGTCAACTAAGTGGTTTTACTGATGAAATGCTTTCAACACTGTTTGCTGTAAAAGCAGAATTATGTAACAAGAAATTTGAATTAAAAGTCAATGATGTGAGGTTTGTTGGTCATCCAACATTGCTGCCCTACCGAGCAAATAAAGATGATACTGCTGCTATGATTCTCATAAATATAGTTTTTGCTTTACAAGCCTCTGCCAGTCATTCTATAGTAAAATGTTATTATGATTTGAGTAAAAGGCTGGGTAAAGCACTGAGACATGAAGAAGAAAGGTGTTCATATTTAACAGAAGAAATGAAAATTATGCTAGCTGCTCATGATGAAGTGAATGAGAGGAACGACAGTGAAATTAATGGTGATAATGAAGAAGAGGAAGAGAATCTCCGACATTCTGTTAGTTCTACAACATATAGTGTAGATAATGGCCTTGAGGGAGGCCCAATGTCTGCCTACCACTTAATATTACAAAGGAGTTCATTAGCTAGGTCCATGAAATCTGTCTTTGAGGAACTAAGTAGCACAGGCATAGTTCAAGTACGTGTAAATAAATGGGTGCTTCTATCCTTCTGTTTGCCCCACAAAGCCCATCAAATTCACAACAGAGGATTGATAATAGAACCGGAAACAATAGACAAATGTTTGCAAAAACTGAGGCCATACCACGGCATGCTACTACTTGTGAATCCAAATGATTTGTTGGCGTCGATACCACTGGATGGCAGCTCTGCATTGCTGCGACTTATTAAACTATATAGCCCTCTAAAAAGTCTTCAAACACTGGCCATAGAAGCGGATCTGACATTCAAACAGGTCTCTCAACTAACTGGACATTTAGTGTATTGGGCTAAAGCGACGGTGATCTATCCATTGTGCGAAGGGAATGTATACGTTGTGGCCCCCGGCGCGAATATTCACATACATTCACCTCTTGTCGATGAATTCGCCAAGGAGTTTCCTGGGCTATGTTTATTGCAAATGCTCAGTGAGTTCTCTCTGCCGGCTCCGCTGTGGTACATATCGCGGAGCGCGGGCGGCGGGTGCGGGGGCTCGGCGCGGCTGGCCCGCTGCGTGGCGTGGCTGTTGCAACGCAGACTCTTGCTGCAGCTCCATACGTACGTGCAGTTCAATTCGCCGCATTGGGGACGTGATGCAGACGGCAAAGAGTATTACTGCGAAAAGCACGACATATACAACAGATCGTGCAGCGTGTCGTTCTCCTCGCTGAACCAAATGCAACTCAACGTACCTGAGCCCGTCGAGCCCAGGGACAACACCATATTCCCCGATTCGGACGAAGACTACCCCACCGAAAACAATCTCAATCAAACGGATTTCTCTCACACCAGACCAATAATAATCGATTCGGATCGAAAGAAACACGAGAAATTTCACGAAAATGATTCGGCGAATCATTCGTTCGACGACGGCATCGACGTTGTCGACGGAATCAAAACGAACGGTTGCGATTACGATAATCAAATTGATAAACAAAAGAAACACGGCAACTCTGTGGACAGCGGCATCTCTAACAACATAAACGGCACGGCCGGTAATAGTATAGAGGCGAACGGCAACGACGCTAGTCACGCTGAACTCTCCAATGGCGAAACCTTGACCTCGGATGATAAATCGAAAGGCCTACCTTCGAGGCTGTCGGATTTGTCGCTGAAGGACAACGACAACGCCGCCAACAACACGAGCAGCGACGAGGACCGGTTCGAGAGCGACCAGGACGTCTCGCCGCGCACCAAAACGAACGGCTTGACGAACGGATCGGAAAAGAAGAACGGGGTTTCTTTAAATTTGAAACTGCAAAGCGAAATGAGTTTCCAGCCGCCGACGGTGTGGGGCGGGTCGGCCAGCTGTGACGTCACCGACGCGTGCCGAGCGCCCGCCGAGCCGGAGTCCACCGAGTCCCTACTGCACACGTTCACGGCAGAGGAGCGAACCGTATTGTCCCACATTCCCGCCTCGAACAACACTGACGACTTACTGCTGCTAGCCCAGCTACATAAGAAAGGCTATTTCCGCGGCGAGCAGCATTTAGAAGAGATCATGTTTATGGAGAACGTCAGTCGTTCACAGCTAATGCAGCTTCTAGACAAATTCAAAGATGTACTCATCACCTTTGAAACAGAAGATCCCGCTGTGGCTATGCTCTATCCATATCAATAG
Protein
MEVNPLNIFFVKSDSKGDRLLFRYPYTIEHKGENKQKRCGRHNPYAITSTEDLLQNSQSQTSNICKGQLSGFTDEMLSTLFAVKAELCNKKFELKVNDVRFVGHPTLLPYRANKDDTAAMILINIVFALQASASHSIVKCYYDLSKRLGKALRHEEERCSYLTEEMKIMLAAHDEVNERNDSEINGDNEEEEENLRHSVSSTTYSVDNGLEGGPMSAYHLILQRSSLARSMKSVFEELSSTGIVQVRVNKWVLLSFCLPHKAHQIHNRGLIIEPETIDKCLQKLRPYHGMLLLVNPNDLLASIPLDGSSALLRLIKLYSPLKSLQTLAIEADLTFKQVSQLTGHLVYWAKATVIYPLCEGNVYVVAPGANIHIHSPLVDEFAKEFPGLCLLQMLSEFSLPAPLWYISRSAGGGCGGSARLARCVAWLLQRRLLLQLHTYVQFNSPHWGRDADGKEYYCEKHDIYNRSCSVSFSSLNQMQLNVPEPVEPRDNTIFPDSDEDYPTENNLNQTDFSHTRPIIIDSDRKKHEKFHENDSANHSFDDGIDVVDGIKTNGCDYDNQIDKQKKHGNSVDSGISNNINGTAGNSIEANGNDASHAELSNGETLTSDDKSKGLPSRLSDLSLKDNDNAANNTSSDEDRFESDQDVSPRTKTNGLTNGSEKKNGVSLNLKLQSEMSFQPPTVWGGSASCDVTDACRAPAEPESTESLLHTFTAEERTVLSHIPASNNTDDLLLLAQLHKKGYFRGEQHLEEIMFMENVSRSQLMQLLDKFKDVLITFETEDPAVAMLYPYQ

Summary

Pfam
PF03666   NPR3
Interpro
IPR005365   Npr3       
PDB
6CET     E-value=5.41571e-83,     Score=787

Ontologies

Topology

Length:
791
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14408
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00676
outside
1  -  791
 
 

Population Genetic Test Statistics

Pi
244.81313
Theta
180.711133
Tajima's D
1.236081
CLR
0.011914
CSRT
0.72186390680466
Interpretation
Uncertain
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